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Os12g0563600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
Description : Protein of unknown function DUF538 family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = no)
deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|
100.45 | 0.471 | 11.1 | -1.48 | 2.57 | -0.642 | -0.618 | 1.39 | -0.585 | 7.8 | 24.9 | 1379 | -- | -- |
101.42 | 0.469 | 11.1 | -1.1 | 2.65 | -0.58 | -0.503 | -- | -0.475 | 7.9 | 24.5 | 1015 | -- | -- |
101.54 | 0.469 | 11.1 | -1.49 | 2.57 | -0.639 | -- | 1.37 | -0.583 | 7.79 | 24.82 | 1380 | -- | -- |
102.37 | 0.471 | 11.1 | -1.1 | 2.65 | -0.557 | -- | -- | -0.478 | 7.89 | 24.5 | 1022 | -- | -- |
458.84 | 0.998 | 11.1 | -1.32 | -- | -0.676 | -- | 0.823 | -0.48 | -- | 24.5 | 1389 | -- | -- |
111.71 | 0.496 | 11 | -0.878 | 2.59 | -- | -0.591 | -- | -0.262 | 7.7 | -- | -- | -- | -- |
112.7 | 0.497 | 11 | -0.894 | 2.6 | -- | -- | -- | -0.261 | 7.68 | -- | -- | -- | -- |
459.91 | 0.999 | 11.1 | -1.08 | -- | -0.681 | -- | -- | -0.473 | -- | 24.5 | 1395 | -- | -- |
130.52 | 0.532 | 11 | -- | 2.61 | -0.284 | -- | -- | -0.265 | 7.81 | 24.6 | 1022 | -- | -- |
475.51 | 1.02 | 11.1 | -0.859 | -- | -- | -- | -- | -0.223 | -- | -- | -- | -- | -- |
133.75 | 0.541 | 11 | -- | 2.59 | -- | -- | -- | -0.162 | 7.71 | -- | -- | -- | -- |
354.31 | 0.877 | 10.9 | -- | -- | 1.61 | -- | -- | 0.292 | -- | 26.4 | 532 | -- | -- |
494.99 | 1.04 | 11.1 | -- | -- | -- | -- | -- | -0.128 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance![]() |
Histogram![]() ![]() |
Local optima within top1000 grid-points
rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
---|---|---|---|---|---|---|---|---|---|
1 | 89.70 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 18 | 13 |
5 | 91.68 | wind | 7.0 | 720 | < th | dose independent | rect. | 7 | 3 |
6 | 91.89 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 4 | 1 |
7 | 91.96 | radiation | 10.0 | 270 | < th | dose independent | rect. | 18 | 13 |
8 | 92.04 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 4 | 3 |
9 | 92.36 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 19 | 3 |
13 | 92.67 | radiation | 40.0 | 720 | < th | dose dependent | rect. | 19 | 12 |
16 | 92.80 | temperature | 30.0 | 720 | < th | dose dependent | rect. | 22 | 4 |
22 | 92.97 | temperature | 30.0 | 720 | < th | dose dependent | rect. | 23 | 2 |
24 | 92.99 | wind | 1.0 | 720 | > th | dose independent | rect. | 7 | 3 |
25 | 93.04 | atmosphere | 995.0 | 720 | > th | dose dependent | rect. | 7 | 3 |
26 | 93.06 | wind | 9.0 | 720 | < th | dose independent | rect. | 19 | 3 |
27 | 93.16 | temperature | 10.0 | 720 | > th | dose dependent | rect. | 2 | 5 |
30 | 93.22 | temperature | 10.0 | 720 | > th | dose independent | rect. | 19 | 3 |
31 | 93.22 | temperature | 30.0 | 720 | < th | dose independent | rect. | 19 | 3 |
32 | 93.22 | humidity | 50.0 | 720 | > th | dose independent | rect. | 19 | 3 |
33 | 93.22 | atmosphere | 995.0 | 720 | > th | dose independent | rect. | 19 | 3 |
34 | 93.22 | radiation | 1.0 | 720 | < th | dose independent | rect. | 19 | 3 |
39 | 93.22 | precipitation | 0.1 | 720 | < th | dose independent | rect. | 7 | 3 |
40 | 93.22 | temperature | 10.0 | 720 | > th | dose independent | rect. | 22 | 21 |
41 | 93.22 | radiation | 1.0 | 720 | < th | dose dependent | rect. | 19 | 3 |
46 | 93.22 | precipitation | 0.1 | 720 | < th | dose dependent | rect. | 7 | 3 |
47 | 93.24 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 22 | 11 |
50 | 93.31 | temperature | 10.0 | 720 | > th | dose independent | rect. | 7 | 3 |
51 | 93.31 | atmosphere | 995.0 | 720 | > th | dose independent | rect. | 7 | 3 |
52 | 93.31 | atmosphere | 1015.0 | 720 | < th | dose independent | rect. | 7 | 3 |
53 | 93.31 | temperature | 10.0 | 720 | > th | dose independent | rect. | 10 | 21 |
56 | 93.36 | precipitation | 0.1 | 720 | < th | dose independent | rect. | 19 | 3 |
57 | 93.36 | precipitation | 0.1 | 720 | < th | dose dependent | rect. | 19 | 3 |
61 | 93.46 | atmosphere | 1015.0 | 720 | < th | dose independent | rect. | 19 | 3 |
63 | 93.50 | wind | 9.0 | 720 | < th | dose independent | rect. | 19 | 12 |
65 | 93.52 | temperature | 10.0 | 10 | > th | dose dependent | rect. | 20 | 13 |
69 | 93.62 | temperature | 30.0 | 720 | < th | dose independent | rect. | 7 | 3 |
70 | 93.62 | humidity | 50.0 | 720 | > th | dose independent | rect. | 7 | 3 |
72 | 93.64 | wind | 9.0 | 270 | < th | dose independent | rect. | 7 | 11 |
73 | 93.66 | temperature | 10.0 | 720 | > th | dose independent | rect. | 7 | 12 |
74 | 93.66 | temperature | 10.0 | 720 | > th | dose independent | rect. | 19 | 12 |
75 | 93.66 | temperature | 30.0 | 720 | < th | dose independent | rect. | 19 | 12 |
76 | 93.66 | humidity | 50.0 | 720 | > th | dose independent | rect. | 19 | 12 |
77 | 93.66 | atmosphere | 995.0 | 720 | > th | dose independent | rect. | 19 | 12 |
78 | 93.66 | atmosphere | 1015.0 | 720 | < th | dose independent | rect. | 7 | 12 |
97 | 94.10 | temperature | 20.0 | 720 | > th | dose independent | rect. | 19 | 3 |
103 | 94.19 | precipitation | 0.1 | 720 | < th | dose independent | rect. | 19 | 12 |
104 | 94.19 | precipitation | 0.1 | 720 | < th | dose dependent | rect. | 19 | 12 |
107 | 94.27 | wind | 9.0 | 720 | < th | dose dependent | rect. | 19 | 3 |
117 | 94.71 | radiation | 1.0 | 720 | > th | dose independent | rect. | 7 | 3 |
118 | 94.76 | temperature | 25.0 | 30 | < th | dose independent | sin | 7 | NA |
121 | 94.81 | temperature | 20.0 | 270 | > th | dose independent | rect. | 18 | 13 |
126 | 94.90 | wind | 1.0 | 720 | > th | dose independent | rect. | 7 | 12 |
136 | 95.10 | wind | 9.0 | 720 | < th | dose independent | rect. | 22 | 21 |
141 | 95.24 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 7 | 11 |
142 | 95.24 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 7 | 11 |
146 | 95.30 | precipitation | 0.1 | 720 | < th | dose independent | rect. | 10 | 6 |
147 | 95.30 | precipitation | 0.1 | 720 | < th | dose dependent | rect. | 10 | 6 |
167 | 95.37 | temperature | 25.0 | 90 | < th | dose independent | rect. | 23 | 12 |
169 | 95.41 | temperature | 10.0 | 720 | > th | dose independent | rect. | 10 | 6 |
170 | 95.41 | atmosphere | 1015.0 | 720 | < th | dose independent | rect. | 10 | 6 |
171 | 95.41 | temperature | 10.0 | 720 | > th | dose independent | rect. | 16 | 18 |
174 | 95.43 | temperature | 10.0 | 720 | > th | dose independent | rect. | 22 | 6 |
175 | 95.43 | temperature | 30.0 | 720 | < th | dose independent | rect. | 22 | 6 |
176 | 95.43 | humidity | 50.0 | 720 | > th | dose independent | rect. | 22 | 6 |
179 | 95.43 | atmosphere | 995.0 | 720 | > th | dose independent | rect. | 22 | 6 |
180 | 95.43 | radiation | 1.0 | 720 | < th | dose independent | rect. | 22 | 6 |
186 | 95.43 | temperature | 10.0 | 720 | > th | dose independent | rect. | 4 | 18 |
188 | 95.43 | radiation | 1.0 | 720 | < th | dose dependent | rect. | 22 | 6 |
199 | 95.51 | wind | 9.0 | 720 | < th | dose independent | rect. | 22 | 6 |
204 | 95.53 | humidity | 80.0 | 720 | > th | dose independent | rect. | 4 | 3 |
224 | 95.74 | humidity | 70.0 | 720 | > th | dose independent | rect. | 2 | 5 |
227 | 95.75 | radiation | 10.0 | 43200 | < th | dose dependent | rect. | 20 | 6 |
228 | 95.77 | temperature | 10.0 | 720 | > th | dose independent | rect. | 14 | 5 |
229 | 95.77 | atmosphere | 1015.0 | 720 | < th | dose independent | rect. | 14 | 5 |
230 | 95.77 | atmosphere | 1015.0 | 720 | < th | dose independent | rect. | 4 | 18 |
231 | 95.77 | temperature | 10.0 | 720 | > th | dose independent | rect. | 19 | 19 |
232 | 95.77 | atmosphere | 995.0 | 720 | > th | dose independent | rect. | 19 | 19 |
234 | 95.79 | radiation | 20.0 | 720 | < th | dose independent | rect. | 2 | 5 |
245 | 95.93 | wind | 9.0 | 720 | < th | dose independent | rect. | 10 | 21 |
249 | 95.98 | temperature | 20.0 | 270 | > th | dose independent | rect. | 3 | 19 |
251 | 96.00 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 7 | 11 |
252 | 96.01 | wind | 9.0 | 720 | < th | dose independent | rect. | 2 | 5 |
253 | 96.01 | temperature | 10.0 | 720 | > th | dose independent | rect. | 2 | 5 |
254 | 96.01 | temperature | 30.0 | 720 | < th | dose independent | rect. | 2 | 5 |
255 | 96.01 | humidity | 50.0 | 720 | > th | dose independent | rect. | 2 | 5 |
257 | 96.01 | atmosphere | 995.0 | 720 | > th | dose independent | rect. | 2 | 5 |
260 | 96.01 | temperature | 10.0 | 720 | > th | dose independent | rect. | 7 | 19 |
261 | 96.02 | precipitation | 0.1 | 720 | < th | dose independent | rect. | 10 | 21 |
262 | 96.02 | precipitation | 0.1 | 720 | < th | dose dependent | rect. | 10 | 21 |
263 | 96.04 | atmosphere | 995.0 | 10 | > th | dose dependent | rect. | 9 | 11 |
264 | 96.05 | radiation | 40.0 | 720 | < th | dose dependent | rect. | 4 | 3 |
265 | 96.06 | atmosphere | 995.0 | 720 | > th | dose dependent | rect. | 16 | 1 |
272 | 96.09 | wind | 1.0 | 720 | > th | dose independent | rect. | 14 | 5 |
278 | 96.10 | temperature | 10.0 | 90 | > th | dose dependent | rect. | 4 | 12 |
280 | 96.11 | atmosphere | 1015.0 | 720 | < th | dose dependent | rect. | 11 | 3 |
283 | 96.13 | wind | 9.0 | 720 | < th | dose independent | rect. | 1 | 9 |
285 | 96.17 | temperature | 25.0 | 10 | < th | dose dependent | rect. | 24 | 11 |
286 | 96.18 | humidity | 50.0 | 720 | > th | dose dependent | rect. | 4 | 3 |
292 | 96.22 | radiation | 1.0 | 30 | < th | dose independent | rect. | 22 | 23 |
295 | 96.26 | wind | 7.0 | 720 | < th | dose independent | rect. | 23 | 11 |
297 | 96.27 | wind | 1.0 | 720 | > th | dose independent | rect. | 19 | 3 |
298 | 96.27 | temperature | 20.0 | 720 | > th | dose independent | rect. | 10 | 21 |
300 | 96.30 | temperature | 10.0 | 720 | > th | dose independent | rect. | 1 | 9 |
301 | 96.30 | atmosphere | 995.0 | 720 | > th | dose independent | rect. | 1 | 9 |
302 | 96.30 | temperature | 10.0 | 720 | > th | dose independent | rect. | 10 | 15 |
304 | 96.31 | precipitation | 0.1 | 720 | < th | dose independent | rect. | 22 | 6 |
306 | 96.31 | precipitation | 0.1 | 720 | < th | dose dependent | rect. | 22 | 6 |
313 | 96.35 | wind | 9.0 | 720 | < th | dose independent | rect. | 14 | 5 |
320 | 96.38 | radiation | 1.0 | 30 | < th | dose dependent | rect. | 22 | 23 |
323 | 96.41 | humidity | 50.0 | 270 | > th | dose independent | rect. | 3 | 11 |
357 | 96.55 | atmosphere | 1015.0 | 270 | < th | dose dependent | rect. | 10 | 12 |
367 | 96.58 | temperature | 10.0 | 720 | > th | dose independent | rect. | 13 | 9 |
368 | 96.58 | temperature | 10.0 | 720 | > th | dose independent | rect. | 22 | 15 |
369 | 96.58 | atmosphere | 995.0 | 720 | > th | dose independent | rect. | 22 | 15 |
370 | 96.58 | precipitation | 0.1 | 720 | < th | dose independent | rect. | 4 | 18 |
372 | 96.58 | precipitation | 0.1 | 720 | < th | dose dependent | rect. | 4 | 18 |
374 | 96.59 | wind | 9.0 | 720 | < th | dose independent | rect. | 19 | 19 |
378 | 96.63 | radiation | 10.0 | 720 | < th | dose independent | rect. | 4 | 3 |
389 | 96.70 | wind | 9.0 | 720 | < th | dose independent | rect. | 16 | 18 |
419 | 96.74 | temperature | 10.0 | 720 | > th | dose independent | rect. | 23 | 11 |
420 | 96.74 | atmosphere | 995.0 | 720 | > th | dose independent | rect. | 23 | 11 |
421 | 96.74 | temperature | 10.0 | 720 | > th | dose independent | rect. | 10 | 13 |
426 | 96.76 | wind | 9.0 | 270 | < th | dose independent | rect. | 14 | 13 |
435 | 96.81 | wind | 9.0 | 720 | < th | dose independent | rect. | 22 | 13 |
449 | 96.87 | temperature | 10.0 | 720 | > th | dose independent | rect. | 4 | 9 |
450 | 96.87 | atmosphere | 995.0 | 720 | > th | dose independent | rect. | 4 | 9 |
451 | 96.87 | atmosphere | 1015.0 | 720 | < th | dose independent | rect. | 4 | 9 |
452 | 96.87 | temperature | 10.0 | 720 | > th | dose independent | rect. | 13 | 15 |
463 | 96.88 | radiation | 1.0 | 30 | > th | dose independent | rect. | 5 | 11 |
476 | 96.89 | humidity | 50.0 | 720 | > th | dose independent | rect. | 1 | 9 |
478 | 96.90 | temperature | 10.0 | 720 | > th | dose independent | rect. | 11 | 11 |
479 | 96.90 | temperature | 10.0 | 720 | > th | dose independent | rect. | 22 | 13 |
480 | 96.90 | atmosphere | 995.0 | 720 | > th | dose independent | rect. | 22 | 13 |
489 | 96.95 | precipitation | 0.1 | 720 | < th | dose independent | rect. | 2 | 5 |
491 | 96.95 | precipitation | 0.1 | 720 | < th | dose dependent | rect. | 2 | 5 |
500 | 96.98 | radiation | 40.0 | 720 | < th | dose independent | rect. | 16 | 3 |
505 | 96.99 | atmosphere | 1015.0 | 720 | < th | dose independent | rect. | 11 | 11 |
507 | 97.02 | temperature | 25.0 | 720 | < th | dose independent | sin | 12 | NA |
510 | 97.03 | atmosphere | 995.0 | 720 | > th | dose independent | rect. | 16 | 18 |
513 | 97.04 | temperature | 30.0 | 720 | < th | dose independent | rect. | 23 | 11 |
514 | 97.04 | humidity | 50.0 | 720 | > th | dose independent | rect. | 23 | 11 |
518 | 97.05 | temperature | 10.0 | 720 | > th | dose independent | rect. | 16 | 9 |
519 | 97.05 | radiation | 40.0 | 720 | < th | dose independent | rect. | 16 | 9 |
521 | 97.05 | temperature | 10.0 | 720 | > th | dose independent | rect. | 1 | 15 |
526 | 97.07 | wind | 9.0 | 720 | < th | dose independent | rect. | 16 | 3 |
532 | 97.07 | atmosphere | 1015.0 | 720 | < th | dose independent | rect. | 4 | 3 |
534 | 97.07 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 3 | 11 |
538 | 97.07 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 3 | 11 |
540 | 97.08 | temperature | 25.0 | 720 | < th | dose independent | rect. | 14 | 14 |
553 | 97.11 | temperature | 10.0 | 30 | > th | dose dependent | rect. | 4 | 21 |
554 | 97.12 | wind | 7.0 | 90 | < th | dose independent | rect. | 16 | 12 |
614 | 97.31 | precipitation | 0.1 | 720 | < th | dose independent | rect. | 19 | 19 |
617 | 97.31 | precipitation | 0.1 | 720 | < th | dose dependent | rect. | 19 | 19 |
628 | 97.34 | atmosphere | 995.0 | 720 | > th | dose dependent | rect. | 16 | 3 |
637 | 97.40 | wind | 9.0 | 720 | < th | dose independent | rect. | 22 | 15 |
638 | 97.40 | temperature | 30.0 | 10 | < th | dose dependent | sin | 7 | NA |
641 | 97.41 | atmosphere | 1015.0 | 270 | < th | dose independent | rect. | 18 | 13 |
653 | 97.43 | humidity | 50.0 | 720 | > th | dose independent | rect. | 19 | 19 |
674 | 97.56 | precipitation | 0.1 | 720 | < th | dose independent | rect. | 4 | 3 |
676 | 97.56 | precipitation | 0.1 | 720 | < th | dose dependent | rect. | 4 | 3 |
682 | 97.58 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 14 | 13 |
686 | 97.58 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 14 | 13 |
687 | 97.59 | precipitation | 0.1 | 720 | < th | dose independent | rect. | 23 | 11 |
688 | 97.59 | precipitation | 0.1 | 720 | < th | dose dependent | rect. | 23 | 11 |
711 | 97.65 | wind | 9.0 | 270 | < th | dose independent | rect. | 3 | 11 |
712 | 97.65 | temperature | 25.0 | 30 | < th | dose independent | rect. | 23 | 22 |
714 | 97.66 | temperature | 20.0 | 720 | > th | dose independent | rect. | 10 | 13 |
715 | 97.66 | radiation | 40.0 | 270 | < th | dose independent | rect. | 14 | 13 |
720 | 97.68 | wind | 9.0 | 720 | < th | dose independent | rect. | 16 | 10 |
730 | 97.70 | temperature | 20.0 | 720 | > th | dose independent | rect. | 4 | 1 |
733 | 97.70 | temperature | 30.0 | 720 | < th | dose dependent | rect. | 18 | 10 |
747 | 97.74 | atmosphere | 1010.0 | 90 | < th | dose independent | rect. | 20 | 13 |
756 | 97.77 | humidity | 70.0 | 90 | > th | dose independent | rect. | 20 | 13 |
762 | 97.78 | precipitation | 0.1 | 720 | < th | dose independent | rect. | 19 | 21 |
765 | 97.78 | precipitation | 0.1 | 720 | < th | dose dependent | rect. | 19 | 21 |
785 | 97.83 | atmosphere | 995.0 | 720 | > th | dose independent | rect. | 16 | 3 |
788 | 97.83 | wind | 1.0 | 270 | > th | dose independent | rect. | 14 | 13 |
793 | 97.86 | temperature | 25.0 | 10 | > th | dose independent | sin | 6 | NA |
811 | 97.91 | humidity | 80.0 | 720 | > th | dose independent | rect. | 4 | 1 |
818 | 97.92 | atmosphere | 995.0 | 90 | > th | dose dependent | rect. | 16 | 12 |
826 | 97.96 | precipitation | 0.1 | 720 | < th | dose independent | rect. | 10 | 13 |
828 | 97.96 | radiation | 10.0 | 720 | < th | dose dependent | rect. | 4 | 1 |
829 | 97.96 | precipitation | 0.1 | 720 | < th | dose dependent | rect. | 10 | 13 |
845 | 98.02 | wind | 1.0 | 720 | > th | dose independent | rect. | 16 | 1 |
850 | 98.03 | radiation | 1.0 | 90 | < th | dose dependent | rect. | 23 | 20 |
875 | 98.13 | wind | 9.0 | 90 | < th | dose independent | rect. | 9 | 11 |
883 | 98.16 | atmosphere | 1015.0 | 90 | < th | dose dependent | rect. | 4 | 20 |
886 | 98.17 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 14 | 13 |
890 | 98.18 | wind | 9.0 | 720 | < th | dose independent | rect. | 10 | 6 |
893 | 98.19 | precipitation | 0.1 | 720 | < th | dose independent | rect. | 11 | 11 |
894 | 98.19 | wind | 9.0 | 720 | < th | dose independent | rect. | 7 | 19 |
895 | 98.19 | precipitation | 0.1 | 720 | < th | dose dependent | rect. | 11 | 11 |
902 | 98.20 | radiation | 1.0 | 270 | < th | dose dependent | rect. | 3 | 20 |
905 | 98.21 | precipitation | 0.1 | 720 | < th | dose independent | rect. | 22 | 13 |
909 | 98.21 | precipitation | 0.1 | 720 | < th | dose dependent | rect. | 22 | 13 |
916 | 98.23 | atmosphere | 1015.0 | 720 | < th | dose independent | rect. | 10 | 13 |
919 | 98.23 | temperature | 20.0 | 10 | > th | dose dependent | sin | 7 | NA |
920 | 98.23 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 2 | 21 |
922 | 98.24 | temperature | 25.0 | 90 | < th | dose independent | rect. | 23 | 6 |
946 | 98.28 | humidity | 50.0 | 720 | > th | dose independent | rect. | 22 | 13 |
976 | 98.35 | temperature | 25.0 | 30 | > th | dose independent | rect. | 19 | 21 |
995 | 98.41 | atmosphere | 1015.0 | 720 | < th | dose independent | rect. | 10 | 21 |
999 | 98.41 | atmosphere | 1015.0 | 10 | < th | dose dependent | rect. | 5 | 20 |