BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os12g0163700 Os12g0163700|AK063572
(363 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os12g0163700 Similar to Actin 7 (Actin 2) 744 0.0
Os05g0106600 Similar to Actin 97 716 0.0
Os11g0163100 Similar to Actin 7 (Actin 2) 713 0.0
Os10g0510000 actin [Oryza sativa (japonica cultivar-group)] 708 0.0
Os03g0836000 Similar to Actin 7 (Actin 2) 707 0.0
Os03g0718100 Actin 1 704 0.0
Os05g0438800 Similar to Actin 1 676 0.0
AK059967 668 0.0
Os12g0641000 Similar to Actin 1 425 e-119
Os01g0964400 Similar to Actin 7 (Actin 2) 274 7e-74
Os08g0369300 Similar to ARP2 (Actin-related protein 2) 256 1e-68
Os08g0137200 Actin/actin-like family protein 242 3e-64
Os01g0866100 Similar to Actin 4 241 5e-64
Os02g0596900 Actin/actin-like family protein 210 2e-54
Os01g0269900 Actin/actin-like family protein 182 2e-46
AK110272 119 3e-27
Os08g0128300 Similar to Actin-like protein 3 (Actin-related... 97 2e-20
D21122 87 2e-17
Os03g0783000 Similar to Actin-related protein 7 69 5e-12
>Os12g0163700 Similar to Actin 7 (Actin 2)
Length = 363
Score = 744 bits (1920), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 358/363 (98%), Positives = 358/363 (98%)
Query: 1 MADGEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 60
MADGEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA
Sbjct: 1 MADGEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 60
Query: 61 QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEKMTQIMFESFNVPAMYVA 120
QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEKMTQIMFESFNVPAMYVA
Sbjct: 61 QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEKMTQIMFESFNVPAMYVA 120
Query: 121 IQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTE 180
IQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTE
Sbjct: 121 IQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTE 180
Query: 181 RGYSFTTTAEREIVRDIKEKLAYVALDYEQELNXXXXXKNSSSVEKSYELPDGQVITIGA 240
RGYSFTTTAEREIVRDIKEKLAYVALDYEQELN KNSSSVEKSYELPDGQVITIGA
Sbjct: 181 RGYSFTTTAEREIVRDIKEKLAYVALDYEQELNAAAAAKNSSSVEKSYELPDGQVITIGA 240
Query: 241 ERFRCPEVLFQPSLVGMEAAGIHETTYNSIMKCDVDIRKDLYGNVVLSGGSTMFPGIADR 300
ERFRCPEVLFQPSLVGMEAAGIHETTYNSIMKCDVDIRKDLYGNVVLSGGSTMFPGIADR
Sbjct: 241 ERFRCPEVLFQPSLVGMEAAGIHETTYNSIMKCDVDIRKDLYGNVVLSGGSTMFPGIADR 300
Query: 301 MSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKAEYDESGPAIVHR 360
MSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKAEYDESGPAIVHR
Sbjct: 301 MSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKAEYDESGPAIVHR 360
Query: 361 KCF 363
KCF
Sbjct: 361 KCF 363
>Os05g0106600 Similar to Actin 97
Length = 377
Score = 716 bits (1847), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 349/380 (91%), Positives = 356/380 (93%), Gaps = 20/380 (5%)
Query: 1 MADGEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 60
MADGEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA
Sbjct: 1 MADGEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 60
Query: 61 QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEE-----------------K 103
QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEE K
Sbjct: 61 QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 120
Query: 104 MTQIMFESFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRL 163
MTQIMFE+FNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRL
Sbjct: 121 MTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRL 180
Query: 164 DLAGRDLTDALMKILTERGYSFTTTAEREIVRDIKEKLAYVALDYEQELNXXXXXKNSSS 223
DLAGRDLTD+LMKILTERGYSFTT+AEREIVRDIKEKLAYVALDYEQEL KNSSS
Sbjct: 181 DLAGRDLTDSLMKILTERGYSFTTSAEREIVRDIKEKLAYVALDYEQELETA---KNSSS 237
Query: 224 VEKSYELPDGQVITIGAERFRCPEVLFQPSLVGMEAAGIHETTYNSIMKCDVDIRKDLYG 283
VEKSYELPDGQVITIGAERFRCPEVLFQPS++GMEAAGIHETTYNSIMKCDVDIRKDLYG
Sbjct: 238 VEKSYELPDGQVITIGAERFRCPEVLFQPSMIGMEAAGIHETTYNSIMKCDVDIRKDLYG 297
Query: 284 NVVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQM 343
N+VLSGG+TMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQM
Sbjct: 298 NIVLSGGTTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQM 357
Query: 344 WISKAEYDESGPAIVHRKCF 363
WISK EYDESGPAIVHRKCF
Sbjct: 358 WISKDEYDESGPAIVHRKCF 377
>Os11g0163100 Similar to Actin 7 (Actin 2)
Length = 377
Score = 713 bits (1841), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 349/380 (91%), Positives = 354/380 (93%), Gaps = 20/380 (5%)
Query: 1 MADGEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 60
MADGEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA
Sbjct: 1 MADGEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 60
Query: 61 QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEE-----------------K 103
QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEE K
Sbjct: 61 QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 120
Query: 104 MTQIMFESFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRL 163
MTQIMFE+FNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRL
Sbjct: 121 MTQIMFETFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRL 180
Query: 164 DLAGRDLTDALMKILTERGYSFTTTAEREIVRDIKEKLAYVALDYEQELNXXXXXKNSSS 223
DLAGRDLTD+LMKILTERGYSFTTTAEREIVRDIKEKLAYVALDYEQEL K+SSS
Sbjct: 181 DLAGRDLTDSLMKILTERGYSFTTTAEREIVRDIKEKLAYVALDYEQELEAA---KSSSS 237
Query: 224 VEKSYELPDGQVITIGAERFRCPEVLFQPSLVGMEAAGIHETTYNSIMKCDVDIRKDLYG 283
VEKSYELPDGQVITIGAERFRCPEVLFQPS +GMEA GIHETTYNSIMKCDVDIRKDLYG
Sbjct: 238 VEKSYELPDGQVITIGAERFRCPEVLFQPSFIGMEAPGIHETTYNSIMKCDVDIRKDLYG 297
Query: 284 NVVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQM 343
N+VLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQM
Sbjct: 298 NIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQM 357
Query: 344 WISKAEYDESGPAIVHRKCF 363
WISK EYDESGPAIVHRKCF
Sbjct: 358 WISKGEYDESGPAIVHRKCF 377
>Os10g0510000 actin [Oryza sativa (japonica cultivar-group)]
Length = 377
Score = 708 bits (1827), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 345/380 (90%), Positives = 355/380 (93%), Gaps = 20/380 (5%)
Query: 1 MADGEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 60
MAD EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA
Sbjct: 1 MADAEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 60
Query: 61 QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEE-----------------K 103
QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEE K
Sbjct: 61 QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANREK 120
Query: 104 MTQIMFESFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRL 163
MTQIMFE+F+VPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRL
Sbjct: 121 MTQIMFETFSVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRL 180
Query: 164 DLAGRDLTDALMKILTERGYSFTTTAEREIVRDIKEKLAYVALDYEQELNXXXXXKNSSS 223
DLAGRDLTD+LMKILTERGYSFTT+AEREIVRDIKEKLAYVALDYEQEL K+SSS
Sbjct: 181 DLAGRDLTDSLMKILTERGYSFTTSAEREIVRDIKEKLAYVALDYEQELETA---KSSSS 237
Query: 224 VEKSYELPDGQVITIGAERFRCPEVLFQPSLVGMEAAGIHETTYNSIMKCDVDIRKDLYG 283
VEKSYELPDGQVITIGAERFRCPEV+FQPSL+GMEA GIHETTYNSIMKCDVDIRKDLYG
Sbjct: 238 VEKSYELPDGQVITIGAERFRCPEVMFQPSLIGMEAPGIHETTYNSIMKCDVDIRKDLYG 297
Query: 284 NVVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQM 343
N+VLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQM
Sbjct: 298 NIVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQM 357
Query: 344 WISKAEYDESGPAIVHRKCF 363
WIS+AEY+ESGPAIVHRKCF
Sbjct: 358 WISRAEYEESGPAIVHRKCF 377
>Os03g0836000 Similar to Actin 7 (Actin 2)
Length = 377
Score = 707 bits (1825), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 344/380 (90%), Positives = 353/380 (92%), Gaps = 20/380 (5%)
Query: 1 MADGEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 60
MADGEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA
Sbjct: 1 MADGEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 60
Query: 61 QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEE-----------------K 103
QSKRGILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEE K
Sbjct: 61 QSKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANREK 120
Query: 104 MTQIMFESFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRL 163
MTQIMFE+FN PAMYVAIQAVLSLYASGRTTGIVLDSGDGV+HTVPIYEGYALPHAILRL
Sbjct: 121 MTQIMFETFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRL 180
Query: 164 DLAGRDLTDALMKILTERGYSFTTTAEREIVRDIKEKLAYVALDYEQELNXXXXXKNSSS 223
DLAGRDLTD LMKILTERGYSFTTTAEREIVRDIKEKLAY+ALDYEQEL K+SSS
Sbjct: 181 DLAGRDLTDCLMKILTERGYSFTTTAEREIVRDIKEKLAYIALDYEQELETA---KSSSS 237
Query: 224 VEKSYELPDGQVITIGAERFRCPEVLFQPSLVGMEAAGIHETTYNSIMKCDVDIRKDLYG 283
VEKSYELPDGQVITIGAERFRCPEVLFQPSL+GMEA GIHETTYNSIMKCDVDIRKDLYG
Sbjct: 238 VEKSYELPDGQVITIGAERFRCPEVLFQPSLIGMEAPGIHETTYNSIMKCDVDIRKDLYG 297
Query: 284 NVVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQM 343
N+VLSGG+TMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQM
Sbjct: 298 NIVLSGGTTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQM 357
Query: 344 WISKAEYDESGPAIVHRKCF 363
WISK EYDESGP+IVHRKCF
Sbjct: 358 WISKGEYDESGPSIVHRKCF 377
>Os03g0718100 Actin 1
Length = 377
Score = 704 bits (1818), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 341/380 (89%), Positives = 352/380 (92%), Gaps = 20/380 (5%)
Query: 1 MADGEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 60
MAD EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA
Sbjct: 1 MADAEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 60
Query: 61 QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEE-----------------K 103
QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEE K
Sbjct: 61 QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 120
Query: 104 MTQIMFESFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRL 163
MTQIMFE+FN PAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRL
Sbjct: 121 MTQIMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRL 180
Query: 164 DLAGRDLTDALMKILTERGYSFTTTAEREIVRDIKEKLAYVALDYEQELNXXXXXKNSSS 223
DLAGRDLTD LMKILTERGYSFTTTAEREIVRD+KEKL+Y+ALDY+QE+ K SSS
Sbjct: 181 DLAGRDLTDYLMKILTERGYSFTTTAEREIVRDMKEKLSYIALDYDQEMETA---KTSSS 237
Query: 224 VEKSYELPDGQVITIGAERFRCPEVLFQPSLVGMEAAGIHETTYNSIMKCDVDIRKDLYG 283
VEKSYELPDGQVITIGAERFRCPEVLFQPS +GMEAAGIHETTYNSIMKCDVDIRKDLYG
Sbjct: 238 VEKSYELPDGQVITIGAERFRCPEVLFQPSFIGMEAAGIHETTYNSIMKCDVDIRKDLYG 297
Query: 284 NVVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQM 343
N+VLSGG+TMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQM
Sbjct: 298 NIVLSGGTTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQM 357
Query: 344 WISKAEYDESGPAIVHRKCF 363
WI+KAEYDESGP+IVHRKCF
Sbjct: 358 WIAKAEYDESGPSIVHRKCF 377
>Os05g0438800 Similar to Actin 1
Length = 376
Score = 676 bits (1743), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 334/380 (87%), Positives = 347/380 (91%), Gaps = 21/380 (5%)
Query: 1 MADGEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 60
MAD EDIQP+VCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA
Sbjct: 1 MAD-EDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 59
Query: 61 QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPE-----------------EK 103
Q+KRGILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPE EK
Sbjct: 60 QAKRGILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEDHPVLLTEAPLNPKANREK 119
Query: 104 MTQIMFESFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRL 163
MTQIMFE+FN PAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGY LPHAILRL
Sbjct: 120 MTQIMFETFNCPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYTLPHAILRL 179
Query: 164 DLAGRDLTDALMKILTERGYSFTTTAEREIVRDIKEKLAYVALDYEQELNXXXXXKNSSS 223
DLAGRDLTD LMKILTERGYS TT+AEREIVRDIKEKLAYVALDYEQEL ++SSS
Sbjct: 180 DLAGRDLTDHLMKILTERGYSLTTSAEREIVRDIKEKLAYVALDYEQELETS---RSSSS 236
Query: 224 VEKSYELPDGQVITIGAERFRCPEVLFQPSLVGMEAAGIHETTYNSIMKCDVDIRKDLYG 283
VEKSYE+PDGQVITIG+ERFRCPEVLFQPSLVGME+ GIHE TYNSIMKCDVDIRKDLYG
Sbjct: 237 VEKSYEMPDGQVITIGSERFRCPEVLFQPSLVGMESPGIHEATYNSIMKCDVDIRKDLYG 296
Query: 284 NVVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQM 343
NVVLSGGSTMFPGIADRMSKEIT+LAPSSMK+KV+APPERKYSVWIGGSILASLSTFQQM
Sbjct: 297 NVVLSGGSTMFPGIADRMSKEITSLAPSSMKVKVIAPPERKYSVWIGGSILASLSTFQQM 356
Query: 344 WISKAEYDESGPAIVHRKCF 363
WISK EYDESGP IVH KCF
Sbjct: 357 WISKGEYDESGPGIVHMKCF 376
>AK059967
Length = 375
Score = 668 bits (1723), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 321/377 (85%), Positives = 342/377 (90%), Gaps = 20/377 (5%)
Query: 4 GEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSK 63
G+++Q LV DNGTGM KAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKD+YVGDEAQSK
Sbjct: 2 GDEVQALVIDNGTGMCKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDSYVGDEAQSK 61
Query: 64 RGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEE-----------------KMTQ 106
RGILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEE KMTQ
Sbjct: 62 RGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQ 121
Query: 107 IMFESFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLA 166
IMFE+FN PAMYVAIQAVLSLYASGRTTGIVLDSGDGV+HTVPIYEGYALPHAILRLDLA
Sbjct: 122 IMFETFNTPAMYVAIQAVLSLYASGRTTGIVLDSGDGVTHTVPIYEGYALPHAILRLDLA 181
Query: 167 GRDLTDALMKILTERGYSFTTTAEREIVRDIKEKLAYVALDYEQELNXXXXXKNSSSVEK 226
GRDLTD LMKILTERGYSFTTTAEREIVRDIKEKL YVALD+EQE++ +SS++EK
Sbjct: 182 GRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMHTAA---SSSALEK 238
Query: 227 SYELPDGQVITIGAERFRCPEVLFQPSLVGMEAAGIHETTYNSIMKCDVDIRKDLYGNVV 286
SYELPDGQVITIG ERFR PE LFQPS +GME+AGIHETTYNSIMKCDVDIRKDLYGNVV
Sbjct: 239 SYELPDGQVITIGNERFRAPEALFQPSFLGMESAGIHETTYNSIMKCDVDIRKDLYGNVV 298
Query: 287 LSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWIS 346
LSGG+TMFPGIADRM KE+TALAPS+MKIK++APPERKYSVWIGGSILASLSTFQQMWIS
Sbjct: 299 LSGGTTMFPGIADRMQKELTALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWIS 358
Query: 347 KAEYDESGPAIVHRKCF 363
K EYDESGP+IVHRKCF
Sbjct: 359 KEEYDESGPSIVHRKCF 375
>Os12g0641000 Similar to Actin 1
Length = 243
Score = 425 bits (1093), Expect = e-119, Method: Compositional matrix adjust.
Identities = 207/246 (84%), Positives = 217/246 (88%), Gaps = 20/246 (8%)
Query: 68 TLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEE-----------------KMTQIMFE 110
TLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPEE KMTQIMFE
Sbjct: 1 TLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMTQIMFE 60
Query: 111 SFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDL 170
+FN PAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDL
Sbjct: 61 TFNAPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDL 120
Query: 171 TDALMKILTERGYSFTTTAEREIVRDIKEKLAYVALDYEQELNXXXXXKNSSSVEKSYEL 230
TD LMKILTERGYSFTTTAEREIVRD+KEKL+Y+ALD++QE+ SSVEKSYEL
Sbjct: 121 TDYLMKILTERGYSFTTTAEREIVRDVKEKLSYIALDFDQEM---ATAATGSSVEKSYEL 177
Query: 231 PDGQVITIGAERFRCPEVLFQPSLVGMEAAGIHETTYNSIMKCDVDIRKDLYGNVVLSGG 290
PDGQVITIGAERFRCPEVLFQPS VGMEAAGIHETTYNSIMKCDVDIRKDLYGN+VLSGG
Sbjct: 178 PDGQVITIGAERFRCPEVLFQPSFVGMEAAGIHETTYNSIMKCDVDIRKDLYGNIVLSGG 237
Query: 291 STMFPG 296
+TMFPG
Sbjct: 238 TTMFPG 243
>Os01g0964400 Similar to Actin 7 (Actin 2)
Length = 222
Score = 274 bits (701), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 133/151 (88%), Positives = 134/151 (88%), Gaps = 17/151 (11%)
Query: 1 MADGEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 60
MADGEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA
Sbjct: 1 MADGEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEA 60
Query: 61 QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPE-----------------EK 103
QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPE EK
Sbjct: 61 QSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREK 120
Query: 104 MTQIMFESFNVPAMYVAIQAVLSLYASGRTT 134
MTQIMFE+FNVPAMYVAIQAVLSLYASGRTT
Sbjct: 121 MTQIMFETFNVPAMYVAIQAVLSLYASGRTT 151
Score = 153 bits (386), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 73/76 (96%), Positives = 74/76 (97%)
Query: 288 SGGSTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISK 347
SG +TMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISK
Sbjct: 147 SGRTTMFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISK 206
Query: 348 AEYDESGPAIVHRKCF 363
EYDESGPAIVHRKCF
Sbjct: 207 DEYDESGPAIVHRKCF 222
>Os08g0369300 Similar to ARP2 (Actin-related protein 2)
Length = 441
Score = 256 bits (655), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 140/373 (37%), Positives = 207/373 (55%), Gaps = 57/373 (15%)
Query: 10 LVCDNGTGMVKAGFAGDDAPRAVFPSIVGRP--RHTGVMVGMGQKDAYVGDEAQSKRGIL 67
+VCDNGTG VK GFAG++ P +VFP +VGRP R+ + D VG R L
Sbjct: 7 VVCDNGTGYVKCGFAGENFPTSVFPCVVGRPLLRYEESLQEQELTDIVVGAACADLRHQL 66
Query: 68 TLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAP-----------------EEKMTQIMFE 110
+ YP+ +GIV +WDDM IW H FY+EL+V P EKM + MFE
Sbjct: 67 DVSYPVTNGIVQSWDDMGHIWDHAFYSELKVDPSECKILLTDPPLNPVKNREKMIETMFE 126
Query: 111 SFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPHAILRLDLAGRDL 170
+N +++ +QAVLSLYA G TG+V+DSGDGV+H VP+ +G++ PH R+++AGR +
Sbjct: 127 KYNFAGVFIQVQAVLSLYAQGLLTGLVIDSGDGVTHVVPVVDGFSYPHITKRMNVAGRHI 186
Query: 171 TDALMKILTERG-YSFTTTAEREIVRDIKEKLAYVALDYEQELNXXXXXKNSSSVEKSYE 229
T L+ +L+ RG S +RE + DY++E ++ + KSY
Sbjct: 187 TSYLVDLLSRRGLLSHFIELKRE---------NMYSYDYKREYQLGL---ETTILVKSYT 234
Query: 230 LPDGQVITIGAERFRCPEVLFQP--------------SLVGMEAAGIHETTYNSIMKCDV 275
LPDG+VI +G ERF+ PE LF P L+ +E G+ + + I + D+
Sbjct: 235 LPDGRVIKVGTERFQAPEALFTPDQYQHNIDKTFVEQELIDVEGDGMADMAFRCIQEMDI 294
Query: 276 DIRKDLYGNVVLSGGSTMFPGIADRMSKEI-----------TALAPSSMKIKVVAPPERK 324
D R LY ++VLSGGSTM+PG+ R+ KE+ +++++ PP RK
Sbjct: 295 DNRMTLYQHIVLSGGSTMYPGLPSRLEKEMLDRYLDVVLKGNKDGLKKLRLRIEDPPRRK 354
Query: 325 YSVWIGGSILASL 337
+ V++GG++LA +
Sbjct: 355 HMVYLGGAVLAGI 367
>Os08g0137200 Actin/actin-like family protein
Length = 443
Score = 242 bits (618), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 158/451 (35%), Positives = 229/451 (50%), Gaps = 98/451 (21%)
Query: 1 MADGEDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTG---------------- 44
M G+++ +V D G+ KAG+AGDD P+AVFPS+VG TG
Sbjct: 1 MYGGDEVSAIVIDVGSYSCKAGYAGDDTPKAVFPSVVGSIEQTGETDEAKADKEAEAASD 60
Query: 45 ---------VMVGMGQKDAYVGDEAQSKRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNE 95
V ++ YVG E + +R + + P++ G V++WD ++ IW+H F
Sbjct: 61 SKNGAKPMDVDKAKTKRKLYVGQELEFRRDHMEVISPMKDGTVTDWDIVDNIWNHAFRQR 120
Query: 96 LRVAPE-----------------EKMTQIMFESFNVPAMYVAIQAVLSLYASGRTTGIVL 138
L + PE EK ++MFE + VPA+++A AVL+ +ASGR T +V+
Sbjct: 121 LLINPEEHPMLIAEPSTNTGQQREKAAELMFEKYKVPALFLAKNAVLTSFASGRATSLVV 180
Query: 139 DSGDGVSHTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERG------YSFT------ 186
DSG G + +++GY L ++ + G LTD +MK L +G YSF
Sbjct: 181 DSGGGSTVVAAVHDGYVLQKSVATSPIGGEFLTDCMMKSLESKGVVIRPRYSFKKKEVGP 240
Query: 187 -----------TTAE-------REIVRDIKEKLAYV---ALDYEQELNXXXXXKNSSSVE 225
T E R I DIKE + V A D N
Sbjct: 241 GEYKVVDLDLPNTTESYKLYCMRAIASDIKESVCRVPDTAFDEVAYANVPTT-------- 292
Query: 226 KSYELPDGQVITIGAERFRCPEVLFQPSLV-----------GMEAAGIHETTYNSIMKCD 274
SYELPDGQ I +GA+RF+ P++LF PSL M G+ +S+ +CD
Sbjct: 293 -SYELPDGQTIEVGADRFKIPDILFNPSLSQTIPGVDGFADSMSVRGLPRMVIDSVNRCD 351
Query: 275 VDIRKDLYGNVVLSGGSTMFPGIADRMSKEITALAPSSMKIKVVAPP---ERKYSVWIGG 331
VDIRK+L +++LSGGS+ + +R+ KE+ + + ++KV+A ER++SVWIGG
Sbjct: 352 VDIRKELLSSILLSGGSSSILQLKERLEKEVLEESSGNTRVKVLASGNSVERRFSVWIGG 411
Query: 332 SILASLSTFQQMWISKAEYDESGPAIVHRKC 362
SILASL +FQQMW SKAEY+E G + + RKC
Sbjct: 412 SILASLGSFQQMWFSKAEYEEHGVSYIQRKC 442
>Os01g0866100 Similar to Actin 4
Length = 203
Score = 241 bits (616), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 115/139 (82%), Positives = 119/139 (85%), Gaps = 17/139 (12%)
Query: 5 EDIQPLVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 64
EDIQP+VCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR
Sbjct: 4 EDIQPIVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR 63
Query: 65 GILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPE-----------------EKMTQI 107
GILTLKYPIEHGIV+NWDDMEKIWHHTFYNELRVAPE EKMTQI
Sbjct: 64 GILTLKYPIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPMNPKANREKMTQI 123
Query: 108 MFESFNVPAMYVAIQAVLS 126
MFE+FN PAMYVAIQ + S
Sbjct: 124 MFETFNCPAMYVAIQTMAS 142
>Os02g0596900 Actin/actin-like family protein
Length = 428
Score = 210 bits (534), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 132/413 (31%), Positives = 197/413 (47%), Gaps = 67/413 (16%)
Query: 10 LVCDNGTGMVKAGFAGDDAPRAVFPSIV-------GRPR------------HTGVMVGMG 50
+V DNGTG K GFAG+ P + P++V G+ R GVM +
Sbjct: 9 VVIDNGTGYTKMGFAGNVEPCFITPTVVAVNDTFAGQTRANTTKGNWMAQHSAGVMADL- 67
Query: 51 QKDAYVGDEAQSKR---GILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPE------ 101
D ++G++A ++ L YPI +G V NWD ME+ W +N LR PE
Sbjct: 68 --DFFIGEDALARSRSSNTYNLSYPIHNGQVENWDTMERFWQQCIFNYLRCDPEDHYFLL 125
Query: 102 -----------EKMTQIMFESFNVPAMYVAIQAVLSLYASGRTT-----GIVLDSGDGVS 145
E +IMFE+FNVP +Y+A Q VL+L A TT G+V+D GDG +
Sbjct: 126 TESPLTPPETREYTGEIMFETFNVPGLYIACQPVLALAAGYTTTKCEMTGVVVDVGDGAT 185
Query: 146 HTVPIYEGYALPHAILRLDLAGRDLTDALMKILTERGYSFTTTAEREIVRDIKEKLAYVA 205
H VP+ +GY + +I + + G+D+T + ++L ERG ++ R +KE Y
Sbjct: 186 HIVPVADGYVIGSSIRSIPITGKDVTQFIQQLLKERGEHIPPEESFDVARRVKEMYCYTC 245
Query: 206 LDYEQELNXXXXXKNSSSVEKSYELPD---GQVITIGAERFRCPEVLFQPSLVGME-AAG 261
D +E N N S P IG ERF PE+ F P + +
Sbjct: 246 SDIVKEFNKHDREPNKYIKHWSGIKPKTGAKYTCDIGYERFLGPEIFFHPEIYNNDFTTP 305
Query: 262 IHETTYNSIMKCDVDIRKDLYGNVVLSGGSTMFPGIADRMSKEITALAPSS--------- 312
+H I +D R+ LY N+VLSGGSTMF R+ +++ + +
Sbjct: 306 LHVVIDKCIQSSPIDTRRALYKNIVLSGGSTMFKDFHRRLQRDLKKIVDARVLASNARLG 365
Query: 313 -------MKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKAEYDESGPAIV 358
+++ VV+ P ++Y+VW GGS+LAS + F + +KAEY+E G +I
Sbjct: 366 GDAKAQPIEVNVVSHPIQRYAVWFGGSVLASTAEFYEACHTKAEYEEYGASIC 418
>Os01g0269900 Actin/actin-like family protein
Length = 429
Score = 182 bits (463), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 119/431 (27%), Positives = 190/431 (44%), Gaps = 87/431 (20%)
Query: 10 LVCDNGTGMVKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKR---GI 66
+V DNG G++KAGF GD P AV P+ + +P G K V D+ Q++
Sbjct: 8 VVLDNGGGLLKAGFGGDMNPTAVVPNCMAKPP--------GSKKWLVADQLQAQDVDVTG 59
Query: 67 LTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEKMTQIMFESFNVPAMYVAIQ---- 122
+TL+ PI+ G + N + ++W N L+V P ++ FN PA+ A
Sbjct: 60 MTLRRPIDRGYLINQEVQREVWERVIRNLLQVDPNNSSLLLVEPQFNPPALQHATDELVF 119
Query: 123 --------------AVLSLYASGR-------TTGIVLDSGDGVSHTVPIYEGYALPHAIL 161
+++ LY + R +V+D G +H P+ + + L +A+
Sbjct: 120 EELGFKSLCVADAPSLVHLYEASRQPSLFRAQCSLVVDCGFSFTHASPVLQNFTLNYAVR 179
Query: 162 RLDLAGRDLTDALMKILTERGYSFTTTAEREIVRDIKEKLAYVALDYEQELNXXXXXKNS 221
R+DL G+ LT+ L ++++ R S E ++ D KEKL +V+LD +L N
Sbjct: 180 RMDLGGKALTNYLKELISYR--SLNVMDETLLIDDAKEKLCFVSLDVPGDLRLARLSSND 237
Query: 222 SSVEKSYELPDG------------------------------------------------ 233
+ SY LPDG
Sbjct: 238 NPFRCSYILPDGITYKKGFVKDLDEACRYSSLPANGESVRKDSSDSDRSKFEDKKKPELS 297
Query: 234 -QVITIGAERFRCPEVLFQPSLVGMEAAGIHETTYNSIMKCDVDIRKDLYGNVVLSGGST 292
+ ERF PE+LF P +GM AG+ E +I C ++ L+ ++L+GGST
Sbjct: 298 QNEFVLTNERFLVPEMLFHPIDLGMNQAGLAECIVRAIQACHPHLQPVLFERIILTGGST 357
Query: 293 MFPGIADRMSKEITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKAEYDE 352
+FP +R+ KE+ L P ++K++A + W GGS+LA F+ M I+K+EY+E
Sbjct: 358 LFPRFTERLEKELRPLVPDDYQVKIIAQEDPILGAWRGGSLLAHRPDFESMCITKSEYEE 417
Query: 353 SGPAIVHRKCF 363
G R+ F
Sbjct: 418 MGSMRCRRRFF 428
>AK110272
Length = 98
Score = 119 bits (299), Expect = 3e-27, Method: Composition-based stats.
Identities = 53/59 (89%), Positives = 57/59 (96%)
Query: 305 ITALAPSSMKIKVVAPPERKYSVWIGGSILASLSTFQQMWISKAEYDESGPAIVHRKCF 363
ITALAPS++KIK++APPERKYSVWIGGSILASLSTFQQMWISK EYDESGP IVHRKCF
Sbjct: 40 ITALAPSTIKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQEYDESGPGIVHRKCF 98
>Os08g0128300 Similar to Actin-like protein 3 (Actin-related protein 3)
Length = 180
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 56/158 (35%), Positives = 77/158 (48%), Gaps = 41/158 (25%)
Query: 10 LVCDNGTGMVKAGFAGDDAPRAVFPSIVG------------------RPRHTGVMVGMGQ 51
+V DNGTG K GF+G+ P P++V + GVM +
Sbjct: 9 VVIDNGTGYSKLGFSGNSEPCFTIPTVVAVNESFLDQSEMCSSANWIAQYNAGVMADL-- 66
Query: 52 KDAYVGDEAQS---KRGILTLKYPIEHGIVSNWDDMEKIWHHTFYNELRVAPEEKMT--- 105
D ++GDEA S G+ T K+PI HG V +WD ME+ W +N LR PEE
Sbjct: 67 -DFFIGDEALSLFKSSGLYTRKHPINHGQVDDWDTMERFWQQCIFNYLRCNPEEHYFLLT 125
Query: 106 --------------QIMFESFNVPAMYVAIQAVLSLYA 129
+IMFE+FNVP +Y+++Q+VLSL A
Sbjct: 126 DSPVSTPESRECAGEIMFETFNVPGLYISVQSVLSLSA 163
>D21122
Length = 120
Score = 87.4 bits (215), Expect = 2e-17, Method: Composition-based stats.
Identities = 45/96 (46%), Positives = 53/96 (55%), Gaps = 18/96 (18%)
Query: 72 PIEHGIVSNWDDMEKIWHHTFYNELRVAPEE-----------------KMTQIMFESFNV 114
PIEHGIV+NWDDMEKIWHHTFYNELRVAPEE KM MFE+F
Sbjct: 1 PIEHGIVNNWDDMEKIWHHTFYNELRVAPEEHPILLTEAPLNPKANRXKMPXXMFETFKC 60
Query: 115 PAMYVAIQAV-LSLYASGRTTGIVLDSGDGVSHTVP 149
+ + +++ VL SGDG + TVP
Sbjct: 61 TSNVCGYSSCSFTIWQWSYXQVFVLXSGDGXTXTVP 96
>Os03g0783000 Similar to Actin-related protein 7
Length = 162
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 53/171 (30%), Positives = 81/171 (47%), Gaps = 34/171 (19%)
Query: 7 IQPLVCDNGTGMVKAGFA-GDDAPRAVFPSIVGRPRHTGVMVGMGQKDAYVGDEAQSKRG 65
++ +V D G+ ++KAG A D +P V PS + + +D +GD A +
Sbjct: 1 MEAVVVDAGSKLLKAGIALPDQSPSLVMPS----------KMKLEVEDGQMGDGAVVE-- 48
Query: 66 ILTLKYPIEHGIVSNWDDMEKIWHHTFYNELR------------------VAPEEKMTQI 107
+ P+ G V +WD ME + ++ Y+ + A E++ Q+
Sbjct: 49 --EVVQPVVRGFVKDWDAMEDLLNYVLYSNIGWEIGDEGQILFTEPLFTPKALREQLAQL 106
Query: 108 MFESFNVPAMYVAIQAVLSLYASGRTTGIVLDSGDGVSHTVPIYEGYALPH 158
MFE FNV Y + QAVLSLYA GR +G +D G G P+ EG A+ H
Sbjct: 107 MFEKFNVSGFYDSEQAVLSLYAVGRISGCTVDIGHGKIDIAPVCEG-AVQH 156
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.318 0.135 0.398
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 12,739,873
Number of extensions: 527735
Number of successful extensions: 1034
Number of sequences better than 1.0e-10: 19
Number of HSP's gapped: 995
Number of HSP's successfully gapped: 21
Length of query: 363
Length of database: 17,035,801
Length adjustment: 102
Effective length of query: 261
Effective length of database: 11,709,973
Effective search space: 3056302953
Effective search space used: 3056302953
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 157 (65.1 bits)