Os08g0565200
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Pathogenesis-related transcriptional factor and ERF domain containing protein.
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Os08g0565200 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Pathogenesis-related transcriptional factor and ERF domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = precipitation,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 119.66 | 0.514 | 2.95 | -0.136 | 0.146 | -0.621 | -0.0416 | 1.48 | 0.0406 | 5.32 | 0.2357 | 4090 | -- | -- |
| 121.23 | 0.513 | 2.93 | -0.199 | 0.14 | -0.544 | -0.053 | -- | 0.0358 | 5.29 | 0.318 | 4525 | -- | -- |
| 117.97 | 0.51 | 2.96 | -0.162 | 0.11 | -5.96 | -- | 19.8 | -0.00045 | 5.21 | 0.2655 | 4090 | -- | -- |
| 121.23 | 0.513 | 2.93 | -0.2 | 0.14 | -0.545 | -- | -- | 0.0391 | 5.4 | 0.3387 | 4525 | -- | -- |
| 118.59 | 0.51 | 2.97 | -0.16 | -- | -6.13 | -- | 20.2 | 0.00263 | -- | 0.2655 | 4090 | -- | -- |
| 124.8 | 0.524 | 2.94 | -0.11 | 0.142 | -- | -0.0191 | -- | -0.0101 | 5.53 | -- | -- | -- | -- |
| 124.8 | 0.523 | 2.94 | -0.111 | 0.142 | -- | -- | -- | -0.00999 | 5.48 | -- | -- | -- | -- |
| 122.26 | 0.515 | 2.93 | -0.196 | -- | -0.547 | -- | -- | 0.0428 | -- | 0.325 | 4527 | -- | -- |
| 122.23 | 0.515 | 2.93 | -- | 0.137 | -0.478 | -- | -- | 0.055 | 5.41 | 0.3379 | 4525 | -- | -- |
| 125.85 | 0.524 | 2.95 | -0.106 | -- | -- | -- | -- | -0.00652 | -- | -- | -- | -- | -- |
| 125.12 | 0.523 | 2.94 | -- | 0.14 | -- | -- | -- | 0.00232 | 5.51 | -- | -- | -- | -- |
| 123.21 | 0.517 | 2.93 | -- | -- | -0.48 | -- | -- | 0.0573 | -- | 0.3128 | 4526 | -- | -- |
| 126.15 | 0.524 | 2.94 | -- | -- | -- | -- | -- | 0.00522 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 114.89 | atmosphere | 1000.0 | 10 | < th | dose independent | rect. | 5 | 1 |
| 8 | 114.89 | atmosphere | 1000.0 | 10 | < th | dose dependent | rect. | 5 | 1 |
| 28 | 116.03 | wind | 5.0 | 90 | > th | dose dependent | rect. | 4 | 5 |
| 30 | 116.30 | wind | 7.0 | 90 | > th | dose independent | rect. | 4 | 5 |
| 46 | 117.35 | wind | 5.0 | 270 | > th | dose independent | rect. | 2 | 5 |
| 47 | 117.47 | wind | 3.0 | 90 | > th | dose dependent | rect. | 5 | 1 |
| 49 | 117.51 | wind | 5.0 | 270 | > th | dose dependent | rect. | 2 | 5 |
| 51 | 117.58 | wind | 3.0 | 10 | > th | dose dependent | rect. | 6 | 1 |
| 53 | 117.61 | wind | 5.0 | 10 | > th | dose independent | rect. | 10 | 1 |
| 57 | 117.61 | wind | 5.0 | 10 | > th | dose dependent | rect. | 10 | 1 |
| 61 | 117.62 | wind | 3.0 | 10 | > th | dose independent | rect. | 6 | 1 |
| 62 | 117.64 | precipitation | 0.1 | 90 | > th | dose independent | rect. | 5 | 1 |
| 63 | 117.64 | precipitation | 0.1 | 90 | > th | dose dependent | rect. | 5 | 1 |
| 64 | 117.65 | precipitation | 0.1 | 30 | > th | dose independent | rect. | 5 | 9 |
| 72 | 117.65 | precipitation | 0.1 | 30 | > th | dose dependent | rect. | 5 | 9 |
| 76 | 117.66 | wind | 3.0 | 90 | > th | dose independent | rect. | 5 | 1 |
| 85 | 117.67 | precipitation | 0.1 | 270 | > th | dose independent | rect. | 5 | 4 |
| 88 | 117.67 | precipitation | 0.1 | 270 | > th | dose dependent | rect. | 5 | 4 |
| 90 | 117.68 | precipitation | 0.1 | 10 | > th | dose independent | rect. | 5 | 3 |
| 113 | 117.68 | precipitation | 0.1 | 10 | > th | dose dependent | rect. | 5 | 3 |
| 133 | 117.69 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 3 | 7 |
| 145 | 117.69 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 3 | 7 |
| 158 | 117.71 | wind | 7.0 | 90 | > th | dose dependent | rect. | 8 | 1 |
| 160 | 117.71 | wind | 7.0 | 270 | > th | dose dependent | rect. | 2 | 7 |
| 197 | 117.77 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 3 | 9 |
| 198 | 117.78 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 3 | 9 |
| 202 | 117.80 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 3 | 9 |
| 203 | 117.80 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 3 | 9 |
| 206 | 117.82 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 3 | 7 |
| 208 | 117.83 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 3 | 7 |
| 261 | 118.00 | humidity | 90.0 | 90 | > th | dose independent | rect. | 8 | 1 |
| 271 | 118.07 | wind | 5.0 | 270 | > th | dose dependent | rect. | 2 | 1 |
| 272 | 118.08 | wind | 5.0 | 270 | > th | dose independent | rect. | 2 | 1 |
| 302 | 118.24 | atmosphere | 995.0 | 14400 | > th | dose independent | rect. | 4 | 2 |
| 303 | 118.25 | wind | 5.0 | 720 | < th | dose independent | rect. | 1 | 4 |
| 343 | 118.38 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 12 | 1 |
| 346 | 118.38 | precipitation | 0.1 | 10 | > th | dose independent | rect. | 5 | 19 |
| 348 | 118.38 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 12 | 1 |
| 351 | 118.38 | precipitation | 0.1 | 10 | > th | dose dependent | rect. | 5 | 19 |
| 363 | 118.42 | humidity | 90.0 | 90 | > th | dose dependent | rect. | 8 | 1 |
| 385 | 118.52 | atmosphere | 995.0 | 14400 | > th | dose independent | rect. | 19 | 4 |
| 388 | 118.53 | wind | 3.0 | 270 | > th | dose independent | rect. | 1 | 7 |
| 391 | 118.54 | atmosphere | 995.0 | 14400 | > th | dose independent | rect. | 22 | 2 |
| 424 | 118.65 | wind | 9.0 | 90 | > th | dose dependent | rect. | 21 | 13 |
| 428 | 118.66 | wind | 3.0 | 270 | > th | dose independent | rect. | 23 | 9 |
| 429 | 118.66 | atmosphere | 995.0 | 14400 | > th | dose independent | rect. | 19 | 11 |
| 433 | 118.68 | atmosphere | 995.0 | 14400 | > th | dose independent | rect. | 22 | 8 |
| 436 | 118.69 | wind | 3.0 | 1440 | < th | dose independent | rect. | 5 | 1 |
| 449 | 118.75 | humidity | 90.0 | 10 | > th | dose independent | rect. | 6 | 1 |
| 460 | 118.78 | atmosphere | 995.0 | 14400 | > th | dose independent | rect. | 3 | 6 |
| 469 | 118.80 | wind | 3.0 | 1440 | > th | dose independent | rect. | 5 | 1 |
| 470 | 118.80 | atmosphere | 995.0 | 14400 | < th | dose independent | rect. | 1 | 1 |
| 475 | 118.80 | atmosphere | 995.0 | 14400 | < th | dose independent | rect. | 21 | 1 |
| 624 | 118.80 | atmosphere | 995.0 | 14400 | < th | dose dependent | rect. | 1 | 1 |
| 629 | 118.80 | atmosphere | 995.0 | 14400 | < th | dose dependent | rect. | 21 | 1 |
| 779 | 118.81 | atmosphere | 995.0 | 14400 | > th | dose independent | rect. | 19 | 14 |
| 797 | 118.85 | atmosphere | 995.0 | 14400 | > th | dose independent | rect. | 22 | 11 |
| 803 | 118.86 | atmosphere | 995.0 | 14400 | > th | dose independent | rect. | 19 | 7 |
| 827 | 118.89 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 7 | 3 |
| 828 | 118.89 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 7 | 3 |
| 854 | 118.93 | wind | 3.0 | 720 | < th | dose independent | rect. | 3 | 3 |
| 859 | 118.93 | atmosphere | 995.0 | 14400 | < th | dose dependent | sin | 8 | NA |
| 868 | 118.95 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 9 | 1 |
| 876 | 118.95 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 9 | 1 |
| 893 | 118.98 | radiation | 1.0 | 10 | < th | dose independent | rect. | 6 | 1 |
| 909 | 119.00 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 3 | 14 |
| 912 | 119.00 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 3 | 14 |
| 923 | 119.02 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 8 | 6 |
| 927 | 119.02 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 8 | 6 |
| 942 | 119.06 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 8 | 6 |
| 958 | 119.07 | wind | 3.0 | 720 | < th | dose independent | rect. | 2 | 6 |
| 982 | 119.11 | precipitation | 0.1 | 4320 | > th | dose independent | sin | 4 | NA |
| 985 | 119.11 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 21 | 16 |
| 988 | 119.12 | precipitation | 0.1 | 4320 | < th | dose independent | sin | 4 | NA |
| 994 | 119.12 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 21 | 16 |
| 995 | 119.12 | precipitation | 0.1 | 4320 | < th | dose dependent | sin | 4 | NA |
| 997 | 119.12 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 21 | 16 |