Os11g0594800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF538 family protein.
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Os11g0594800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein of unknown function DUF538 family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 193.5 | 0.654 | 3.36 | -1.46 | 0.571 | 0.902 | -1.76 | -4.55 | -0.426 | 11 | 87 | 3685 | -- | -- |
| 213.21 | 0.68 | 3.41 | -0.971 | 0.51 | 0.78 | -1.42 | -- | -0.353 | 11.3 | 86.99 | 4316 | -- | -- |
| 205.92 | 0.668 | 3.37 | -1.46 | 0.575 | 0.906 | -- | -3.86 | -0.413 | 11.2 | 87 | 3622 | -- | -- |
| 220.62 | 0.692 | 3.41 | -1.03 | 0.601 | 0.72 | -- | -- | -0.294 | 11.3 | 87 | 3806 | -- | -- |
| 222.14 | 0.694 | 3.38 | -1.48 | -- | 0.686 | -- | -3.61 | -0.425 | -- | 87 | 4322 | -- | -- |
| 220.94 | 0.697 | 3.34 | -1.08 | 0.519 | -- | -1.31 | -- | -0.00201 | 11.4 | -- | -- | -- | -- |
| 228.34 | 0.708 | 3.34 | -1.13 | 0.525 | -- | -- | -- | -0.00654 | 11.6 | -- | -- | -- | -- |
| 237.65 | 0.718 | 3.43 | -1.03 | -- | 0.759 | -- | -- | -0.355 | -- | 86 | 4389 | -- | -- |
| 246.12 | 0.731 | 3.41 | -- | 0.573 | 1.09 | -- | -- | -0.333 | 11.7 | 87.26 | 4090 | -- | -- |
| 245.68 | 0.732 | 3.35 | -1.15 | -- | -- | -- | -- | -0.0125 | -- | -- | -- | -- | -- |
| 262.13 | 0.757 | 3.31 | -- | 0.538 | -- | -- | -- | 0.12 | 11.7 | -- | -- | -- | -- |
| 263.58 | 0.756 | 3.43 | -- | -- | 1.03 | -- | -- | -0.346 | -- | 88 | 4363 | -- | -- |
| 280.37 | 0.782 | 3.32 | -- | -- | -- | -- | -- | 0.115 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 187.44 | radiation | 1 | 270 | < th | dose independent | rect. | 10 | 2 |
| 2 | 187.44 | radiation | 1 | 270 | < th | dose dependent | rect. | 10 | 2 |
| 3 | 189.34 | humidity | 70 | 14400 | > th | dose dependent | rect. | 19 | 10 |
| 7 | 189.61 | humidity | 50 | 14400 | > th | dose dependent | rect. | 20 | 9 |
| 12 | 189.69 | wind | 7 | 4320 | > th | dose dependent | rect. | 15 | 1 |
| 30 | 190.09 | radiation | 1 | 270 | < th | dose independent | rect. | 8 | 5 |
| 31 | 190.09 | radiation | 1 | 270 | < th | dose dependent | rect. | 8 | 5 |
| 34 | 190.18 | wind | 9 | 4320 | > th | dose independent | rect. | 15 | 1 |
| 67 | 191.21 | wind | 7 | 4320 | < th | dose independent | rect. | 15 | 2 |
| 79 | 191.36 | radiation | 10 | 10 | < th | dose dependent | rect. | 6 | 8 |
| 83 | 191.39 | humidity | 90 | 14400 | < th | dose dependent | rect. | 21 | 3 |
| 88 | 191.43 | wind | 7 | 4320 | > th | dose dependent | rect. | 14 | 5 |
| 92 | 191.47 | humidity | 90 | 14400 | < th | dose dependent | rect. | 22 | 1 |
| 141 | 192.09 | wind | 9 | 4320 | > th | dose independent | rect. | 13 | 6 |
| 145 | 192.13 | humidity | 50 | 14400 | > th | dose dependent | rect. | 1 | 6 |
| 191 | 192.55 | radiation | 1 | 1440 | < th | dose independent | rect. | 11 | 1 |
| 192 | 192.55 | radiation | 1 | 1440 | < th | dose dependent | rect. | 11 | 1 |
| 193 | 192.56 | humidity | 80 | 14400 | > th | dose independent | rect. | 17 | 6 |
| 203 | 192.66 | wind | 3 | 4320 | > th | dose dependent | rect. | 18 | 2 |
| 225 | 192.86 | humidity | 70 | 14400 | > th | dose dependent | sin | 11 | NA |
| 314 | 193.54 | wind | 5 | 4320 | < th | dose independent | rect. | 18 | 2 |
| 316 | 193.55 | radiation | 1 | 10 | < th | dose independent | rect. | 11 | 3 |
| 324 | 193.55 | radiation | 1 | 10 | < th | dose dependent | rect. | 11 | 3 |
| 359 | 193.74 | wind | 5 | 4320 | > th | dose independent | rect. | 18 | 2 |
| 376 | 193.90 | humidity | 80 | 14400 | > th | dose independent | rect. | 18 | 2 |
| 378 | 193.91 | humidity | 90 | 4320 | > th | dose independent | rect. | 1 | 2 |
| 480 | 194.44 | humidity | 90 | 4320 | < th | dose independent | rect. | 24 | 11 |
| 513 | 194.58 | humidity | 80 | 14400 | > th | dose dependent | rect. | 6 | 1 |
| 531 | 194.64 | wind | 9 | 4320 | < th | dose dependent | rect. | 18 | 2 |
| 549 | 194.69 | humidity | 90 | 4320 | > th | dose independent | rect. | 24 | 11 |
| 592 | 194.83 | humidity | 80 | 4320 | > th | dose independent | rect. | 22 | 2 |
| 631 | 195.02 | humidity | 90 | 4320 | < th | dose independent | rect. | 6 | 4 |
| 634 | 195.03 | humidity | 80 | 14400 | < th | dose independent | rect. | 17 | 6 |
| 646 | 195.09 | humidity | 90 | 4320 | < th | dose independent | rect. | 1 | 2 |
| 651 | 195.11 | radiation | 20 | 14400 | > th | dose independent | rect. | 16 | 2 |
| 715 | 195.29 | humidity | 80 | 14400 | > th | dose independent | sin | 14 | NA |
| 724 | 195.36 | humidity | 90 | 4320 | < th | dose independent | rect. | 6 | 1 |
| 832 | 195.64 | wind | 9 | 4320 | < th | dose dependent | rect. | 15 | 13 |
| 883 | 195.80 | humidity | 80 | 14400 | < th | dose independent | rect. | 18 | 2 |
| 907 | 195.86 | humidity | 90 | 4320 | < th | dose independent | sin | 6 | NA |
| 941 | 195.94 | humidity | 80 | 30 | > th | dose independent | rect. | 6 | 5 |