Os07g0120100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF538 family protein.
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Os07g0120100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein of unknown function DUF538 family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = wind,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 276.45 | 0.781 | 6.77 | -0.169 | 0.647 | 3.81 | 0.257 | 6.29 | 0.032 | 8.35 | 5.869 | 2542 | -- | -- |
| 288.15 | 0.791 | 6.68 | -0.185 | 0.707 | 3.04 | 0.145 | -- | 0.14 | 8.33 | 5.707 | 2356 | -- | -- |
| 276.65 | 0.775 | 6.77 | -0.167 | 0.648 | 3.81 | -- | 6.23 | 0.0325 | 8.3 | 5.868 | 2541 | -- | -- |
| 286.69 | 0.789 | 6.67 | -0.315 | 0.737 | 2.97 | -- | -- | 0.0633 | 8.29 | 5.6 | 2298 | -- | -- |
| 299.01 | 0.805 | 6.79 | -0.195 | -- | 3.71 | -- | 6.33 | 0.0416 | -- | 5.8 | 2599 | -- | -- |
| 385.76 | 0.921 | 6.71 | -1.05 | 0.569 | -- | 0.267 | -- | -0.0874 | 7.05 | -- | -- | -- | -- |
| 385.92 | 0.92 | 6.71 | -1.05 | 0.571 | -- | -- | -- | -0.0884 | 6.94 | -- | -- | -- | -- |
| 310.03 | 0.82 | 6.68 | -0.347 | -- | 2.65 | -- | -- | 0.0948 | -- | 5.643 | 2596 | -- | -- |
| 289.2 | 0.792 | 6.66 | -- | 0.793 | 3.21 | -- | -- | 0.0996 | 8.21 | 5.543 | 2167 | -- | -- |
| 403.03 | 0.938 | 6.72 | -1.03 | -- | -- | -- | -- | -0.0777 | -- | -- | -- | -- | -- |
| 414.73 | 0.953 | 6.68 | -- | 0.559 | -- | -- | -- | 0.028 | 7.05 | -- | -- | -- | -- |
| 312.83 | 0.824 | 6.67 | -- | -- | 2.81 | -- | -- | 0.138 | -- | 5.694 | 2592 | -- | -- |
| 431.2 | 0.969 | 6.7 | -- | -- | -- | -- | -- | 0.0369 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 280.06 | wind | 5 | 4320 | > th | dose dependent | rect. | 21 | 2 |
| 2 | 280.41 | wind | 7 | 4320 | > th | dose independent | rect. | 8 | 1 |
| 4 | 284.20 | wind | 5 | 4320 | > th | dose dependent | rect. | 18 | 9 |
| 5 | 284.99 | wind | 7 | 4320 | > th | dose dependent | rect. | 8 | 1 |
| 11 | 286.41 | wind | 7 | 1440 | < th | dose independent | rect. | 3 | 6 |
| 14 | 286.68 | wind | 7 | 1440 | > th | dose independent | rect. | 4 | 5 |
| 19 | 287.69 | wind | 5 | 4320 | > th | dose dependent | sin | 12 | NA |
| 29 | 288.41 | wind | 5 | 4320 | > th | dose independent | sin | 12 | NA |
| 32 | 288.88 | wind | 7 | 4320 | < th | dose independent | rect. | 21 | 3 |
| 35 | 289.10 | wind | 7 | 4320 | < th | dose independent | rect. | 8 | 1 |
| 49 | 290.05 | wind | 5 | 4320 | > th | dose dependent | rect. | 16 | 18 |
| 57 | 290.37 | wind | 7 | 1440 | > th | dose dependent | rect. | 3 | 6 |
| 60 | 290.57 | wind | 5 | 4320 | > th | dose independent | rect. | 20 | 3 |
| 66 | 291.24 | wind | 5 | 4320 | < th | dose independent | sin | 12 | NA |
| 68 | 291.43 | wind | 5 | 4320 | > th | dose independent | rect. | 20 | 6 |
| 71 | 291.69 | wind | 5 | 4320 | > th | dose independent | rect. | 19 | 8 |
| 75 | 291.84 | wind | 7 | 1440 | < th | dose independent | rect. | 23 | 11 |
| 83 | 292.21 | wind | 5 | 4320 | > th | dose independent | rect. | 16 | 18 |
| 86 | 292.30 | wind | 7 | 4320 | < th | dose independent | rect. | 18 | 9 |
| 106 | 293.25 | wind | 5 | 4320 | > th | dose independent | rect. | 17 | 11 |
| 112 | 293.42 | wind | 5 | 4320 | > th | dose independent | rect. | 16 | 13 |
| 134 | 294.04 | wind | 5 | 4320 | < th | dose independent | rect. | 20 | 6 |
| 142 | 294.28 | wind | 7 | 4320 | > th | dose independent | rect. | 18 | 4 |
| 143 | 294.40 | wind | 7 | 4320 | < th | dose independent | rect. | 18 | 4 |
| 163 | 295.11 | wind | 5 | 4320 | < th | dose independent | rect. | 16 | 18 |
| 330 | 298.72 | wind | 3 | 4320 | > th | dose dependent | rect. | 24 | 1 |
| 432 | 299.99 | wind | 5 | 4320 | < th | dose independent | rect. | 24 | 1 |
| 462 | 300.41 | wind | 5 | 4320 | > th | dose independent | rect. | 19 | 22 |
| 595 | 302.16 | wind | 5 | 4320 | > th | dose independent | rect. | 7 | 22 |
| 684 | 303.19 | wind | 5 | 1440 | < th | dose independent | rect. | 12 | 22 |
| 713 | 303.50 | wind | 5 | 4320 | > th | dose independent | no | NA | NA |
| 721 | 303.57 | wind | 5 | 4320 | < th | dose independent | rect. | 19 | 22 |
| 764 | 304.01 | wind | 5 | 4320 | > th | dose independent | rect. | 24 | 1 |
| 788 | 304.25 | wind | 5 | 4320 | > th | dose independent | rect. | 4 | 23 |
| 815 | 304.62 | wind | 5 | 1440 | < th | dose independent | rect. | 20 | 19 |
| 829 | 304.79 | wind | 5 | 4320 | > th | dose independent | rect. | 24 | 23 |
| 846 | 304.95 | wind | 5 | 4320 | < th | dose independent | rect. | 7 | 22 |
| 849 | 304.96 | wind | 5 | 4320 | > th | dose independent | rect. | 2 | 23 |
| 890 | 305.35 | wind | 5 | 1440 | > th | dose independent | rect. | 22 | 23 |
| 974 | 306.03 | wind | 5 | 1440 | < th | dose independent | no | NA | NA |