Os11g0594700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF538 family protein.
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Os11g0594700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein of unknown function DUF538 family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 488.42 | 1.04 | 4.44 | -2.17 | 1.59 | 2.38 | -0.913 | -3.34 | -1 | 14 | 16.11 | 357 | -- | -- |
| 495.45 | 1.04 | 4.37 | -1.59 | 1.54 | 2.48 | -1.33 | -- | -0.842 | 14.1 | 9.988 | 314 | -- | -- |
| 491.03 | 1.03 | 4.45 | -2.23 | 1.54 | 2.25 | -- | -3.74 | -1.01 | 14.2 | 16.9 | 315 | -- | -- |
| 502.1 | 1.04 | 4.37 | -1.62 | 1.55 | 2.43 | -- | -- | -0.841 | 14.1 | 9.918 | 314 | -- | -- |
| 577.35 | 1.12 | 4.51 | -2.56 | -- | 3.46 | -- | -3.97 | -1.23 | -- | 18 | 133 | -- | -- |
| 561.22 | 1.11 | 4.3 | -1.07 | 2.1 | -- | -1.02 | -- | -0.487 | 15 | -- | -- | -- | -- |
| 564.67 | 1.11 | 4.31 | -1.1 | 2.1 | -- | -- | -- | -0.493 | 15 | -- | -- | -- | -- |
| 593.43 | 1.13 | 4.43 | -1.92 | -- | 3.49 | -- | -- | -1.05 | -- | 16.96 | 139 | -- | -- |
| 564.03 | 1.11 | 4.32 | -- | 1.74 | 1.65 | -- | -- | -0.568 | 14.5 | 12.22 | 308 | -- | -- |
| 817.52 | 1.34 | 4.31 | -1.19 | -- | -- | -- | -- | -0.548 | -- | -- | -- | -- | -- |
| 596.32 | 1.14 | 4.28 | -- | 2.12 | -- | -- | -- | -0.371 | 15 | -- | -- | -- | -- |
| 673.38 | 1.21 | 4.33 | -- | -- | 2.57 | -- | -- | -0.617 | -- | 24.3 | 149 | -- | -- |
| 854.59 | 1.36 | 4.28 | -- | -- | -- | -- | -- | -0.416 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 478.36 | temperature | 15 | 270 | > th | dose dependent | rect. | 20 | 22 |
| 4 | 480.60 | temperature | 10 | 720 | > th | dose dependent | rect. | 20 | 18 |
| 13 | 482.21 | temperature | 15 | 270 | > th | dose dependent | rect. | 2 | 14 |
| 18 | 483.26 | temperature | 15 | 270 | > th | dose dependent | rect. | 9 | 22 |
| 39 | 485.38 | temperature | 15 | 270 | > th | dose dependent | sin | 0 | NA |
| 43 | 485.55 | temperature | 10 | 720 | > th | dose dependent | rect. | 19 | 14 |
| 76 | 487.38 | temperature | 20 | 1440 | < th | dose independent | rect. | 3 | 6 |
| 91 | 488.12 | temperature | 20 | 1440 | > th | dose independent | rect. | 3 | 6 |
| 107 | 488.93 | temperature | 15 | 720 | > th | dose dependent | sin | 8 | NA |
| 113 | 488.98 | temperature | 30 | 1440 | < th | dose dependent | rect. | 5 | 1 |
| 114 | 488.99 | atmosphere | 1010 | 90 | < th | dose dependent | rect. | 11 | 8 |
| 118 | 489.03 | temperature | 15 | 270 | > th | dose dependent | rect. | 2 | 23 |
| 126 | 489.23 | temperature | 15 | 1440 | > th | dose dependent | rect. | 5 | 1 |
| 149 | 489.90 | temperature | 15 | 270 | > th | dose dependent | no | NA | NA |
| 202 | 490.78 | temperature | 20 | 270 | > th | dose dependent | rect. | 9 | 8 |
| 238 | 491.64 | temperature | 20 | 720 | > th | dose independent | rect. | 6 | 1 |
| 266 | 492.15 | temperature | 20 | 1440 | < th | dose independent | rect. | 20 | 14 |
| 276 | 492.28 | temperature | 20 | 1440 | > th | dose independent | rect. | 20 | 14 |
| 313 | 492.69 | temperature | 20 | 1440 | < th | dose independent | sin | 7 | NA |
| 348 | 492.91 | temperature | 20 | 1440 | > th | dose independent | sin | 7 | NA |
| 351 | 492.98 | temperature | 15 | 270 | > th | dose dependent | rect. | 24 | 23 |
| 472 | 493.97 | temperature | 20 | 4320 | > th | dose independent | rect. | 8 | 1 |
| 555 | 494.62 | temperature | 30 | 720 | < th | dose dependent | rect. | 23 | 16 |
| 564 | 494.67 | temperature | 15 | 270 | > th | dose dependent | rect. | 5 | 23 |
| 625 | 495.06 | temperature | 25 | 1440 | < th | dose dependent | sin | 8 | NA |
| 895 | 496.65 | temperature | 30 | 270 | < th | dose dependent | rect. | 7 | 14 |
| 963 | 496.93 | atmosphere | 1015 | 43200 | > th | dose independent | rect. | 19 | 2 |
| 975 | 497.00 | temperature | 30 | 270 | < th | dose dependent | sin | 0 | NA |