Os02g0726500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF246, plant family protein.
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Os02g0726500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein of unknown function DUF246, plant family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 152.94 | 0.581 | 6.84 | -3.61 | 1.12 | 2.12 | 1.51 | -3.21 | -0.684 | 5.4 | 26.86 | 1225 | -- | -- |
| 155.34 | 0.58 | 6.78 | -2.91 | 1.11 | 1.83 | 1.44 | -- | -0.618 | 5.39 | 26.27 | 1224 | -- | -- |
| 158.54 | 0.586 | 6.84 | -3.57 | 1.13 | 2.13 | -- | -3.04 | -0.688 | 5.49 | 26.83 | 1225 | -- | -- |
| 160.21 | 0.59 | 6.76 | -2.88 | 1.12 | 1.82 | -- | -- | -0.569 | 5.48 | 26.71 | 1221 | -- | -- |
| 222.92 | 0.695 | 6.87 | -3.5 | -- | 2.17 | -- | -2.36 | -0.75 | -- | 26.1 | 1265 | -- | -- |
| 283.25 | 0.789 | 6.75 | -2.32 | 1.27 | -- | 1.86 | -- | -0.524 | 4.56 | -- | -- | -- | -- |
| 292.53 | 0.801 | 6.76 | -2.33 | 1.29 | -- | -- | -- | -0.534 | 4.6 | -- | -- | -- | -- |
| 223.79 | 0.697 | 6.78 | -2.9 | -- | 1.92 | -- | -- | -0.597 | -- | 26.17 | 1264 | -- | -- |
| 360.57 | 0.884 | 6.63 | -- | 1.13 | 1.24 | -- | -- | -0.00081 | 5.17 | 30.27 | 1183 | -- | -- |
| 380.57 | 0.912 | 6.77 | -2.28 | -- | -- | -- | -- | -0.5 | -- | -- | -- | -- | -- |
| 436.13 | 0.977 | 6.7 | -- | 1.24 | -- | -- | -- | -0.274 | 4.65 | -- | -- | -- | -- |
| 426.44 | 0.962 | 6.64 | -- | -- | 1.34 | -- | -- | 0.0508 | -- | 30.2 | 1215 | -- | -- |
| 518.27 | 1.06 | 6.71 | -- | -- | -- | -- | -- | -0.246 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 163.00 | temperature | 25 | 1440 | > th | dose dependent | rect. | 16 | 1 |
| 2 | 163.08 | temperature | 25 | 1440 | > th | dose dependent | rect. | 15 | 4 |
| 3 | 163.20 | temperature | 25 | 1440 | > th | dose dependent | rect. | 13 | 6 |
| 6 | 163.35 | temperature | 25 | 1440 | > th | dose dependent | rect. | 13 | 10 |
| 9 | 163.40 | temperature | 25 | 1440 | > th | dose dependent | rect. | 11 | 12 |
| 12 | 163.57 | temperature | 25 | 1440 | > th | dose dependent | rect. | 11 | 8 |
| 16 | 163.59 | temperature | 25 | 1440 | > th | dose dependent | rect. | 13 | 20 |
| 30 | 163.80 | temperature | 25 | 1440 | > th | dose dependent | sin | 19 | NA |
| 60 | 164.35 | temperature | 25 | 1440 | > th | dose dependent | rect. | 6 | 17 |
| 89 | 164.58 | temperature | 25 | 1440 | > th | dose dependent | rect. | 6 | 14 |
| 162 | 165.06 | temperature | 25 | 1440 | > th | dose dependent | rect. | 21 | 22 |
| 188 | 165.21 | temperature | 25 | 1440 | > th | dose dependent | no | NA | NA |
| 234 | 165.73 | temperature | 30 | 1440 | < th | dose independent | rect. | 14 | 22 |
| 250 | 165.97 | temperature | 25 | 720 | > th | dose dependent | rect. | 17 | 16 |
| 262 | 166.22 | temperature | 30 | 1440 | > th | dose independent | rect. | 14 | 22 |
| 285 | 166.70 | temperature | 30 | 1440 | > th | dose independent | sin | 13 | NA |
| 286 | 166.71 | temperature | 30 | 1440 | < th | dose independent | rect. | 9 | 19 |
| 294 | 166.76 | temperature | 30 | 1440 | < th | dose independent | rect. | 9 | 16 |
| 300 | 166.81 | temperature | 30 | 1440 | < th | dose independent | rect. | 9 | 10 |
| 301 | 166.81 | temperature | 30 | 1440 | < th | dose independent | rect. | 9 | 13 |
| 307 | 166.84 | temperature | 30 | 1440 | < th | dose independent | rect. | 17 | 23 |
| 320 | 167.07 | temperature | 30 | 1440 | < th | dose independent | sin | 14 | NA |
| 326 | 167.10 | temperature | 30 | 1440 | > th | dose independent | rect. | 9 | 10 |
| 341 | 167.12 | temperature | 30 | 1440 | > th | dose independent | rect. | 15 | 4 |
| 421 | 167.25 | temperature | 30 | 1440 | < th | dose independent | rect. | 21 | 22 |
| 422 | 167.25 | temperature | 30 | 1440 | > th | dose independent | rect. | 17 | 23 |
| 441 | 167.26 | temperature | 30 | 1440 | < th | dose independent | rect. | 2 | 23 |
| 448 | 167.27 | temperature | 30 | 1440 | < th | dose independent | no | NA | NA |
| 450 | 167.27 | temperature | 30 | 1440 | < th | dose independent | rect. | 24 | 19 |
| 452 | 167.27 | temperature | 30 | 1440 | < th | dose independent | rect. | 24 | 23 |
| 576 | 167.32 | temperature | 30 | 1440 | < th | dose independent | rect. | 2 | 17 |
| 644 | 167.50 | temperature | 30 | 1440 | < th | dose independent | rect. | 11 | 23 |
| 675 | 167.63 | temperature | 30 | 1440 | < th | dose independent | rect. | 15 | 13 |
| 693 | 167.71 | temperature | 30 | 1440 | > th | dose independent | no | NA | NA |
| 790 | 167.73 | temperature | 30 | 1440 | < th | dose independent | rect. | 15 | 10 |
| 805 | 167.84 | temperature | 30 | 1440 | < th | dose independent | rect. | 15 | 8 |
| 837 | 167.86 | temperature | 30 | 1440 | < th | dose independent | rect. | 15 | 4 |