Os03g0818800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Floral homeotic protein.
FiT-DB / Search/ Help/ Sample detail
|
Os03g0818800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Similar to Floral homeotic protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 76.84 | 0.412 | 8.5 | 1.21 | 1.89 | -1.04 | 0.0444 | 0.394 | 0.766 | 21.5 | 21.51 | 10 | -- | -- |
| 76.41 | 0.41 | 8.51 | 1.13 | 1.89 | -1.04 | -0.0188 | -- | 0.741 | 21.5 | 21.99 | 7 | -- | -- |
| 76.33 | 0.41 | 8.51 | 1.19 | 1.89 | -1.06 | -- | 0.34 | 0.758 | 21.5 | 21.95 | 8 | -- | -- |
| 76.39 | 0.41 | 8.51 | 1.13 | 1.89 | -1.04 | -- | -- | 0.739 | 21.5 | 22.16 | 3 | -- | -- |
| 271.64 | 0.768 | 8.42 | 1.47 | -- | -1.92 | -- | 0.781 | 0.91 | -- | 17.7 | 2 | -- | -- |
| 92.89 | 0.452 | 8.55 | 0.936 | 2.03 | -- | 0.109 | -- | 0.577 | 22.3 | -- | -- | -- | -- |
| 92.94 | 0.451 | 8.55 | 0.931 | 2.03 | -- | -- | -- | 0.577 | 22.3 | -- | -- | -- | -- |
| 272.29 | 0.769 | 8.43 | 1.34 | -- | -1.91 | -- | -- | 0.875 | -- | 17.6 | 2 | -- | -- |
| 107.24 | 0.485 | 8.56 | -- | 1.94 | -0.737 | -- | -- | 0.543 | 21.8 | 24.2 | 2 | -- | -- |
| 342.81 | 0.865 | 8.5 | 0.962 | -- | -- | -- | -- | 0.582 | -- | -- | -- | -- | -- |
| 115.8 | 0.503 | 8.57 | -- | 2.03 | -- | -- | -- | 0.473 | 22.3 | -- | -- | -- | -- |
| 316.01 | 0.828 | 8.48 | -- | -- | -1.45 | -- | -- | 0.677 | -- | 20.4 | 2 | -- | -- |
| 367.21 | 0.894 | 8.52 | -- | -- | -- | -- | -- | 0.475 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 72.12 | temperature | 10 | 10 | > th | dose dependent | sin | 2 | NA |
| 3 | 72.18 | temperature | 10 | 90 | > th | dose dependent | rect. | 8 | 15 |
| 12 | 72.56 | temperature | 15 | 10 | > th | dose dependent | rect. | 8 | 16 |
| 15 | 72.63 | temperature | 10 | 270 | > th | dose dependent | rect. | 6 | 17 |
| 21 | 72.74 | temperature | 15 | 10 | > th | dose dependent | rect. | 8 | 18 |
| 36 | 73.26 | temperature | 20 | 90 | > th | dose dependent | rect. | 19 | 18 |
| 38 | 73.27 | temperature | 30 | 90 | < th | dose dependent | rect. | 3 | 16 |
| 99 | 74.38 | temperature | 30 | 30 | < th | dose dependent | sin | 3 | NA |
| 136 | 74.80 | temperature | 20 | 10 | > th | dose dependent | rect. | 7 | 7 |
| 142 | 74.85 | temperature | 20 | 90 | > th | dose dependent | rect. | 7 | 6 |
| 175 | 75.24 | temperature | 30 | 270 | < th | dose independent | rect. | 1 | 15 |
| 183 | 75.29 | temperature | 20 | 90 | > th | dose dependent | rect. | 4 | 9 |
| 199 | 75.41 | radiation | 10 | 43200 | < th | dose dependent | rect. | 20 | 7 |
| 210 | 75.52 | temperature | 30 | 90 | < th | dose dependent | rect. | 23 | 20 |
| 220 | 75.62 | temperature | 10 | 270 | > th | dose dependent | rect. | 16 | 22 |
| 329 | 76.29 | temperature | 20 | 10 | > th | dose dependent | rect. | 1 | 13 |
| 332 | 76.30 | temperature | 20 | 90 | > th | dose dependent | rect. | 18 | 23 |
| 363 | 76.46 | temperature | 20 | 270 | > th | dose dependent | rect. | 7 | 3 |
| 391 | 76.58 | humidity | 80 | 10 | > th | dose dependent | sin | 0 | NA |
| 428 | 76.72 | temperature | 30 | 30 | < th | dose independent | rect. | 2 | 17 |
| 435 | 76.73 | temperature | 20 | 10 | > th | dose dependent | rect. | 15 | 23 |
| 480 | 76.84 | temperature | 20 | 10 | > th | dose dependent | rect. | 7 | 23 |
| 518 | 76.97 | temperature | 30 | 270 | < th | dose independent | rect. | 11 | 6 |
| 557 | 77.12 | humidity | 80 | 10 | > th | dose independent | sin | 1 | NA |
| 561 | 77.13 | temperature | 30 | 10 | < th | dose dependent | rect. | 24 | 19 |
| 595 | 77.24 | humidity | 70 | 90 | > th | dose dependent | rect. | 23 | 20 |
| 642 | 77.43 | humidity | 80 | 10 | > th | dose independent | rect. | 2 | 16 |
| 657 | 77.47 | temperature | 20 | 10 | > th | dose dependent | no | NA | NA |
| 705 | 77.59 | humidity | 80 | 10 | < th | dose independent | sin | 1 | NA |
| 731 | 77.66 | radiation | 1 | 270 | > th | dose independent | rect. | 16 | 22 |
| 824 | 77.91 | temperature | 20 | 10 | > th | dose dependent | rect. | 1 | 23 |
| 840 | 77.95 | humidity | 70 | 10 | > th | dose dependent | rect. | 23 | 21 |
| 881 | 78.08 | humidity | 60 | 10 | > th | dose dependent | rect. | 2 | 17 |
| 908 | 78.18 | radiation | 1 | 43200 | < th | dose dependent | rect. | 20 | 4 |
| 945 | 78.27 | temperature | 25 | 10 | > th | dose dependent | rect. | 3 | 20 |
| 973 | 78.32 | humidity | 80 | 10 | < th | dose independent | rect. | 6 | 8 |
| 982 | 78.33 | humidity | 50 | 10 | > th | dose dependent | rect. | 13 | 19 |