BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os01g0165000 Os01g0165000|AK121956
(274 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os01g0165000 DRE binding protein 2 539 e-154
Os08g0565200 Pathogenesis-related transcriptional factor an... 107 1e-23
Os05g0346200 Similar to Ethylene response factor 1 102 4e-22
Os05g0351200 Pathogenesis-related transcriptional factor an... 79 4e-15
Os01g0200600 Similar to Avr9/Cf-9 rapidly elicited protein ... 70 1e-12
AK100167 70 2e-12
Os06g0194000 Similar to Ethylene-responsive transcription f... 70 2e-12
Os02g0231000 68 8e-12
Os04g0549700 Similar to Dehydration responsive element bind... 67 1e-11
Os08g0408500 Pathogenesis-related transcriptional factor an... 67 1e-11
Os05g0473300 Similar to Ethylene response factor 1 67 1e-11
Os07g0617000 Similar to Ethylene response factor 2 67 1e-11
Os09g0369000 Similar to DRE binding factor 1 67 1e-11
Os10g0560700 Similar to Transcriptional factor TINY 67 2e-11
Os04g0550200 Pathogenesis-related transcriptional factor an... 67 2e-11
Os06g0553700 66 3e-11
Os02g0656600 Similar to Dehydration responsive element bind... 65 5e-11
Os02g0657000 AP2 domain-containing protein Rap211 65 5e-11
Os01g0657400 Similar to Ethylene-responsive transcription f... 65 6e-11
>Os01g0165000 DRE binding protein 2
Length = 274
Score = 539 bits (1388), Expect = e-154, Method: Compositional matrix adjust.
Identities = 260/274 (94%), Positives = 260/274 (94%)
Query: 1 MERGEGRRGDCSVQVRKKRTRRKSDGPDSIAETIKWWKEQNQKLQEENSSRKAPAKGSKK 60
MERGEGRRGDCSVQVRKKRTRRKSDGPDSIAETIKWWKEQNQKLQEENSSRKAPAKGSKK
Sbjct: 1 MERGEGRRGDCSVQVRKKRTRRKSDGPDSIAETIKWWKEQNQKLQEENSSRKAPAKGSKK 60
Query: 61 GCMAGKGGPENSNCAYRGVRQRTWGKWVAEIREPNRGRRLWLGSFPTXXXXXXXXXXXXX 120
GCMAGKGGPENSNCAYRGVRQRTWGKWVAEIREPNRGRRLWLGSFPT
Sbjct: 61 GCMAGKGGPENSNCAYRGVRQRTWGKWVAEIREPNRGRRLWLGSFPTALEAAHAYDEAAR 120
Query: 121 XMYGPTARVNFADNSTDANSGCTSAPSLMMSNGPATIPSDEKDELESPPFIVANGPAVLY 180
MYGPTARVNFADNSTDANSGCTSAPSLMMSNGPATIPSDEKDELESPPFIVANGPAVLY
Sbjct: 121 AMYGPTARVNFADNSTDANSGCTSAPSLMMSNGPATIPSDEKDELESPPFIVANGPAVLY 180
Query: 181 QPDKKDVLERVVPEVQDVKTEGSNGLKRVCQERKNMEVCESEGIVLHKEVNISYDYFNVH 240
QPDKKDVLERVVPEVQDVKTEGSNGLKRVCQERKNMEVCESEGIVLHKEVNISYDYFNVH
Sbjct: 181 QPDKKDVLERVVPEVQDVKTEGSNGLKRVCQERKNMEVCESEGIVLHKEVNISYDYFNVH 240
Query: 241 EVVEMIIVELSADQKTEVHEEYQEGDDGFSLFSY 274
EVVEMIIVELSADQKTEVHEEYQEGDDGFSLFSY
Sbjct: 241 EVVEMIIVELSADQKTEVHEEYQEGDDGFSLFSY 274
>Os08g0565200 Pathogenesis-related transcriptional factor and ERF domain
containing protein
Length = 230
Score = 107 bits (266), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 48/87 (55%), Positives = 56/87 (64%)
Query: 44 LQEENSSRKAPAKGSKKGCMAGKGGPENSNCAYRGVRQRTWGKWVAEIREPNRGRRLWLG 103
+ S + P + S+KGCM GKGGPEN C +RGVRQRTWGKWVAEIREPNRG RLWLG
Sbjct: 23 ISSSKSRKCCPLRRSRKGCMKGKGGPENQRCPFRGVRQRTWGKWVAEIREPNRGARLWLG 82
Query: 104 SFPTXXXXXXXXXXXXXXMYGPTARVN 130
+F T +YG AR+N
Sbjct: 83 TFNTALDAARAYDSAARALYGDCARLN 109
>Os05g0346200 Similar to Ethylene response factor 1
Length = 298
Score = 102 bits (253), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 46/78 (58%), Positives = 51/78 (65%)
Query: 63 MAGKGGPENSNCAYRGVRQRTWGKWVAEIREPNRGRRLWLGSFPTXXXXXXXXXXXXXXM 122
M GKGGPEN+ C +RGVRQRTWGKWVAEIREPN+ RLWLG+FPT M
Sbjct: 1 MKGKGGPENTRCDFRGVRQRTWGKWVAEIREPNQQSRLWLGTFPTAEAAACAYDEAARAM 60
Query: 123 YGPTARVNFADNSTDANS 140
YGP AR NF + A S
Sbjct: 61 YGPMARTNFGQHHAPAAS 78
>Os05g0351200 Pathogenesis-related transcriptional factor and ERF domain
containing protein
Length = 269
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 37/67 (55%), Positives = 42/67 (62%)
Query: 64 AGKGGPENSNCAYRGVRQRTWGKWVAEIREPNRGRRLWLGSFPTXXXXXXXXXXXXXXMY 123
AGKGGPEN YRGVRQR+WGKWVAEIREP + R WLG+F T +Y
Sbjct: 38 AGKGGPENGKFRYRGVRQRSWGKWVAEIREPRKRSRKWLGTFATAEDAARAYDRAALLLY 97
Query: 124 GPTARVN 130
GP A +N
Sbjct: 98 GPRAHLN 104
>Os01g0200600 Similar to Avr9/Cf-9 rapidly elicited protein 111A
Length = 228
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 36/96 (37%), Positives = 48/96 (50%)
Query: 51 RKAPAKGSKKGCMAGKGGPENSNCAYRGVRQRTWGKWVAEIREPNRGRRLWLGSFPTXXX 110
+K G +K G GG + + AYRGVR R WGKWV+EIREP + R+WLG+FP
Sbjct: 21 KKQQVAGKRKREDVGGGGEQAAAVAYRGVRMRAWGKWVSEIREPRKKSRIWLGTFPCPEM 80
Query: 111 XXXXXXXXXXXMYGPTARVNFADNSTDANSGCTSAP 146
+ G A +NF D + + AP
Sbjct: 81 AARAHDVAALSIKGARAVLNFPDLAPALPRPASLAP 116
>AK100167
Length = 571
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/139 (33%), Positives = 65/139 (46%), Gaps = 20/139 (14%)
Query: 53 APAKGSKKG-----CMAGKGGPENSNC------AYRGVRQRTWGKWVAEIREPNRGRRLW 101
AP G KG +AG GP + +RG+RQR WGKW AEIR+P +G R+W
Sbjct: 81 APRSGFAKGGLKNTTVAGADGPAARSAKRKRKNQFRGIRQRPWGKWAAEIRDPRKGVRVW 140
Query: 102 LGSFPTXXXXXXXXXXXXXXMYGPTARVNFADNSTDANSGCTSAPSLMMSNGPATIPSDE 161
LG+F + + G A+VNF D + A+ + PS M N PA
Sbjct: 141 LGTFNSPEEAARAYDAEARRIRGKKAKVNFPDGAPVASQRSHAEPSSM--NMPAF----- 193
Query: 162 KDELESPPFIVANGPAVLY 180
+E P +++ G +Y
Sbjct: 194 --SIEEKPAVMSAGNKTMY 210
>Os06g0194000 Similar to Ethylene-responsive transcription factor 3
(Ethylene-responsive element binding factor 3 homolog)
(EREBP-5) (NtERF5)
Length = 362
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 62/130 (47%), Gaps = 15/130 (11%)
Query: 57 GSKKGCMAGKGGPENSNC------AYRGVRQRTWGKWVAEIREPNRGRRLWLGSFPTXXX 110
G K +AG GP + +RG+RQR WGKW AEIR+P +G R+WLG+F +
Sbjct: 90 GLKNTTVAGADGPAARSAKRKRKNQFRGIRQRPWGKWAAEIRDPRKGVRVWLGTFNSPEE 149
Query: 111 XXXXXXXXXXXMYGPTARVNFADNSTDANSGCTSAPSLMMSNGPATIPSDEKDELESPPF 170
+ G A+VNF D + A+ + PS M N PA +E P
Sbjct: 150 AARAYDAEARRIRGKKAKVNFPDGAPVASQRSHAEPSSM--NMPAF-------SIEEKPA 200
Query: 171 IVANGPAVLY 180
+++ G +Y
Sbjct: 201 VMSAGNKTMY 210
>Os02g0231000
Length = 247
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 41/72 (56%)
Query: 75 AYRGVRQRTWGKWVAEIREPNRGRRLWLGSFPTXXXXXXXXXXXXXXMYGPTARVNFADN 134
+YRGVR R WGKWV+EIREP + R+WLG+FPT + GP A +NF D
Sbjct: 45 SYRGVRMRAWGKWVSEIREPRKKSRIWLGTFPTPEMAARAHDAAALVVKGPAAVLNFPDM 104
Query: 135 STDANSGCTSAP 146
+ +++P
Sbjct: 105 AASLPRPASASP 116
>Os04g0549700 Similar to Dehydration responsive element binding protein 1F
(DREB1F protein)
Length = 284
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 39/61 (63%)
Query: 75 AYRGVRQRTWGKWVAEIREPNRGRRLWLGSFPTXXXXXXXXXXXXXXMYGPTARVNFADN 134
+YRGVR+R+WGKWV+EIREP + R+WLG+FPT + G A +NF D+
Sbjct: 117 SYRGVRRRSWGKWVSEIREPRKKSRIWLGTFPTAEMAARAHDVAALAIKGRNAHLNFPDS 176
Query: 135 S 135
+
Sbjct: 177 A 177
>Os08g0408500 Pathogenesis-related transcriptional factor and ERF domain
containing protein
Length = 280
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 31/61 (50%), Positives = 35/61 (57%)
Query: 76 YRGVRQRTWGKWVAEIREPNRGRRLWLGSFPTXXXXXXXXXXXXXXMYGPTARVNFADNS 135
YRGVRQR WGKWVAEIR P RLWLG+F T + G AR+NF DN+
Sbjct: 104 YRGVRQRHWGKWVAEIRLPRNRTRLWLGTFDTAEEAALTYDQAAYRLRGDAARLNFPDNA 163
Query: 136 T 136
Sbjct: 164 A 164
>Os05g0473300 Similar to Ethylene response factor 1
Length = 241
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 32/66 (48%), Positives = 40/66 (60%)
Query: 75 AYRGVRQRTWGKWVAEIREPNRGRRLWLGSFPTXXXXXXXXXXXXXXMYGPTARVNFADN 134
+YRGVRQR WGKWV+EIREPNRG+R WLG+F + + GP A +NF
Sbjct: 66 SYRGVRQRRWGKWVSEIREPNRGKRHWLGTFGSAVDAALAYDKAAASILGPRAVLNFPAF 125
Query: 135 STDANS 140
S A +
Sbjct: 126 SPPAAA 131
>Os07g0617000 Similar to Ethylene response factor 2
Length = 342
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 31/69 (44%), Positives = 38/69 (55%)
Query: 65 GKGGPENSNCAYRGVRQRTWGKWVAEIREPNRGRRLWLGSFPTXXXXXXXXXXXXXXMYG 124
G GG YRG+RQR WGKW AEIR+P +G R+WLG+F T + G
Sbjct: 101 GLGGSRKRKTRYRGIRQRPWGKWAAEIRDPRKGVRVWLGTFGTAEEAAMAYDVEARRIRG 160
Query: 125 PTARVNFAD 133
A+VNF D
Sbjct: 161 KKAKVNFPD 169
>Os09g0369000 Similar to DRE binding factor 1
Length = 291
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 31/61 (50%), Positives = 35/61 (57%)
Query: 76 YRGVRQRTWGKWVAEIREPNRGRRLWLGSFPTXXXXXXXXXXXXXXMYGPTARVNFADNS 135
YRGVRQR WGKWVAEIR P RLWLG+F T + G AR+NF DN+
Sbjct: 111 YRGVRQRHWGKWVAEIRLPRNRTRLWLGTFDTAEEAALAYDQAAYRLRGDAARLNFPDNA 170
Query: 136 T 136
Sbjct: 171 A 171
>Os10g0560700 Similar to Transcriptional factor TINY
Length = 289
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 39/71 (54%)
Query: 76 YRGVRQRTWGKWVAEIREPNRGRRLWLGSFPTXXXXXXXXXXXXXXMYGPTARVNFADNS 135
YRGVR R WGKWV+EIREP + R+WLG+FPT + G A +NF D +
Sbjct: 96 YRGVRMRAWGKWVSEIREPRKKSRIWLGTFPTADMAARAHDVAALAIKGRAAHLNFPDLA 155
Query: 136 TDANSGCTSAP 146
+++P
Sbjct: 156 GVLPRAASASP 166
>Os04g0550200 Pathogenesis-related transcriptional factor and ERF domain
containing protein
Length = 217
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 35/86 (40%), Positives = 46/86 (53%), Gaps = 2/86 (2%)
Query: 63 MAGKGGPENS--NCAYRGVRQRTWGKWVAEIREPNRGRRLWLGSFPTXXXXXXXXXXXXX 120
+A K P N + YRGVR R+WGKWV+EIREP + R+WLG+F T
Sbjct: 32 VAPKKRPRNDGRHPTYRGVRMRSWGKWVSEIREPRKKSRIWLGTFATAEMAARAHDVAAL 91
Query: 121 XMYGPTARVNFADNSTDANSGCTSAP 146
+ G TA +NF D + T+AP
Sbjct: 92 AIKGRTAHLNFPDLAHLLPRPATAAP 117
>Os06g0553700
Length = 263
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 39/71 (54%)
Query: 76 YRGVRQRTWGKWVAEIREPNRGRRLWLGSFPTXXXXXXXXXXXXXXMYGPTARVNFADNS 135
YRGVR R WGKWV+EIREP + R+WLG+FPT + GP A +NF +
Sbjct: 51 YRGVRMRAWGKWVSEIREPRKKSRIWLGTFPTPEMAARAHDAAALVVKGPAAVLNFPGAA 110
Query: 136 TDANSGCTSAP 146
++AP
Sbjct: 111 ASLPRPASAAP 121
>Os02g0656600 Similar to Dehydration responsive element binding protein 2B
(DREB2B protein)
Length = 287
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 45/82 (54%)
Query: 66 KGGPENSNCAYRGVRQRTWGKWVAEIREPNRGRRLWLGSFPTXXXXXXXXXXXXXXMYGP 125
K G + +YRGVR+R+WGKWV+EIREP + R+WLG+FPT + G
Sbjct: 89 KRGDAGRHPSYRGVRRRSWGKWVSEIREPRKKSRIWLGTFPTAEMAARAHDVAALAIKGR 148
Query: 126 TARVNFADNSTDANSGCTSAPS 147
A +NF + +++PS
Sbjct: 149 AAHLNFPSLAHTLPRPASTSPS 170
>Os02g0657000 AP2 domain-containing protein Rap211
Length = 225
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 40/71 (56%)
Query: 76 YRGVRQRTWGKWVAEIREPNRGRRLWLGSFPTXXXXXXXXXXXXXXMYGPTARVNFADNS 135
YRGVR R+WGKWV+EIREP + R+WLG+F T + G A +NF D +
Sbjct: 50 YRGVRMRSWGKWVSEIREPRKKSRIWLGTFATAEMAARAHDVAALAIKGRAAHLNFPDLA 109
Query: 136 TDANSGCTSAP 146
+ T+AP
Sbjct: 110 HELPRPATAAP 120
>Os01g0657400 Similar to Ethylene-responsive transcription factor 5
(Ethylene-responsive element binding factor 5) (EREBP-5)
(AtERF5)
Length = 292
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 43/74 (58%)
Query: 67 GGPENSNCAYRGVRQRTWGKWVAEIREPNRGRRLWLGSFPTXXXXXXXXXXXXXXMYGPT 126
GGP + +RGVR+R WGK+ AEIR+P RG R+WLG+F T + GP+
Sbjct: 87 GGPGAPSTKFRGVRRRPWGKFAAEIRDPWRGVRVWLGTFDTAEEAARVYDNAAIQLRGPS 146
Query: 127 ARVNFADNSTDANS 140
A NF+ ++ A +
Sbjct: 147 ATTNFSASTNSAGA 160
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.312 0.130 0.390
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 10,051,665
Number of extensions: 431640
Number of successful extensions: 1316
Number of sequences better than 1.0e-10: 29
Number of HSP's gapped: 1331
Number of HSP's successfully gapped: 29
Length of query: 274
Length of database: 17,035,801
Length adjustment: 99
Effective length of query: 175
Effective length of database: 11,866,615
Effective search space: 2076657625
Effective search space used: 2076657625
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 155 (64.3 bits)