Os07g0120600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF538 family protein.
FiT-DB / Search/ Help/ Sample detail
|
Os07g0120600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Protein of unknown function DUF538 family protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 112.63 | 0.499 | 5.33 | 2.75 | 0.745 | -1.66 | -0.672 | 0.78 | 0.769 | 18 | 21.6 | 1565 | -- | -- |
| 113.08 | 0.495 | 5.36 | 2.52 | 0.756 | -1.61 | -0.713 | -- | 0.706 | 18 | 21.45 | 1579 | -- | -- |
| 113.69 | 0.497 | 5.33 | 2.77 | 0.756 | -1.67 | -- | 0.837 | 0.767 | 18.1 | 21.67 | 1580 | -- | -- |
| 114.08 | 0.497 | 5.36 | 2.52 | 0.759 | -1.63 | -- | -- | 0.703 | 18.1 | 21.4 | 1596 | -- | -- |
| 136.65 | 0.544 | 5.31 | 2.8 | -- | -1.7 | -- | 0.964 | 0.777 | -- | 21.6 | 1379 | -- | -- |
| 201.78 | 0.666 | 5.44 | 1.93 | 0.743 | -- | -0.595 | -- | 0.326 | 17.8 | -- | -- | -- | -- |
| 202.62 | 0.667 | 5.45 | 1.93 | 0.74 | -- | -- | -- | 0.324 | 17.9 | -- | -- | -- | -- |
| 137.04 | 0.545 | 5.35 | 2.51 | -- | -1.65 | -- | -- | 0.695 | -- | 21.2 | 1382 | -- | -- |
| 264.87 | 0.758 | 5.46 | -- | 0.657 | -0.952 | -- | -- | 0.286 | 18.4 | 22.2 | 1414 | -- | -- |
| 231 | 0.71 | 5.43 | 1.91 | -- | -- | -- | -- | 0.307 | -- | -- | -- | -- | -- |
| 301.2 | 0.812 | 5.49 | -- | 0.711 | -- | -- | -- | 0.108 | 18 | -- | -- | -- | -- |
| 286.73 | 0.789 | 5.44 | -- | -- | -1.01 | -- | -- | 0.282 | -- | 22.2 | 1354 | -- | -- |
| 327.39 | 0.845 | 5.48 | -- | -- | -- | -- | -- | 0.0945 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 114.25 | temperature | 25 | 1440 | > th | dose independent | rect. | 15 | 7 |
| 2 | 114.54 | temperature | 20 | 1440 | > th | dose dependent | rect. | 15 | 23 |
| 3 | 114.57 | temperature | 20 | 1440 | > th | dose dependent | rect. | 11 | 23 |
| 4 | 114.58 | temperature | 20 | 1440 | > th | dose dependent | rect. | 9 | 22 |
| 6 | 114.59 | temperature | 20 | 1440 | > th | dose dependent | rect. | 23 | 23 |
| 10 | 114.61 | temperature | 20 | 1440 | > th | dose dependent | rect. | 13 | 23 |
| 30 | 114.69 | temperature | 20 | 1440 | > th | dose dependent | no | NA | NA |
| 45 | 114.77 | temperature | 20 | 1440 | > th | dose dependent | rect. | 20 | 23 |
| 111 | 115.26 | temperature | 25 | 1440 | < th | dose independent | rect. | 15 | 7 |
| 120 | 115.29 | temperature | 20 | 1440 | > th | dose dependent | sin | 16 | NA |
| 189 | 115.84 | temperature | 20 | 1440 | > th | dose dependent | sin | 5 | NA |
| 228 | 116.18 | temperature | 20 | 1440 | > th | dose dependent | rect. | 15 | 9 |
| 231 | 116.22 | temperature | 20 | 1440 | > th | dose dependent | rect. | 18 | 3 |
| 232 | 116.23 | temperature | 20 | 1440 | > th | dose dependent | rect. | 16 | 6 |
| 283 | 116.72 | temperature | 20 | 1440 | > th | dose dependent | rect. | 20 | 1 |
| 291 | 116.79 | temperature | 25 | 1440 | > th | dose dependent | rect. | 9 | 8 |
| 313 | 116.93 | temperature | 25 | 1440 | > th | dose dependent | rect. | 8 | 11 |
| 366 | 117.45 | temperature | 25 | 1440 | > th | dose independent | rect. | 6 | 16 |
| 416 | 117.81 | temperature | 20 | 1440 | > th | dose dependent | rect. | 2 | 8 |
| 426 | 117.91 | temperature | 25 | 1440 | > th | dose dependent | rect. | 11 | 3 |
| 429 | 117.92 | temperature | 25 | 1440 | < th | dose independent | rect. | 6 | 17 |
| 581 | 119.07 | temperature | 25 | 1440 | > th | dose independent | rect. | 19 | 2 |
| 748 | 119.52 | temperature | 30 | 1440 | < th | dose dependent | rect. | 18 | 1 |
| 875 | 119.77 | temperature | 30 | 1440 | < th | dose dependent | rect. | 16 | 5 |
| 883 | 119.80 | temperature | 25 | 1440 | < th | dose independent | rect. | 19 | 1 |
| 938 | 119.92 | temperature | 20 | 1440 | > th | dose dependent | rect. | 6 | 1 |