BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os12g0563600 Os12g0563600|AK069514
(203 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os12g0563600 Protein of unknown function DUF538 family protein 276 1e-74
Os11g0683600 Protein of unknown function DUF538 family protein 163 8e-41
Os11g0594700 Protein of unknown function DUF538 family protein 108 3e-24
Os11g0594800 Protein of unknown function DUF538 family protein 104 6e-23
Os01g0210600 Protein of unknown function DUF538 family protein 96 3e-20
Os11g0595000 Protein of unknown function DUF538 family protein 93 1e-19
Os07g0120600 Protein of unknown function DUF538 family protein 88 4e-18
Os05g0573600 87 7e-18
Os01g0652700 Protein of unknown function DUF538 family protein 87 1e-17
Os07g0119800 Protein of unknown function DUF538 family protein 84 9e-17
Os07g0120100 Protein of unknown function DUF538 family protein 82 3e-16
Os07g0118250 Protein of unknown function DUF538 family protein 82 3e-16
Os07g0120000 Protein of unknown function DUF538 family protein 82 3e-16
Os07g0120500 Protein of unknown function DUF538 family protein 80 7e-16
Os07g0118200 Protein of unknown function DUF538 family protein 77 7e-15
Os10g0518000 Protein of unknown function DUF538 family protein 70 1e-12
Os06g0538900 Protein of unknown function DUF538 family protein 68 5e-12
>Os12g0563600 Protein of unknown function DUF538 family protein
Length = 203
Score = 276 bits (705), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 145/203 (71%), Positives = 145/203 (71%)
Query: 1 MTLTIPDDVRAKAEVYVGDEAGQEKTRLLLEETGLPSGLLPLRDIIECGYVEETGFVWLK 60
MTLTIPDDVRAKAEVYVGDEAGQEKTRLLLEETGLPSGLLPLRDIIECGYVEETGFVWLK
Sbjct: 1 MTLTIPDDVRAKAEVYVGDEAGQEKTRLLLEETGLPSGLLPLRDIIECGYVEETGFVWLK 60
Query: 61 QRRKVDHFFAKAGRHXXXXXXXXXXXXKGRLRKITGVKAKELLIWVTLHEIAVDDPPTGK 120
QRRKVDHFFAKAGRH KGRLRKITGVKAKELLIWVTLHEIAVDDPPTGK
Sbjct: 61 QRRKVDHFFAKAGRHVSYAAEVSAVAEKGRLRKITGVKAKELLIWVTLHEIAVDDPPTGK 120
Query: 121 LTCKAIGGLSRSFXXXXXXXXXXXXXXXXXXXGDTTXXXXXXXXXXXXXXXXXXXXXXXX 180
LTCKAIGGLSRSF GDTT
Sbjct: 121 LTCKAIGGLSRSFPVDAFEAPPPPPKNPSPAAGDTTKVDEEKKKEEEVAGDAAAAAIDEI 180
Query: 181 XXXMKEMNSKEVQVQAEGVAAKN 203
MKEMNSKEVQVQAEGVAAKN
Sbjct: 181 EGKMKEMNSKEVQVQAEGVAAKN 203
>Os11g0683600 Protein of unknown function DUF538 family protein
Length = 172
Score = 163 bits (413), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 72/133 (54%), Positives = 99/133 (74%)
Query: 1 MTLTIPDDVRAKAEVYVGDEAGQEKTRLLLEETGLPSGLLPLRDIIECGYVEETGFVWLK 60
M L I D+++AKAEVY DE Q+ TRLLL+E GLP+GLLPL+DI+ECGYVEETGFVWLK
Sbjct: 1 MALVIADEIKAKAEVYYDDEICQQCTRLLLKEAGLPNGLLPLKDIMECGYVEETGFVWLK 60
Query: 61 QRRKVDHFFAKAGRHXXXXXXXXXXXXKGRLRKITGVKAKELLIWVTLHEIAVDDPPTGK 120
Q++++DH F GR KGR++K+ G+K +EL++WV + EIA+D+ TGK
Sbjct: 61 QKKRIDHVFQSLGRLVSYGTEITAFAEKGRIKKVKGIKTRELMVWVPVEEIALDEQKTGK 120
Query: 121 LTCKAIGGLSRSF 133
L CK+I G++++F
Sbjct: 121 LICKSIAGITKTF 133
>Os11g0594700 Protein of unknown function DUF538 family protein
Length = 142
Score = 108 bits (269), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 56/133 (42%), Positives = 77/133 (57%)
Query: 1 MTLTIPDDVRAKAEVYVGDEAGQEKTRLLLEETGLPSGLLPLRDIIECGYVEETGFVWLK 60
M I + R AE+ GDEA ++K+ LL E GLP GL PL D+ E GY GF+W+
Sbjct: 1 MAAKIIESHRVGAEIANGDEAAKKKSIELLSELGLPEGLFPLDDMEEFGYNRANGFMWIV 60
Query: 61 QRRKVDHFFAKAGRHXXXXXXXXXXXXKGRLRKITGVKAKELLIWVTLHEIAVDDPPTGK 120
R+K +H F K + KG+L+KI GVK KEL++W+++ E+ VD+ GK
Sbjct: 61 HRKKKEHTFKKIKQTVSYATEVTAFVEKGKLKKIAGVKTKELMLWLSVVEVYVDESSAGK 120
Query: 121 LTCKAIGGLSRSF 133
+T K GLS SF
Sbjct: 121 ITFKTGTGLSDSF 133
>Os11g0594800 Protein of unknown function DUF538 family protein
Length = 142
Score = 104 bits (259), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 55/133 (41%), Positives = 77/133 (57%)
Query: 1 MTLTIPDDVRAKAEVYVGDEAGQEKTRLLLEETGLPSGLLPLRDIIECGYVEETGFVWLK 60
M I + RA AE+ GD AG++K+ LL+E GLP GL PL DI E GY GF+W+
Sbjct: 1 MASQIIETNRAGAEIINGDAAGKKKSIELLQELGLPKGLFPLDDIEEFGYNRANGFMWIL 60
Query: 61 QRRKVDHFFAKAGRHXXXXXXXXXXXXKGRLRKITGVKAKELLIWVTLHEIAVDDPPTGK 120
+K +H F K + KG+L+KI GVK KEL++W+++ E+ V++ K
Sbjct: 61 HSKKKEHTFKKIKQTVSYATEVTAFVEKGKLKKIAGVKTKELMLWLSVVEVYVEESSAEK 120
Query: 121 LTCKAIGGLSRSF 133
+T K GLS SF
Sbjct: 121 ITFKTGTGLSDSF 133
>Os01g0210600 Protein of unknown function DUF538 family protein
Length = 167
Score = 95.5 bits (236), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 49/124 (39%), Positives = 68/124 (54%)
Query: 10 RAKAEVYVGDEAGQEKTRLLLEETGLPSGLLPLRDIIECGYVEETGFVWLKQRRKVDHFF 69
R AEVY G EK LL E +P GLLPL ++ E GY TGFVWL+Q++ + H F
Sbjct: 10 REGAEVYHGAALCAEKAVELLAEIHMPLGLLPLAEMEEVGYNRATGFVWLRQKKAITHTF 69
Query: 70 AKAGRHXXXXXXXXXXXXKGRLRKITGVKAKELLIWVTLHEIAVDDPPTGKLTCKAIGGL 129
+ R R++++TG K KELLIWV+L ++ +D K+T K GL
Sbjct: 70 KQISRQVSFAAEVTAFVEDRRMKRVTGAKTKELLIWVSLSDMFIDKDDASKITFKTPTGL 129
Query: 130 SRSF 133
R++
Sbjct: 130 GRTY 133
>Os11g0595000 Protein of unknown function DUF538 family protein
Length = 126
Score = 93.2 bits (230), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 46/105 (43%), Positives = 63/105 (60%)
Query: 29 LLEETGLPSGLLPLRDIIECGYVEETGFVWLKQRRKVDHFFAKAGRHXXXXXXXXXXXXK 88
LL+E LP GL PL DI E GY GF+W+ R+K +H F K + K
Sbjct: 13 LLQELNLPKGLFPLDDIEEFGYNRANGFMWILHRKKKEHTFKKIKQTVSYATEVTAFVEK 72
Query: 89 GRLRKITGVKAKELLIWVTLHEIAVDDPPTGKLTCKAIGGLSRSF 133
G+L+KITGVK KEL++W+++ E+ V++ GK+T K GLS SF
Sbjct: 73 GKLKKITGVKTKELMLWLSVVEVYVEESSAGKITFKTGTGLSDSF 117
>Os07g0120600 Protein of unknown function DUF538 family protein
Length = 142
Score = 88.2 bits (217), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 60/125 (48%), Positives = 79/125 (63%), Gaps = 1/125 (0%)
Query: 10 RAKAEVYVGDEAGQEKTRLLLEETGLPSGLLPLRDIIECGYVEETGFVWLKQR-RKVDHF 68
RA AE+ GD ++K+ LLEE GLP GLLPL DI E GY +ETGF+WL QR +K++H
Sbjct: 9 RAGAEIVSGDGVSRKKSIELLEELGLPKGLLPLEDIEEFGYNKETGFMWLVQRKKKIEHT 68
Query: 69 FAKAGRHXXXXXXXXXXXXKGRLRKITGVKAKELLIWVTLHEIAVDDPPTGKLTCKAIGG 128
F K + KG+L+KITGVK KELL+W+++ E+ V D K+T K G
Sbjct: 69 FKKIKQTVSYAGEVTAFVEKGKLKKITGVKTKELLLWLSVVEVYVADASPEKVTFKTGTG 128
Query: 129 LSRSF 133
LS +F
Sbjct: 129 LSDTF 133
>Os05g0573600
Length = 138
Score = 87.4 bits (215), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 54/125 (43%), Positives = 78/125 (62%), Gaps = 1/125 (0%)
Query: 10 RAKAEVYVGDEAGQEKTRLLLEETGLPSGLLPLRDIIECGYVEETGFVWLKQRRKVDHFF 69
R A V G E G + LLEE GLP GLLPL D++E G+ TG++W+ QRRKV+H F
Sbjct: 5 REGAVVAKGHEEGMKMAASLLEEFGLPLGLLPLGDVVEVGFARATGYMWIAQRRKVEHHF 64
Query: 70 AKAGRHXXXXXXXXXXXXKGRLRKITGVKAKELLIWVTLHEIAVDDPP-TGKLTCKAIGG 128
G+H ++K+ GVKAKEL++W ++EIAVD+P TGK+ K++ G
Sbjct: 65 RMVGKHVSYDADITGYVKPRCIKKLKGVKAKELMLWPPVNEIAVDEPSTTGKIHFKSLAG 124
Query: 129 LSRSF 133
++++F
Sbjct: 125 VTKTF 129
>Os01g0652700 Protein of unknown function DUF538 family protein
Length = 136
Score = 86.7 bits (213), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 51/124 (41%), Positives = 77/124 (62%)
Query: 10 RAKAEVYVGDEAGQEKTRLLLEETGLPSGLLPLRDIIECGYVEETGFVWLKQRRKVDHFF 69
R A V G + G + LLEE GLP GLLPL ++IE G+V TG++W+ QR+KV+H F
Sbjct: 4 REGAVVKKGPDEGMKMATALLEEFGLPLGLLPLAEVIEVGFVRATGYMWIAQRKKVEHQF 63
Query: 70 AKAGRHXXXXXXXXXXXXKGRLRKITGVKAKELLIWVTLHEIAVDDPPTGKLTCKAIGGL 129
+ ++K+ GVKAKEL++W ++EI VD+PPTGK+ K++ G+
Sbjct: 64 KMVSKQVSYDVEITGYVKAKCIKKLKGVKAKELMLWPPVNEITVDNPPTGKIHFKSLAGV 123
Query: 130 SRSF 133
+++F
Sbjct: 124 TKTF 127
>Os07g0119800 Protein of unknown function DUF538 family protein
Length = 143
Score = 83.6 bits (205), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 58/125 (46%), Positives = 78/125 (62%), Gaps = 1/125 (0%)
Query: 10 RAKAEVYVGDEAGQEKTRLLLEETGLPSGLLPLRDIIECGYVEETGFVWLKQR-RKVDHF 68
RA AE+ GD ++K+ LLEE GLP GLLPL DI E GY +ETGF+WL QR +K++H
Sbjct: 10 RAGAEIVTGDGVCRKKSIELLEELGLPKGLLPLEDIEEFGYNKETGFMWLVQRKKKIEHT 69
Query: 69 FAKAGRHXXXXXXXXXXXXKGRLRKITGVKAKELLIWVTLHEIAVDDPPTGKLTCKAIGG 128
F K + KG+L+KI GVK KELL+W+++ E+ V + K+T K G
Sbjct: 70 FKKIKQTVSYAGEVTAFVEKGKLKKIAGVKTKELLLWLSVVEVYVAEASPEKVTFKTGTG 129
Query: 129 LSRSF 133
LS +F
Sbjct: 130 LSDTF 134
>Os07g0120100 Protein of unknown function DUF538 family protein
Length = 142
Score = 82.0 bits (201), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 56/125 (44%), Positives = 77/125 (61%), Gaps = 1/125 (0%)
Query: 10 RAKAEVYVGDEAGQEKTRLLLEETGLPSGLLPLRDIIECGYVEETGFVWLKQ-RRKVDHF 68
R+ AE+ GD ++K+ LLEE GLP GLLPL DI E GY TGF+WL Q ++K++H
Sbjct: 9 RSGAEIVNGDAICRKKSIELLEELGLPKGLLPLEDIEEFGYNRGTGFMWLVQKKKKIEHT 68
Query: 69 FAKAGRHXXXXXXXXXXXXKGRLRKITGVKAKELLIWVTLHEIAVDDPPTGKLTCKAIGG 128
F K + KG+L+KITGVK KELL+W+++ E+ + D K+T K G
Sbjct: 69 FKKIKQTVSYANEVTAFTEKGKLKKITGVKTKELLLWLSVVEVYITDASPDKVTFKTGTG 128
Query: 129 LSRSF 133
LS +F
Sbjct: 129 LSDTF 133
>Os07g0118250 Protein of unknown function DUF538 family protein
Length = 142
Score = 82.0 bits (201), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 53/125 (42%), Positives = 79/125 (63%), Gaps = 1/125 (0%)
Query: 10 RAKAEVYVGDEAGQEKTRLLLEETGLPSGLLPLRDIIECGYVEETGFVWLKQR-RKVDHF 68
RA AE+ GD+ ++K+ LL E GLP GLLPL DI E GY ETGF+W+ QR +K++H
Sbjct: 9 RAGAEIVNGDDICRKKSIELLGELGLPMGLLPLEDIEEFGYNRETGFIWMVQRKKKIEHV 68
Query: 69 FAKAGRHXXXXXXXXXXXXKGRLRKITGVKAKELLIWVTLHEIAVDDPPTGKLTCKAIGG 128
F K ++ KG+L+KITGVK KEL++W+++ E+ + K+T K+ G
Sbjct: 69 FKKIKQNVSYAGEVTAFVEKGKLKKITGVKTKELMLWLSIVEVYAAEASPEKVTFKSGAG 128
Query: 129 LSRSF 133
+ ++F
Sbjct: 129 ICKTF 133
>Os07g0120000 Protein of unknown function DUF538 family protein
Length = 142
Score = 82.0 bits (201), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 53/125 (42%), Positives = 79/125 (63%), Gaps = 1/125 (0%)
Query: 10 RAKAEVYVGDEAGQEKTRLLLEETGLPSGLLPLRDIIECGYVEETGFVWLKQR-RKVDHF 68
RA AE+ GD+ ++K+ LL E GLP GLLPL DI E GY ETGF+W+ QR +K++H
Sbjct: 9 RAGAEIVNGDDICRKKSIELLGELGLPMGLLPLEDIEEFGYNRETGFIWMVQRKKKIEHV 68
Query: 69 FAKAGRHXXXXXXXXXXXXKGRLRKITGVKAKELLIWVTLHEIAVDDPPTGKLTCKAIGG 128
F K ++ KG+L+KITGVK KEL++W+++ E+ + K+T K+ G
Sbjct: 69 FKKIKQNVSYAGEVTAFVEKGKLKKITGVKTKELMLWLSIIEVYAAEASPEKVTFKSGAG 128
Query: 129 LSRSF 133
+ ++F
Sbjct: 129 ICKTF 133
>Os07g0120500 Protein of unknown function DUF538 family protein
Length = 516
Score = 80.5 bits (197), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 57/125 (45%), Positives = 78/125 (62%), Gaps = 1/125 (0%)
Query: 10 RAKAEVYVGDEAGQEKTRLLLEETGLPSGLLPLRDIIECGYVEETGFVWLKQR-RKVDHF 68
RA AE+ GD ++K+ LLEE GLP GLLPL DI E GY +TGF+W+ QR +K++H
Sbjct: 383 RASAEIVNGDAICRKKSIELLEELGLPKGLLPLEDIEEFGYNRDTGFMWMVQRKKKIEHT 442
Query: 69 FAKAGRHXXXXXXXXXXXXKGRLRKITGVKAKELLIWVTLHEIAVDDPPTGKLTCKAIGG 128
F K + KG+L+KITGVK KELL+W+++ E+ V + K+T K G
Sbjct: 443 FKKIKQTVSYAGEVTAFVEKGKLKKITGVKTKELLLWLSVVEVYVAEASPEKVTFKTGTG 502
Query: 129 LSRSF 133
LS +F
Sbjct: 503 LSDNF 507
>Os07g0118200 Protein of unknown function DUF538 family protein
Length = 236
Score = 77.4 bits (189), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 55/128 (42%), Positives = 79/128 (61%), Gaps = 1/128 (0%)
Query: 7 DDVRAKAEVYVGDEAGQEKTRLLLEETGLPSGLLPLRDIIECGYVEETGFVWLKQ-RRKV 65
++ R+ AEV GD ++++ LL E GLP GLLPL DI E GY +TGF+WL Q ++K+
Sbjct: 6 ENHRSGAEVVNGDAICRKRSIELLGELGLPKGLLPLEDIEEFGYNRDTGFMWLVQKKKKI 65
Query: 66 DHFFAKAGRHXXXXXXXXXXXXKGRLRKITGVKAKELLIWVTLHEIAVDDPPTGKLTCKA 125
+H F K + KG+L+KITGVK KELL+W+++ E+ + D K+T K
Sbjct: 66 EHTFKKIKQTVSYAREVTAFVEKGKLKKITGVKTKELLLWLSVVEVYLADASPEKVTFKT 125
Query: 126 IGGLSRSF 133
GLS +F
Sbjct: 126 GTGLSDTF 133
>Os10g0518000 Protein of unknown function DUF538 family protein
Length = 136
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 56/95 (58%), Gaps = 2/95 (2%)
Query: 39 LLPLRDIIECGYVEETGFVWLKQRRKVDHFFAKAGRHXXXXXXXXXXXXKGRLRKITGVK 98
++PLR + ECG V ETGFVW++Q+ +H+F G +GR++++TGV+
Sbjct: 1 MMPLRGLEECGLVRETGFVWMRQKAPYEHYFRGTGTRVRYDVEVTAFVEEGRMKRMTGVR 60
Query: 99 AKELLIWVTLHEIAVDDPPTGKLTCKAIGGLSRSF 133
L++WV + E+++D ++ K+ G+ RSF
Sbjct: 61 RGRLMLWVPIVEMSLDG--ADRVYFKSNVGIGRSF 93
>Os06g0538900 Protein of unknown function DUF538 family protein
Length = 165
Score = 67.8 bits (164), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 53/135 (39%), Positives = 71/135 (52%), Gaps = 3/135 (2%)
Query: 1 MTLTIPDDVRAKAEVYVGDEAGQEKTRLLLEETGLPSGLLPLRDIIECGYVEETGFVWLK 60
M + ++ R+ AEV+ G E + K R LL E GLP GLLPL + E GY GFVWL+
Sbjct: 1 MASQLVEEHRSGAEVHTGHELCERKARELLVELGLPDGLLPLPSLEEVGYNRAAGFVWLR 60
Query: 61 QRRK--VDHFFAKAGRHXXXXXXXXXXXXKGRLRKITGVKAKELLIWVTLHEIAVDDPPT 118
Q + H F G+ +GR+ + GVK+KELLIWV++ EI V P
Sbjct: 61 QTQAGGATHTFDTIGKQVWYAGEVTAFVEQGRMHGVAGVKSKELLIWVSISEI-VLSPSG 119
Query: 119 GKLTCKAIGGLSRSF 133
KL + GL R+
Sbjct: 120 TKLVFRTPAGLGRAL 134
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.317 0.136 0.396
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 4,945,186
Number of extensions: 158944
Number of successful extensions: 333
Number of sequences better than 1.0e-10: 17
Number of HSP's gapped: 319
Number of HSP's successfully gapped: 17
Length of query: 203
Length of database: 17,035,801
Length adjustment: 96
Effective length of query: 107
Effective length of database: 12,023,257
Effective search space: 1286488499
Effective search space used: 1286488499
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 153 (63.5 bits)