Os01g0851100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Axi 1 (Auxin-independent growth promoter)-like protein.
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Os01g0851100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to Axi 1 (Auxin-independent growth promoter)-like protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 109.54 | 0.492 | 10.5 | -1.06 | 0.832 | 2.21 | 1.24 | -2.95 | -0.419 | 5.34 | 12.32 | 922 | -- | -- |
| 108.33 | 0.485 | 10.5 | -0.87 | 0.793 | 2.14 | 0.539 | -- | -0.344 | 3.77 | 10.35 | 5465 | -- | -- |
| 113.19 | 0.496 | 10.5 | -1.04 | 0.801 | 2.14 | -- | -2.88 | -0.415 | 4.99 | 12.46 | 958 | -- | -- |
| 108.53 | 0.485 | 10.5 | -0.892 | 0.773 | 2.13 | -- | -- | -0.362 | 3.5 | 9.984 | 5513 | -- | -- |
| 138.26 | 0.548 | 10.5 | -1 | -- | 2.27 | -- | -2.26 | -0.423 | -- | 10.3 | 1164 | -- | -- |
| 183.43 | 0.635 | 10.4 | 0.117 | 0.874 | -- | 0.308 | -- | 0.0783 | 3.41 | -- | -- | -- | -- |
| 183.68 | 0.635 | 10.4 | 0.111 | 0.874 | -- | -- | -- | 0.0766 | 3.3 | -- | -- | -- | -- |
| 141.54 | 0.554 | 10.5 | -0.893 | -- | 2.24 | -- | -- | -0.354 | -- | 10.29 | 5470 | -- | -- |
| 124.19 | 0.519 | 10.4 | -- | 0.792 | 1.64 | -- | -- | -0.185 | 3.46 | 12.2 | 5441 | -- | -- |
| 226.83 | 0.704 | 10.4 | 0.148 | -- | -- | -- | -- | 0.0996 | -- | -- | -- | -- | -- |
| 184.01 | 0.635 | 10.4 | -- | 0.876 | -- | -- | -- | 0.0643 | 3.3 | -- | -- | -- | -- |
| 152.18 | 0.575 | 10.4 | -- | -- | 1.38 | -- | -- | -0.157 | -- | 22.01 | 2680 | -- | -- |
| 227.41 | 0.704 | 10.4 | -- | -- | -- | -- | -- | 0.0832 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 108.20 | temperature | 20 | 1440 | > th | dose dependent | rect. | 11 | 4 |
| 4 | 108.32 | temperature | 20 | 1440 | > th | dose dependent | rect. | 11 | 8 |
| 31 | 109.12 | temperature | 30 | 4320 | < th | dose dependent | rect. | 7 | 1 |
| 37 | 109.16 | temperature | 15 | 4320 | > th | dose dependent | rect. | 7 | 1 |
| 99 | 109.64 | temperature | 10 | 4320 | > th | dose dependent | rect. | 5 | 11 |
| 106 | 109.69 | temperature | 30 | 4320 | < th | dose dependent | rect. | 6 | 3 |
| 108 | 109.70 | temperature | 10 | 4320 | > th | dose dependent | rect. | 6 | 3 |
| 137 | 109.84 | temperature | 20 | 1440 | > th | dose dependent | sin | 22 | NA |
| 458 | 111.13 | temperature | 10 | 720 | > th | dose dependent | rect. | 2 | 23 |
| 467 | 111.16 | temperature | 10 | 4320 | > th | dose dependent | rect. | 15 | 1 |
| 584 | 111.53 | temperature | 10 | 720 | > th | dose dependent | rect. | 12 | 23 |
| 595 | 111.57 | temperature | 25 | 4320 | < th | dose independent | rect. | 6 | 9 |
| 619 | 111.62 | humidity | 70 | 14400 | < th | dose dependent | rect. | 18 | 2 |
| 675 | 111.76 | humidity | 70 | 14400 | < th | dose dependent | rect. | 18 | 13 |
| 696 | 111.79 | temperature | 10 | 720 | > th | dose dependent | rect. | 10 | 23 |
| 711 | 111.82 | temperature | 15 | 720 | > th | dose dependent | rect. | 23 | 23 |
| 719 | 111.84 | temperature | 30 | 4320 | < th | dose dependent | sin | 2 | NA |
| 865 | 112.14 | temperature | 25 | 4320 | > th | dose independent | rect. | 6 | 9 |