Os07g0120500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF538 family protein.
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Os07g0120500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein of unknown function DUF538 family protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = wind,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 221.83 | 0.7 | 10.4 | -0.645 | 0.593 | 3.62 | 0.664 | 5.53 | 0.596 | 5.43 | 5.9 | 2335 | -- | -- |
| 232.8 | 0.711 | 10.3 | -0.568 | 0.678 | 3.1 | 0.946 | -- | 0.739 | 4.96 | 5.9 | 2128 | -- | -- |
| 222.9 | 0.695 | 10.4 | -0.642 | 0.593 | 3.62 | -- | 5.58 | 0.595 | 5.35 | 5.889 | 2342 | -- | -- |
| 231.18 | 0.708 | 10.3 | -0.77 | 0.66 | 2.91 | -- | -- | 0.674 | 5.36 | 5.889 | 2030 | -- | -- |
| 240.04 | 0.722 | 10.4 | -0.596 | -- | 3.62 | -- | 5.93 | 0.621 | -- | 5.831 | 2491 | -- | -- |
| 315.83 | 0.833 | 10.4 | -1.46 | 0.658 | -- | 0.272 | -- | 0.492 | 3.87 | -- | -- | -- | -- |
| 316.03 | 0.832 | 10.4 | -1.46 | 0.658 | -- | -- | -- | 0.49 | 3.79 | -- | -- | -- | -- |
| 250.04 | 0.736 | 10.3 | -0.77 | -- | 2.64 | -- | -- | 0.674 | -- | 5.871 | 2376 | -- | -- |
| 246.49 | 0.731 | 10.3 | -- | 0.678 | 3.21 | -- | -- | 0.739 | 5.41 | 5.9 | 2026 | -- | -- |
| 339.93 | 0.862 | 10.4 | -1.43 | -- | -- | -- | -- | 0.508 | -- | -- | -- | -- | -- |
| 372.12 | 0.902 | 10.3 | -- | 0.63 | -- | -- | -- | 0.653 | 3.82 | -- | -- | -- | -- |
| 263.38 | 0.756 | 10.3 | -- | -- | 2.98 | -- | -- | 0.771 | -- | 5.8 | 2464 | -- | -- |
| 393.98 | 0.926 | 10.3 | -- | -- | -- | -- | -- | 0.667 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 224.24 | wind | 7.0 | 4320 | > th | dose independent | rect. | 8 | 1 |
| 2 | 226.74 | wind | 5.0 | 4320 | > th | dose dependent | rect. | 21 | 2 |
| 3 | 226.92 | wind | 7.0 | 1440 | > th | dose independent | rect. | 2 | 8 |
| 4 | 226.97 | wind | 7.0 | 1440 | < th | dose independent | rect. | 2 | 8 |
| 12 | 228.47 | wind | 7.0 | 4320 | < th | dose independent | rect. | 8 | 1 |
| 15 | 229.02 | wind | 7.0 | 4320 | > th | dose dependent | rect. | 8 | 1 |
| 21 | 230.61 | wind | 5.0 | 4320 | > th | dose dependent | rect. | 18 | 10 |
| 28 | 231.17 | wind | 7.0 | 4320 | < th | dose independent | rect. | 18 | 10 |
| 31 | 231.87 | wind | 7.0 | 4320 | > th | dose independent | rect. | 18 | 10 |
| 38 | 232.54 | wind | 7.0 | 1440 | > th | dose dependent | rect. | 3 | 6 |
| 43 | 233.14 | wind | 5.0 | 4320 | > th | dose dependent | rect. | 18 | 15 |
| 46 | 233.28 | wind | 7.0 | 1440 | > th | dose independent | rect. | 23 | 11 |
| 60 | 233.98 | wind | 7.0 | 4320 | < th | dose independent | rect. | 18 | 16 |
| 67 | 234.12 | wind | 7.0 | 4320 | > th | dose independent | rect. | 18 | 16 |
| 68 | 234.17 | wind | 5.0 | 4320 | > th | dose dependent | sin | 11 | NA |
| 73 | 234.29 | wind | 7.0 | 1440 | < th | dose independent | rect. | 22 | 12 |
| 85 | 234.75 | wind | 7.0 | 4320 | < th | dose independent | rect. | 18 | 5 |
| 87 | 234.77 | wind | 7.0 | 4320 | < th | dose independent | rect. | 19 | 2 |
| 88 | 234.85 | wind | 7.0 | 4320 | < th | dose independent | rect. | 21 | 3 |
| 92 | 234.92 | wind | 7.0 | 4320 | > th | dose independent | rect. | 18 | 5 |
| 101 | 235.13 | wind | 7.0 | 4320 | > th | dose dependent | rect. | 18 | 5 |
| 105 | 235.26 | wind | 5.0 | 4320 | > th | dose independent | rect. | 21 | 2 |
| 140 | 236.22 | wind | 7.0 | 4320 | > th | dose independent | rect. | 19 | 2 |
| 155 | 236.62 | wind | 7.0 | 4320 | < th | dose independent | sin | 11 | NA |
| 174 | 237.17 | wind | 7.0 | 4320 | > th | dose independent | sin | 11 | NA |
| 194 | 237.49 | wind | 9.0 | 4320 | > th | dose dependent | rect. | 16 | 14 |
| 214 | 237.86 | wind | 9.0 | 4320 | > th | dose dependent | rect. | 16 | 7 |
| 383 | 240.36 | wind | 1.0 | 4320 | > th | dose dependent | rect. | 24 | 1 |
| 394 | 240.52 | wind | 7.0 | 1440 | > th | dose dependent | rect. | 23 | 11 |
| 398 | 240.58 | wind | 5.0 | 1440 | > th | dose dependent | sin | 8 | NA |
| 446 | 241.09 | wind | 5.0 | 1440 | > th | dose independent | rect. | 20 | 17 |
| 603 | 242.85 | wind | 9.0 | 4320 | < th | dose dependent | rect. | 24 | 1 |
| 651 | 243.34 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 21 | 1 |
| 688 | 243.82 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 21 | 1 |
| 719 | 244.17 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 21 | 1 |
| 720 | 244.17 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 21 | 1 |
| 743 | 244.50 | wind | 9.0 | 4320 | > th | dose dependent | rect. | 16 | 21 |
| 759 | 244.70 | temperature | 20.0 | 14400 | < th | dose dependent | rect. | 15 | 2 |
| 803 | 245.20 | temperature | 15.0 | 14400 | > th | dose independent | rect. | 4 | 1 |
| 824 | 245.38 | temperature | 15.0 | 14400 | > th | dose independent | rect. | 4 | 4 |
| 859 | 245.83 | wind | 9.0 | 4320 | > th | dose dependent | rect. | 16 | 2 |
| 872 | 245.96 | temperature | 15.0 | 14400 | < th | dose independent | rect. | 4 | 1 |
| 914 | 246.36 | wind | 5.0 | 1440 | > th | dose independent | rect. | 12 | 22 |
| 917 | 246.40 | temperature | 20.0 | 720 | > th | dose dependent | rect. | 16 | 20 |
| 918 | 246.41 | wind | 5.0 | 4320 | < th | dose independent | rect. | 24 | 1 |
| 964 | 246.84 | temperature | 20.0 | 720 | > th | dose dependent | sin | 14 | NA |
| 994 | 247.03 | temperature | 20.0 | 14400 | < th | dose independent | rect. | 15 | 1 |