BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os02g0726500 Os02g0726500|J033029I05
(102 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os02g0726500 Protein of unknown function DUF246, plant fami... 208 8e-55
Os06g0284200 Protein of unknown function DUF246, plant fami... 186 4e-48
Os03g0328100 Similar to Axi 1 (Auxin-independent growth pro... 149 3e-37
Os01g0168600 Similar to Auxin-independent growth promoter-l... 147 2e-36
Os03g0169000 Protein of unknown function DUF246, plant fami... 132 5e-32
Os12g0190100 Similar to Auxin-independent growth promoter-l... 120 2e-28
Os09g0442900 Similar to Axi 1 (Auxin-independent growth pro... 117 2e-27
Os06g0219400 Protein of unknown function DUF246, plant fami... 109 4e-25
Os05g0451900 Similar to Axi 1 (Auxin-independent growth pro... 101 1e-22
Os01g0851100 Similar to Axi 1 (Auxin-independent growth pro... 98 1e-21
Os04g0551300 Similar to Growth regulator like protein 87 3e-18
Os12g0425600 Protein of unknown function DUF246, plant fami... 76 4e-15
Os02g0158800 Protein of unknown function DUF246, plant fami... 75 8e-15
Os11g0481200 Protein of unknown function DUF246, plant fami... 72 1e-13
Os09g0412200 Protein of unknown function DUF246, plant fami... 66 6e-12
>Os02g0726500 Protein of unknown function DUF246, plant family protein
Length = 102
Score = 208 bits (529), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 102/102 (100%), Positives = 102/102 (100%)
Query: 1 IHFVQILPLIRKHKVLHLNRTDARLANNGLPLDVQKLRCRVNFGSLKFTSDIEELGRRVI 60
IHFVQILPLIRKHKVLHLNRTDARLANNGLPLDVQKLRCRVNFGSLKFTSDIEELGRRVI
Sbjct: 1 IHFVQILPLIRKHKVLHLNRTDARLANNGLPLDVQKLRCRVNFGSLKFTSDIEELGRRVI 60
Query: 61 RLLRQNGPFLVLHLRYEMDMLAFSGCTEGCTREEADELTRMR 102
RLLRQNGPFLVLHLRYEMDMLAFSGCTEGCTREEADELTRMR
Sbjct: 61 RLLRQNGPFLVLHLRYEMDMLAFSGCTEGCTREEADELTRMR 102
>Os06g0284200 Protein of unknown function DUF246, plant family protein
Length = 508
Score = 186 bits (471), Expect = 4e-48, Method: Composition-based stats.
Identities = 84/98 (85%), Positives = 95/98 (96%)
Query: 5 QILPLIRKHKVLHLNRTDARLANNGLPLDVQKLRCRVNFGSLKFTSDIEELGRRVIRLLR 64
QILPLIRK+KVLHLNRTDARLANNGLP+++QKLRCRVN+ SL+FTS IEELG+RVIR+LR
Sbjct: 210 QILPLIRKYKVLHLNRTDARLANNGLPMEIQKLRCRVNYASLRFTSQIEELGKRVIRILR 269
Query: 65 QNGPFLVLHLRYEMDMLAFSGCTEGCTREEADELTRMR 102
QNGPFLVLHLRYEMDMLAFSGCT+GC+ EEAD+LTRMR
Sbjct: 270 QNGPFLVLHLRYEMDMLAFSGCTQGCSNEEADDLTRMR 307
>Os03g0328100 Similar to Axi 1 (Auxin-independent growth promoter)-like protein
Length = 498
Score = 149 bits (377), Expect = 3e-37, Method: Composition-based stats.
Identities = 68/98 (69%), Positives = 82/98 (83%)
Query: 5 QILPLIRKHKVLHLNRTDARLANNGLPLDVQKLRCRVNFGSLKFTSDIEELGRRVIRLLR 64
QILPL+RKHKV+ +RTD+RLANNGLPL +QKLRCRVN+ +L+F IE LG+++I LR
Sbjct: 194 QILPLVRKHKVVRFSRTDSRLANNGLPLKLQKLRCRVNYNALQFAPSIEALGKKMISALR 253
Query: 65 QNGPFLVLHLRYEMDMLAFSGCTEGCTREEADELTRMR 102
+ G F+VLHLRYEMDMLAFSGCT GC+ EE ELTRMR
Sbjct: 254 KTGSFIVLHLRYEMDMLAFSGCTHGCSDEETAELTRMR 291
>Os01g0168600 Similar to Auxin-independent growth promoter-like protein
Length = 447
Score = 147 bits (370), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 66/101 (65%), Positives = 85/101 (84%)
Query: 2 HFVQILPLIRKHKVLHLNRTDARLANNGLPLDVQKLRCRVNFGSLKFTSDIEELGRRVIR 61
+ ++L L RKHKV+H N+TDARLANNGLP+ +Q+LRCRVNF +L+FT IE LGR++I
Sbjct: 166 YLKRVLRLARKHKVIHFNKTDARLANNGLPVKLQRLRCRVNFEALRFTPQIEALGRKLIS 225
Query: 62 LLRQNGPFLVLHLRYEMDMLAFSGCTEGCTREEADELTRMR 102
L+++G F+VLHLRYEMDML+FSGCT GC+ EE +ELTRMR
Sbjct: 226 TLQKSGQFVVLHLRYEMDMLSFSGCTHGCSDEETEELTRMR 266
>Os03g0169000 Protein of unknown function DUF246, plant family protein
Length = 470
Score = 132 bits (332), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 61/98 (62%), Positives = 75/98 (76%)
Query: 5 QILPLIRKHKVLHLNRTDARLANNGLPLDVQKLRCRVNFGSLKFTSDIEELGRRVIRLLR 64
QILPL K+ V+H N+TDARLANNG+ +Q LRCRVNF +LKFT IE LG ++++ L+
Sbjct: 165 QILPLFSKYSVIHFNKTDARLANNGISTQLQLLRCRVNFHALKFTPQIEALGNKLVQKLQ 224
Query: 65 QNGPFLVLHLRYEMDMLAFSGCTEGCTREEADELTRMR 102
G F LHLRYEMDMLAFSGC G ++EEA+EL RMR
Sbjct: 225 AKGSFAALHLRYEMDMLAFSGCNHGLSQEEAEELKRMR 262
>Os12g0190100 Similar to Auxin-independent growth promoter-like protein
Length = 495
Score = 120 bits (301), Expect = 2e-28, Method: Composition-based stats.
Identities = 52/101 (51%), Positives = 76/101 (75%)
Query: 2 HFVQILPLIRKHKVLHLNRTDARLANNGLPLDVQKLRCRVNFGSLKFTSDIEELGRRVIR 61
++ ++ L + HKV+H+ ++D+RLANNGLP+D+Q+LRCR + +L+F+ IE LG++++
Sbjct: 189 YYEEVKQLWKDHKVVHIPKSDSRLANNGLPIDIQRLRCRCLYQALRFSDPIENLGKKLLE 248
Query: 62 LLRQNGPFLVLHLRYEMDMLAFSGCTEGCTREEADELTRMR 102
LR G F+ LHLRYE DMLAF+GCT G + EADEL MR
Sbjct: 249 RLRSRGKFIALHLRYEKDMLAFTGCTYGLSESEADELRIMR 289
>Os09g0442900 Similar to Axi 1 (Auxin-independent growth promoter)-like protein
Length = 638
Score = 117 bits (293), Expect = 2e-27, Method: Composition-based stats.
Identities = 56/99 (56%), Positives = 77/99 (77%), Gaps = 1/99 (1%)
Query: 5 QILPLIRKHKVLHLNRTDARLANNGLPLDVQKLRCRVNFGSLKFTSDIEELGRRVIRLLR 64
+ILPL++KHKV++ TD+RLANNGLP +QKLRCRVN+ SLK++ IE+LG ++ +
Sbjct: 340 EILPLLKKHKVIYFTHTDSRLANNGLPSYIQKLRCRVNYRSLKYSQTIEDLGATLVSRMH 399
Query: 65 QNG-PFLVLHLRYEMDMLAFSGCTEGCTREEADELTRMR 102
Q+G P+L LHLR+E DMLAF+GC+ T EE +EL +MR
Sbjct: 400 QDGSPYLALHLRFEKDMLAFTGCSHSLTSEEEEELRKMR 438
>Os06g0219400 Protein of unknown function DUF246, plant family protein
Length = 492
Score = 109 bits (273), Expect = 4e-25, Method: Composition-based stats.
Identities = 49/98 (50%), Positives = 68/98 (69%)
Query: 5 QILPLIRKHKVLHLNRTDARLANNGLPLDVQKLRCRVNFGSLKFTSDIEELGRRVIRLLR 64
+I PL +V+ ++D+RLANN LP D+QKLRCR F +L+F IE LG ++ +R
Sbjct: 180 EIYPLWEHRQVIRAAKSDSRLANNYLPPDIQKLRCRAFFQALRFAPPIEALGNLLVERMR 239
Query: 65 QNGPFLVLHLRYEMDMLAFSGCTEGCTREEADELTRMR 102
GP++ LHLRYE DMLAFSGCT G ++ E++EL +R
Sbjct: 240 SFGPYIALHLRYEKDMLAFSGCTHGLSQTESEELAMIR 277
>Os05g0451900 Similar to Axi 1 (Auxin-independent growth promoter)-like protein
Length = 420
Score = 101 bits (252), Expect = 1e-22, Method: Composition-based stats.
Identities = 49/96 (51%), Positives = 68/96 (70%), Gaps = 3/96 (3%)
Query: 9 LIRKHKVLHLNRTDARLANNGLPLDVQKLRCRVNFGSLKFTSDIEELGRRVIRLLRQNG- 67
++RK+KV+ TD+R+ NNGL +Q+LRCR N+ +L++ +IEELGR ++ LR NG
Sbjct: 127 ILRKYKVVRFTHTDSRIVNNGLAPSLQRLRCRANYKALQYRKEIEELGRTLVDRLR-NGM 185
Query: 68 -PFLVLHLRYEMDMLAFSGCTEGCTREEADELTRMR 102
++ LHLRYE DML+F+GC T EADELT MR
Sbjct: 186 DHYIALHLRYEKDMLSFTGCNHNLTVHEADELTDMR 221
>Os01g0851100 Similar to Axi 1 (Auxin-independent growth promoter)-like protein
Length = 335
Score = 97.8 bits (242), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 47/95 (49%), Positives = 66/95 (69%), Gaps = 3/95 (3%)
Query: 10 IRKHKVLHLNRTDARLANNGLPLDVQKLRCRVNFGSLKFTSDIEELGRRVIRLLRQNGP- 68
++K KV+ TD+R+ NNGLP +Q+LRCR N+ +L+F +IEEL ++ LR NG
Sbjct: 43 LKKAKVVKFTHTDSRIVNNGLPPSIQRLRCRANYEALRFHKEIEELSTALVDRLR-NGSN 101
Query: 69 -FLVLHLRYEMDMLAFSGCTEGCTREEADELTRMR 102
++ LHLRYE DML+F+GC+ T +EADEL MR
Sbjct: 102 HYIALHLRYEKDMLSFTGCSHNLTHKEADELREMR 136
>Os04g0551300 Similar to Growth regulator like protein
Length = 311
Score = 87.0 bits (214), Expect = 3e-18, Method: Composition-based stats.
Identities = 44/99 (44%), Positives = 67/99 (67%), Gaps = 2/99 (2%)
Query: 5 QILPLIRKHKVLHLNRTDARLANNGLPLDVQKLRCRVNFGSLKFTSDIEELGRRVIRLLR 64
++LP++ + + L L + D RL N L ++QKLRCRVNF +L+FT+ I+ LG +++R LR
Sbjct: 204 EVLPILMRRRALQLTKFDYRLTNE-LDEELQKLRCRVNFHALRFTNSIQTLGEKLVRKLR 262
Query: 65 Q-NGPFLVLHLRYEMDMLAFSGCTEGCTREEADELTRMR 102
+ ++ +HLR+E DMLAFSGC G +E EL +R
Sbjct: 263 SMSSRYVAVHLRFEPDMLAFSGCYYGGGDKERRELGEIR 301
>Os12g0425600 Protein of unknown function DUF246, plant family protein
Length = 567
Score = 76.3 bits (186), Expect = 4e-15, Method: Composition-based stats.
Identities = 36/93 (38%), Positives = 57/93 (61%)
Query: 10 IRKHKVLHLNRTDARLANNGLPLDVQKLRCRVNFGSLKFTSDIEELGRRVIRLLRQNGPF 69
++K+ ++L RLA + ++Q+LRCRVN+ +L+F I ++ ++ LR G F
Sbjct: 240 MKKYGAIYLTPFSHRLAEDIDDPELQRLRCRVNYHALRFKPHIMKISNEIVNKLRSEGHF 299
Query: 70 LVLHLRYEMDMLAFSGCTEGCTREEADELTRMR 102
+ +HLR+EMDMLAF+GC + T EE L R
Sbjct: 300 MSIHLRFEMDMLAFAGCIDIFTPEEQKILIEYR 332
>Os02g0158800 Protein of unknown function DUF246, plant family protein
Length = 573
Score = 75.5 bits (184), Expect = 8e-15, Method: Composition-based stats.
Identities = 35/101 (34%), Positives = 59/101 (58%), Gaps = 4/101 (3%)
Query: 6 ILPLIRKHKVLHLNRTDARLANNGLPLDVQKLRCRVNFGSLKFTSDIEELGRRVIRLLRQ 65
+LP I++ K++ + RL + +P+++ +LRCRVN+ +LKF DIEE+ ++ +R
Sbjct: 279 VLPRIKEKKIMSIKPFVDRLGYDNVPMEINRLRCRVNYHALKFLPDIEEMADKLAARMRN 338
Query: 66 N----GPFLVLHLRYEMDMLAFSGCTEGCTREEADELTRMR 102
P++ LHLR+E M+ S C TREE + + R
Sbjct: 339 RTGSVNPYMALHLRFEKGMVGLSFCDFAGTREEKEMMAAYR 379
>Os11g0481200 Protein of unknown function DUF246, plant family protein
Length = 525
Score = 71.6 bits (174), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 35/93 (37%), Positives = 57/93 (61%)
Query: 10 IRKHKVLHLNRTDARLANNGLPLDVQKLRCRVNFGSLKFTSDIEELGRRVIRLLRQNGPF 69
++K+ ++L RLA + ++Q+LRCRVN+ +L+F I + ++ LR G F
Sbjct: 196 MKKYGAIYLTPFSHRLAEDIDDPELQRLRCRVNYHALRFKPHIMKTSSEIVNKLRTEGHF 255
Query: 70 LVLHLRYEMDMLAFSGCTEGCTREEADELTRMR 102
+ +HLR+EMDMLAF+GC + T +E L + R
Sbjct: 256 MSIHLRFEMDMLAFAGCIDIFTPQEQKILIKYR 288
>Os09g0412200 Protein of unknown function DUF246, plant family protein
Length = 512
Score = 65.9 bits (159), Expect = 6e-12, Method: Composition-based stats.
Identities = 38/116 (32%), Positives = 57/116 (49%), Gaps = 19/116 (16%)
Query: 6 ILPLIRKHKVLHLNRTDARLANNGLPLDVQKLRCRVNFGSLKFTSDIEELGRRVIRLLR- 64
+ P+++ + + + RLA + LP+D+Q LRC+VNF +L F I LG +++ LR
Sbjct: 210 VSPILQSYGIAAIAPFSHRLAFDDLPVDIQHLRCKVNFQALVFLPHIISLGETLVKRLRS 269
Query: 65 ------------------QNGPFLVLHLRYEMDMLAFSGCTEGCTREEADELTRMR 102
Q G + VLHLR++ DM A S C G R E L + R
Sbjct: 270 PVQGQSGELIQEVGEDTNQAGKYAVLHLRFDKDMAAHSACDFGGGRAERLALAKYR 325
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.329 0.144 0.429
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 3,134,559
Number of extensions: 108144
Number of successful extensions: 288
Number of sequences better than 1.0e-10: 15
Number of HSP's gapped: 287
Number of HSP's successfully gapped: 15
Length of query: 102
Length of database: 17,035,801
Length adjustment: 70
Effective length of query: 32
Effective length of database: 13,380,821
Effective search space: 428186272
Effective search space used: 428186272
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.8 bits)
S2: 149 (62.0 bits)