BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os12g0126300 Os12g0126300|Os12g0126300
(443 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os12g0126300 Similar to AP2-1 protein (Fragment) 704 0.0
Os09g0423800 Similar to AP2-1 protein (Fragment) 237 1e-62
Os08g0442400 Similar to BABY BOOM 224 1e-58
Os06g0145700 222 3e-58
Os01g0813300 215 5e-56
Os05g0536250 211 1e-54
Os06g0657500 Similar to ANT (Ovule development protein aint... 208 8e-54
Os04g0653600 Similar to AINTEGUMENTA-like protein 204 1e-52
Os03g0232200 Similar to BABY BOOM 202 4e-52
Os03g0313100 Similar to ANT-like protein 166 4e-41
Os07g0124700 Similar to PLETHORA1 162 5e-40
Os07g0235800 Pathogenesis-related transcriptional factor an... 122 4e-28
Os01g0899800 Pathogenesis-related transcriptional factor an... 120 3e-27
Os02g0614300 Similar to ANT-like protein 112 5e-25
Os03g0818800 Similar to Floral homeotic protein 102 6e-22
Os05g0389000 Similar to AP2-1 protein (Fragment) 88 2e-17
Os11g0129700 Similar to AP2-1 protein (Fragment) 78 1e-14
Os05g0121600 Similar to AP2 domain containing protein RAP2.... 77 2e-14
>Os12g0126300 Similar to AP2-1 protein (Fragment)
Length = 443
Score = 704 bits (1816), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 348/405 (85%), Positives = 348/405 (85%)
Query: 39 CKRRARPRTEKSTGKAKRPKKESKEVADPSSNXXXXXKRSSIYRGVTRHRWTGRFEAHLW 98
CKRRARPRTEKSTGKAKRPKKESKEVADPSSN KRSSIYRGVTRHRWTGRFEAHLW
Sbjct: 39 CKRRARPRTEKSTGKAKRPKKESKEVADPSSNGGGGGKRSSIYRGVTRHRWTGRFEAHLW 98
Query: 99 DKNCSTSLQNKKKGRQGAYDSEEXXXXXXXXXXLKYWGPETVLNFPLEEYEKERSEMEGV 158
DKNCSTSLQNKKKGRQGAYDSEE LKYWGPETVLNFPLEEYEKERSEMEGV
Sbjct: 99 DKNCSTSLQNKKKGRQGAYDSEEAAARAYDLAALKYWGPETVLNFPLEEYEKERSEMEGV 158
Query: 159 SREEYLAXXXXXXXXXXXXXXKYRGVARHHHNGRWEARIGRVLGNKYLYLGTFDTQEEAA 218
SREEYLA KYRGVARHHHNGRWEARIGRVLGNKYLYLGTFDTQEEAA
Sbjct: 159 SREEYLASLRRRSSGFSRGVSKYRGVARHHHNGRWEARIGRVLGNKYLYLGTFDTQEEAA 218
Query: 219 KAYDLAAIEYRGANAVTNFDISCYLDXXXXXXXXXXXXXXXXXXXXXXXXXXXXHEEPQD 278
KAYDLAAIEYRGANAVTNFDISCYLD HEEPQD
Sbjct: 219 KAYDLAAIEYRGANAVTNFDISCYLDQPQLLAQLQQEPQLLAQLQQEPQVVPALHEEPQD 278
Query: 279 DDRSENAVQELSSSEANTSSDNNEPLAADDSAECMNEPLPIVDGIEESLWSPCLDYELDT 338
DDRSENAVQELSSSEANTSSDNNEPLAADDSAECMNEPLPIVDGIEESLWSPCLDYELDT
Sbjct: 279 DDRSENAVQELSSSEANTSSDNNEPLAADDSAECMNEPLPIVDGIEESLWSPCLDYELDT 338
Query: 339 MPGAYFSNSMNFSEWFNDEAFEGGMEYLFEGCSSITEGGNSMDNSGMAEYNLFEECNMLE 398
MPGAYFSNSMNFSEWFNDEAFEGGMEYLFEGCSSITEGGNSMDNSGMAEYNLFEECNMLE
Sbjct: 339 MPGAYFSNSMNFSEWFNDEAFEGGMEYLFEGCSSITEGGNSMDNSGMAEYNLFEECNMLE 398
Query: 399 KDISDFLDKDISDFLDKDISISDRERISPQANNISCPQKMISVCN 443
KDISDFLDKDISDFLDKDISISDRERISPQANNISCPQKMISVCN
Sbjct: 399 KDISDFLDKDISDFLDKDISISDRERISPQANNISCPQKMISVCN 443
>Os09g0423800 Similar to AP2-1 protein (Fragment)
Length = 365
Score = 237 bits (605), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 120/191 (62%), Positives = 133/191 (69%), Gaps = 9/191 (4%)
Query: 56 RPKKESKEVADPSSNXXXXXKRSSIYRGVTRHRWTGRFEAHLWDKNCSTSLQNKKKGRQ- 114
+PK+ K V S + +RSS+YRGVTRHRWTGRFEAHLWDKN QNKK G+Q
Sbjct: 14 KPKRTRKSVPRESPS-----QRSSVYRGVTRHRWTGRFEAHLWDKNSWNESQNKK-GKQV 67
Query: 115 --GAYDSEEXXXXXXXXXXLKYWGPETVLNFPLEEYEKERSEMEGVSREEYLAXXXXXXX 172
GAYD EE LKYWGP+T+LNFPL YE E EMEG SREEY+
Sbjct: 68 YLGAYDDEEAAARAYDLAALKYWGPDTILNFPLSAYEGELKEMEGQSREEYIGSLRRKSS 127
Query: 173 XXXXXXXKYRGVARHHHNGRWEARIGRVLGNKYLYLGTFDTQEEAAKAYDLAAIEYRGAN 232
KYRGVARHHHNGRWEARIGRV GNKYLYLGT+ TQEEAA AYD+AAIEYRG N
Sbjct: 128 GFSRGVSKYRGVARHHHNGRWEARIGRVFGNKYLYLGTYATQEEAAMAYDMAAIEYRGLN 187
Query: 233 AVTNFDISCYL 243
AVTNFD+S Y+
Sbjct: 188 AVTNFDLSRYI 198
>Os08g0442400 Similar to BABY BOOM
Length = 419
Score = 224 bits (571), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 111/171 (64%), Positives = 124/171 (72%), Gaps = 4/171 (2%)
Query: 76 KRSSIYRGVTRHRWTGRFEAHLWDKNCSTSLQNKKKGRQ---GAYDSEEXXXXXXXXXXL 132
+RSS +RGVTRHRWTGRFEAHLWDKN Q+KK GRQ GAYD EE L
Sbjct: 51 QRSSAFRGVTRHRWTGRFEAHLWDKNTWNESQSKK-GRQVYLGAYDGEEAAARAYDLAAL 109
Query: 133 KYWGPETVLNFPLEEYEKERSEMEGVSREEYLAXXXXXXXXXXXXXXKYRGVARHHHNGR 192
KYWG +TVLNFPL Y++E EMEG SREEY+ KYRGVARHHHNG+
Sbjct: 110 KYWGHDTVLNFPLSTYDEELKEMEGQSREEYIGSLRRKSSGFSRGVSKYRGVARHHHNGK 169
Query: 193 WEARIGRVLGNKYLYLGTFDTQEEAAKAYDLAAIEYRGANAVTNFDISCYL 243
WEARIGRV GNKYLYLGT+ TQEEAA AYD+AAIE+RG NAVTNFDI+ Y+
Sbjct: 170 WEARIGRVFGNKYLYLGTYATQEEAAVAYDIAAIEHRGLNAVTNFDINLYI 220
>Os06g0145700
Length = 399
Score = 222 bits (566), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 110/171 (64%), Positives = 124/171 (72%), Gaps = 4/171 (2%)
Query: 76 KRSSIYRGVTRHRWTGRFEAHLWDKNCSTSLQNKKKGRQ---GAYDSEEXXXXXXXXXXL 132
KRSS +RGV+RHRWTGRFEAHLWDK Q KKKG+Q GAY+ E+ L
Sbjct: 77 KRSSRFRGVSRHRWTGRFEAHLWDKGTWNPTQ-KKKGKQVYLGAYNEEDAAARAYDLAAL 135
Query: 133 KYWGPETVLNFPLEEYEKERSEMEGVSREEYLAXXXXXXXXXXXXXXKYRGVARHHHNGR 192
KYWGP T NFP+ +YEKE M+GVS+EEYLA KYRGVARHHHNGR
Sbjct: 136 KYWGPTTYTNFPVADYEKELKLMQGVSKEEYLASIRRKSNGFSRGVSKYRGVARHHHNGR 195
Query: 193 WEARIGRVLGNKYLYLGTFDTQEEAAKAYDLAAIEYRGANAVTNFDISCYL 243
WEARIGRV GNKYLYLGT+ TQEEAA+AYD+AAIEYRG NAVTNFD+S Y+
Sbjct: 196 WEARIGRVFGNKYLYLGTYSTQEEAARAYDIAAIEYRGINAVTNFDLSTYI 246
>Os01g0813300
Length = 426
Score = 215 bits (548), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 110/201 (54%), Positives = 131/201 (65%), Gaps = 3/201 (1%)
Query: 45 PRTEKSTGKAK---RPKKESKEVADPSSNXXXXXKRSSIYRGVTRHRWTGRFEAHLWDKN 101
PRTE K+K R K + D ++ K SSIY+GV RHR +G++EAHLWDK
Sbjct: 40 PRTESGKKKSKHRKRAKDGTGGDDDDAAVAAAPRKGSSIYKGVARHRGSGKYEAHLWDKQ 99
Query: 102 CSTSLQNKKKGRQGAYDSEEXXXXXXXXXXLKYWGPETVLNFPLEEYEKERSEMEGVSRE 161
Q +K+GRQGAYD+EE LK WG + VLNFP++ Y KE M+ ++RE
Sbjct: 100 GWNPNQTRKRGRQGAYDTEEAAARTYDLAALKIWGSDHVLNFPIDTYRKELERMQRMTRE 159
Query: 162 EYLAXXXXXXXXXXXXXXKYRGVARHHHNGRWEARIGRVLGNKYLYLGTFDTQEEAAKAY 221
EYLA KYRGVA+HHHNGRWEARIGR +G KYLYLGTFDTQEEAA AY
Sbjct: 160 EYLATLRRKSSGFSRGVSKYRGVAKHHHNGRWEARIGRAVGKKYLYLGTFDTQEEAATAY 219
Query: 222 DLAAIEYRGANAVTNFDISCY 242
DLAAI+ RG +AVTNFD SCY
Sbjct: 220 DLAAIQLRGRSAVTNFDASCY 240
>Os05g0536250
Length = 431
Score = 211 bits (536), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 109/193 (56%), Positives = 124/193 (64%), Gaps = 18/193 (9%)
Query: 68 SSNXXXXXKRSSIYRGVTR--------------HRWTGRFEAHLWDKNCSTSLQNKKKGR 113
SS KRSS +RGV+R HRWTGRFEAHLWDKN Q +KKG+
Sbjct: 64 SSLSGITVKRSSRFRGVSRFRACRDDKKMLSCRHRWTGRFEAHLWDKNSWNPTQ-RKKGK 122
Query: 114 Q---GAYDSEEXXXXXXXXXXLKYWGPETVLNFPLEEYEKERSEMEGVSREEYLAXXXXX 170
Q GAYD EE LKYWGP T NFP+ +YEKE ME +++EEYLA
Sbjct: 123 QVYLGAYDEEEAAARAYDLAALKYWGPTTYTNFPVMDYEKELKIMENLTKEEYLASLRRK 182
Query: 171 XXXXXXXXXKYRGVARHHHNGRWEARIGRVLGNKYLYLGTFDTQEEAAKAYDLAAIEYRG 230
KYRGVARHH NGRWEARIGRV GNKYLYLGT+ TQEEAA+AYD+AAIEY+G
Sbjct: 183 SSGFSRGVSKYRGVARHHQNGRWEARIGRVFGNKYLYLGTYSTQEEAARAYDIAAIEYKG 242
Query: 231 ANAVTNFDISCYL 243
NAVTNFD+ Y+
Sbjct: 243 VNAVTNFDLRSYI 255
>Os06g0657500 Similar to ANT (Ovule development protein aintegumenta)
Length = 469
Score = 208 bits (529), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 102/186 (54%), Positives = 125/186 (67%), Gaps = 5/186 (2%)
Query: 61 SKEVADPSSNXXXX-XKRSSIYRGVTRHRWTGRFEAHLWDKNCSTSLQNKKKGRQ---GA 116
+ E+ADP+ +R+SIYRGVTRHRWTGR+EAHLWD +C Q++K GRQ G
Sbjct: 110 AAELADPARRTAETFGQRTSIYRGVTRHRWTGRYEAHLWDNSCRREGQSRK-GRQVYLGG 168
Query: 117 YDSEEXXXXXXXXXXLKYWGPETVLNFPLEEYEKERSEMEGVSREEYLAXXXXXXXXXXX 176
YD EE LKYWGP T NFP+ YE E EM+ ++R+E++A
Sbjct: 169 YDKEEKAARAYDLAALKYWGPTTTTNFPVANYETELEEMKSMTRQEFIASLRRKSSGFSR 228
Query: 177 XXXKYRGVARHHHNGRWEARIGRVLGNKYLYLGTFDTQEEAAKAYDLAAIEYRGANAVTN 236
YRGV RHH +GRW+ARIGRV GNK LYLGTF TQEEAA+AYD+AAI++RG NAVTN
Sbjct: 229 GASIYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSTQEEAAEAYDIAAIKFRGLNAVTN 288
Query: 237 FDISCY 242
FD+S Y
Sbjct: 289 FDMSRY 294
>Os04g0653600 Similar to AINTEGUMENTA-like protein
Length = 495
Score = 204 bits (519), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 98/170 (57%), Positives = 119/170 (70%), Gaps = 4/170 (2%)
Query: 76 KRSSIYRGVTRHRWTGRFEAHLWDKNCSTSLQNKKKGRQ---GAYDSEEXXXXXXXXXXL 132
+R+SIYRGVTRHRWTGR+EAHLWD +C Q++K GRQ G YD EE L
Sbjct: 140 QRTSIYRGVTRHRWTGRYEAHLWDNSCRREGQSRK-GRQVYLGGYDKEEKAARAYDLAAL 198
Query: 133 KYWGPETVLNFPLEEYEKERSEMEGVSREEYLAXXXXXXXXXXXXXXKYRGVARHHHNGR 192
KYWGP T NFP+ EYEKE EM+ ++R+E++A YRGV RHH +GR
Sbjct: 199 KYWGPSTTTNFPVAEYEKELEEMKHMTRQEFVASLRRKSSGFSRGASIYRGVTRHHQHGR 258
Query: 193 WEARIGRVLGNKYLYLGTFDTQEEAAKAYDLAAIEYRGANAVTNFDISCY 242
W+ARIGRV GNK LYLGTF T+EEAA+AYD+AAI++RG NAVTNF+I Y
Sbjct: 259 WQARIGRVAGNKDLYLGTFGTEEEAAEAYDIAAIKFRGLNAVTNFEIGRY 308
>Os03g0232200 Similar to BABY BOOM
Length = 642
Score = 202 bits (514), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 98/170 (57%), Positives = 117/170 (68%), Gaps = 4/170 (2%)
Query: 76 KRSSIYRGVTRHRWTGRFEAHLWDKNCSTSLQNKKKGRQ---GAYDSEEXXXXXXXXXXL 132
+R+S YRGVTRHRWTGR+EAHLWD +C Q +K GRQ G YD+E+ L
Sbjct: 287 QRTSQYRGVTRHRWTGRYEAHLWDNSCKKDGQTRK-GRQVYLGGYDTEDKAARAYDLAAL 345
Query: 133 KYWGPETVLNFPLEEYEKERSEMEGVSREEYLAXXXXXXXXXXXXXXKYRGVARHHHNGR 192
KYWG T +NFPLE Y E EME ++R+EY+A YRGV RHH +GR
Sbjct: 346 KYWGLSTHINFPLENYRDEIEEMERMTRQEYVAHLRRRSSGFSRGASIYRGVTRHHQHGR 405
Query: 193 WEARIGRVLGNKYLYLGTFDTQEEAAKAYDLAAIEYRGANAVTNFDISCY 242
W+ARIGRV GNK LYLGTF TQEEAA+AYD+AAI++RG NAVTNFDI+ Y
Sbjct: 406 WQARIGRVAGNKDLYLGTFSTQEEAAEAYDIAAIKFRGLNAVTNFDITRY 455
>Os03g0313100 Similar to ANT-like protein
Length = 431
Score = 166 bits (419), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 94/170 (55%), Positives = 113/170 (66%), Gaps = 4/170 (2%)
Query: 76 KRSSIYRGVTRHRWTGRFEAHLWDKNCSTSLQNKKKGRQ---GAYDSEEXXXXXXXXXXL 132
+R+S YRGVTRHRWTGR+EAHLWD C Q K+KGRQ G YD E+ L
Sbjct: 130 QRTSCYRGVTRHRWTGRYEAHLWDNTCRREGQ-KRKGRQVYLGGYDIEDKAARAYDLAAL 188
Query: 133 KYWGPETVLNFPLEEYEKERSEMEGVSREEYLAXXXXXXXXXXXXXXKYRGVARHHHNGR 192
KYWG NFP E Y KE EM+ +S++E +A YRGV RHH +GR
Sbjct: 189 KYWGANATTNFPKESYVKEIEEMQKMSKQELVASLRRKSSGFSRGASIYRGVTRHHQHGR 248
Query: 193 WEARIGRVLGNKYLYLGTFDTQEEAAKAYDLAAIEYRGANAVTNFDISCY 242
W+ARIGRV GNK LYLGTF T+EEAA+AYD+AA+++RGANAVTNF+ S Y
Sbjct: 249 WQARIGRVAGNKDLYLGTFATEEEAAEAYDVAALKFRGANAVTNFEPSRY 298
>Os07g0124700 Similar to PLETHORA1
Length = 331
Score = 162 bits (410), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 77/136 (56%), Positives = 94/136 (69%), Gaps = 3/136 (2%)
Query: 110 KKGRQ---GAYDSEEXXXXXXXXXXLKYWGPETVLNFPLEEYEKERSEMEGVSREEYLAX 166
+KGRQ G YD EE LKYWGP T +NFPLE+Y++E EM+ ++R+EY+A
Sbjct: 6 RKGRQVYLGGYDMEEKAARAYDLAALKYWGPSTHINFPLEDYQEELEEMKNMTRQEYVAH 65
Query: 167 XXXXXXXXXXXXXKYRGVARHHHNGRWEARIGRVLGNKYLYLGTFDTQEEAAKAYDLAAI 226
YRGV RHH +GRW+ARIGRV GNK LYLGTF TQEEAA+AYD+AAI
Sbjct: 66 LRRKSSGFSRGASMYRGVTRHHQHGRWQARIGRVSGNKDLYLGTFSTQEEAAEAYDVAAI 125
Query: 227 EYRGANAVTNFDISCY 242
++RG NAVTNFDI+ Y
Sbjct: 126 KFRGLNAVTNFDITRY 141
>Os07g0235800 Pathogenesis-related transcriptional factor and ERF domain
containing protein
Length = 436
Score = 122 bits (307), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 67/162 (41%), Positives = 93/162 (57%), Gaps = 9/162 (5%)
Query: 81 YRGVTRHRWTGRFEAHLWDKNCSTSLQNKKKGRQGAYDSEEXXXXXXXXXXLKYWGPETV 140
YRGVT +R TGR+E+H+WD C K+ G +D+ +K+ G +
Sbjct: 123 YRGVTFYRRTGRWESHIWD--CG------KQVYLGGFDTAHAAARAYDRAAIKFRGLDAD 174
Query: 141 LNFPLEEYEKERSEMEGVSREEYLAXXXXXXXXXXXXXXKYRGVARHHHNGRWEARIGRV 200
+NF L +YE + +M ++EE++ KYRGV H GRWEAR+G++
Sbjct: 175 INFNLNDYEDDLKQMRNWTKEEFVHILRRQSTGFARGSSKYRGVTLHK-CGRWEARMGQL 233
Query: 201 LGNKYLYLGTFDTQEEAAKAYDLAAIEYRGANAVTNFDISCY 242
LG KY+YLG FD++ EAA+AYD AAI + G AVTNFD S Y
Sbjct: 234 LGKKYIYLGLFDSEIEAARAYDRAAIRFNGREAVTNFDPSSY 275
>Os01g0899800 Pathogenesis-related transcriptional factor and ERF domain
containing protein
Length = 343
Score = 120 bits (300), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 57/95 (60%), Positives = 70/95 (73%)
Query: 148 YEKERSEMEGVSREEYLAXXXXXXXXXXXXXXKYRGVARHHHNGRWEARIGRVLGNKYLY 207
YEKE EM+ ++R+E++A YRGV RHH +GRW+ARIGRV GNK LY
Sbjct: 1 YEKELEEMKHMTRQEFVASLRRKSSGFSRGASIYRGVTRHHQHGRWQARIGRVAGNKDLY 60
Query: 208 LGTFDTQEEAAKAYDLAAIEYRGANAVTNFDISCY 242
LGTF TQEEAA+AYD+AAI++RG NAVTNFD+S Y
Sbjct: 61 LGTFSTQEEAAEAYDIAAIKFRGLNAVTNFDMSRY 95
>Os02g0614300 Similar to ANT-like protein
Length = 321
Score = 112 bits (280), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 52/85 (61%), Positives = 64/85 (75%)
Query: 158 VSREEYLAXXXXXXXXXXXXXXKYRGVARHHHNGRWEARIGRVLGNKYLYLGTFDTQEEA 217
++R+EY+A KYRGV RHH +GRW+ARIGRV GNK LYLGTF T+EEA
Sbjct: 1 MTRQEYIAYLRRNSSGFSRGASKYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSTEEEA 60
Query: 218 AKAYDLAAIEYRGANAVTNFDISCY 242
A+AYD+AAI++RG NAVTNFD+S Y
Sbjct: 61 AEAYDIAAIKFRGLNAVTNFDMSRY 85
>Os03g0818800 Similar to Floral homeotic protein
Length = 446
Score = 102 bits (254), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 74/228 (32%), Positives = 100/228 (43%), Gaps = 66/228 (28%)
Query: 46 RTEKSTGKAKRPKKESKEVADPSSNXXXXXKRSSIYRGVTRHRWTGRFEAHLWDKNCSTS 105
R + A+RP K P S RSS YRGVT +R TGR+E+H+W
Sbjct: 91 RAAEDAALAQRPVVAKKTRRGPRS-------RSSQYRGVTFYRRTGRWESHIW------- 136
Query: 106 LQNKKKGRQGAYDSEEXXXXXXXXXXLKYWGPETVLNFPLEEYEKERSEMEGVSREEYLA 165
AYD +K+ G E +NF L +YE + +M ++EE++
Sbjct: 137 ----------AYD----------RAAIKFRGLEADINFNLSDYEDDLKQMRNWTKEEFVH 176
Query: 166 XXXXXXXXXXXXXXKYRGVARHHHNGRWEARIGRVLGNKYLYLGTFDTQEEAA------- 218
K+RGV H GRWEAR+G++LG KY+YLG FDT+ EAA
Sbjct: 177 ILRRQSTGFARGSSKFRGVTLHK-CGRWEARMGQLLGKKYIYLGLFDTEVEAARYYSFDE 235
Query: 219 ------------------------KAYDLAAIEYRGANAVTNFDISCY 242
+AYD AAI + G AVTNF+ + Y
Sbjct: 236 VTCMTSHELPGFSLTFDSCLVEFGRAYDRAAIRFNGREAVTNFEPASY 283
>Os05g0389000 Similar to AP2-1 protein (Fragment)
Length = 300
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 39/95 (41%), Positives = 53/95 (55%)
Query: 115 GAYDSEEXXXXXXXXXXLKYWGPETVLNFPLEEYEKERSEMEGVSREEYLAXXXXXXXXX 174
GAYD EE LKYWG T +NFP+ +Y ++ EM+ +S+E+YL
Sbjct: 1 GAYDDEEAAARAYDLAALKYWGAGTQINFPVSDYARDLEEMQMISKEDYLVSLRRKSSAF 60
Query: 175 XXXXXKYRGVARHHHNGRWEARIGRVLGNKYLYLG 209
KYRG+ R HN RW+A +G +LGN Y+ LG
Sbjct: 61 SRGLPKYRGLPRQLHNSRWDASLGHLLGNDYMSLG 95
>Os11g0129700 Similar to AP2-1 protein (Fragment)
Length = 208
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 41/52 (78%), Positives = 43/52 (82%), Gaps = 3/52 (5%)
Query: 39 CKRRARPRTEKSTGKAKRPKKESKEVADPSSN---XXXXXKRSSIYRGVTRH 87
CKRRARPRT+KSTGKAKRPKKESKEV DPSSN KRSSIYRGVTR+
Sbjct: 39 CKRRARPRTDKSTGKAKRPKKESKEVVDPSSNGGGGGGGGKRSSIYRGVTRY 90
>Os05g0121600 Similar to AP2 domain containing protein RAP2.7 (Fragment)
Length = 130
Score = 77.4 bits (189), Expect = 2e-14, Method: Composition-based stats.
Identities = 45/124 (36%), Positives = 66/124 (53%), Gaps = 9/124 (7%)
Query: 81 YRGVTRHRWTGRFEAHLWDKNCSTSLQNKKKGRQGAYDSEEXXXXXXXXXXLKYWGPETV 140
YRGVT +R TGR+E+H+WD C K+ G +D+ +K+ G E
Sbjct: 16 YRGVTFYRRTGRWESHIWD--CG------KQVYLGGFDTAHAAARAYDRAAIKFRGVEAD 67
Query: 141 LNFPLEEYEKERSEMEGVSREEYLAXXXXXXXXXXXXXXKYRGVARHHHNGRWEARIGRV 200
+NF L +YE++ +M+ +S+EE++ KYRGV H GRWEAR+G+
Sbjct: 68 INFNLSDYEEDMRQMKSLSKEEFVHVLRRQSTGFSRGSSKYRGVTL-HKCGRWEARMGQF 126
Query: 201 LGNK 204
LG K
Sbjct: 127 LGKK 130
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.312 0.129 0.385
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 12,351,198
Number of extensions: 468507
Number of successful extensions: 1433
Number of sequences better than 1.0e-10: 18
Number of HSP's gapped: 1392
Number of HSP's successfully gapped: 18
Length of query: 443
Length of database: 17,035,801
Length adjustment: 104
Effective length of query: 339
Effective length of database: 11,605,545
Effective search space: 3934279755
Effective search space used: 3934279755
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 158 (65.5 bits)