Os03g0313100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to ANT-like protein.
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Os03g0313100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to ANT-like protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = atmosphere,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 13.67 | 0.174 | 2.55 | 1.95 | 0.00899 | -28.7 | 0.0924 | 176 | -0.0107 | 9.55 | 994.8 | 620 | -- | -- |
| 16.18 | 0.189 | 2.88 | -9.63e-07 | 0.0316 | 0.128 | -0.00875 | -- | -0.0151 | 3.92 | 994.8 | 620 | -- | -- |
| 13.69 | 0.172 | 2.55 | 1.96 | 0.0206 | -28.8 | -- | 176 | -0.0111 | 5.47 | 994.8 | 619 | -- | -- |
| 15.67 | 0.184 | 2.88 | -0.0105 | 0.0223 | 0.305 | -- | -- | -0.0101 | 2.85 | 996.5 | 766 | -- | -- |
| 13.71 | 0.172 | 2.55 | 1.96 | -- | -28.8 | -- | 176 | -0.0107 | -- | 994.8 | 619 | -- | -- |
| 16.2 | 0.189 | 2.88 | 0.000608 | 0.0303 | -- | -0.0152 | -- | -0.0154 | 3.79 | -- | -- | -- | -- |
| 16.2 | 0.188 | 2.88 | 0.000835 | 0.0305 | -- | -- | -- | -0.0153 | 4.05 | -- | -- | -- | -- |
| 15.7 | 0.185 | 2.88 | -0.0103 | -- | 0.317 | -- | -- | -0.00936 | -- | 996.5 | 766 | -- | -- |
| 15.66 | 0.184 | 2.88 | -- | 0.0286 | 0.323 | -- | -- | -0.00969 | 5.05 | 996 | 758 | -- | -- |
| 16.25 | 0.188 | 2.88 | 0.00208 | -- | -- | -- | -- | -0.0145 | -- | -- | -- | -- | -- |
| 16.2 | 0.188 | 2.88 | -- | 0.0305 | -- | -- | -- | -0.0154 | 4.05 | -- | -- | -- | -- |
| 15.7 | 0.185 | 2.88 | -- | -- | 0.315 | -- | -- | -0.00827 | -- | 996.5 | 766 | -- | -- |
| 16.25 | 0.188 | 2.88 | -- | -- | -- | -- | -- | -0.0147 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 12.90 | temperature | 25.0 | 90 | > th | dose independent | rect. | 1 | 1 |
| 3 | 13.49 | wind | 7.0 | 90 | > th | dose independent | rect. | 22 | 1 |
| 4 | 13.49 | radiation | 10.0 | 1440 | > th | dose independent | rect. | 5 | 1 |
| 17 | 13.49 | wind | 7.0 | 90 | > th | dose dependent | rect. | 22 | 1 |
| 18 | 13.49 | temperature | 25.0 | 90 | > th | dose dependent | rect. | 1 | 1 |
| 19 | 13.49 | radiation | 10.0 | 1440 | > th | dose dependent | rect. | 5 | 1 |
| 32 | 13.50 | radiation | 30.0 | 1440 | > th | dose independent | rect. | 16 | 1 |
| 62 | 13.52 | radiation | 30.0 | 720 | > th | dose dependent | rect. | 16 | 1 |
| 87 | 13.61 | temperature | 25.0 | 10 | > th | dose dependent | rect. | 1 | 1 |
| 95 | 13.65 | atmosphere | 1000.0 | 10 | < th | dose independent | rect. | 1 | 1 |
| 117 | 13.65 | atmosphere | 1000.0 | 10 | < th | dose dependent | rect. | 1 | 1 |
| 125 | 13.67 | atmosphere | 995.0 | 720 | < th | dose independent | rect. | 14 | 1 |
| 167 | 13.67 | atmosphere | 995.0 | 720 | < th | dose dependent | rect. | 14 | 1 |
| 226 | 13.80 | atmosphere | 995.0 | 720 | < th | dose independent | sin | 6 | NA |
| 231 | 13.91 | atmosphere | 995.0 | 720 | < th | dose dependent | sin | 7 | NA |
| 263 | 14.12 | atmosphere | 995.0 | 720 | > th | dose independent | sin | 2 | NA |
| 310 | 14.32 | atmosphere | 1010.0 | 30 | < th | dose dependent | rect. | 2 | 1 |
| 318 | 14.39 | atmosphere | 995.0 | 720 | > th | dose independent | no | NA | NA |
| 351 | 14.46 | wind | 1.0 | 720 | < th | dose dependent | rect. | 12 | 2 |
| 356 | 14.47 | atmosphere | 995.0 | 720 | < th | dose independent | no | NA | NA |
| 584 | 14.54 | atmosphere | 995.0 | 720 | < th | dose dependent | no | NA | NA |
| 827 | 14.61 | atmosphere | 995.0 | 720 | > th | dose independent | sin | 14 | NA |
| 838 | 14.68 | wind | 7.0 | 1440 | < th | dose independent | rect. | 22 | 1 |
| 895 | 14.96 | wind | 3.0 | 10 | < th | dose independent | rect. | 2 | 1 |
| 897 | 14.97 | humidity | 80.0 | 10 | > th | dose independent | rect. | 2 | 1 |
| 898 | 14.97 | humidity | 90.0 | 90 | < th | dose independent | rect. | 1 | 1 |
| 906 | 14.99 | wind | 1.0 | 30 | > th | dose independent | rect. | 2 | 1 |
| 912 | 15.00 | temperature | 10.0 | 10 | > th | dose independent | rect. | 2 | 1 |
| 914 | 15.00 | temperature | 30.0 | 10 | < th | dose independent | rect. | 2 | 1 |
| 915 | 15.00 | humidity | 50.0 | 10 | > th | dose independent | rect. | 2 | 1 |
| 918 | 15.00 | atmosphere | 995.0 | 10 | > th | dose independent | rect. | 2 | 1 |
| 919 | 15.00 | atmosphere | 1010.0 | 10 | < th | dose independent | rect. | 2 | 1 |
| 921 | 15.00 | radiation | 1.0 | 10 | < th | dose independent | rect. | 2 | 1 |
| 926 | 15.00 | precipitation | 0.1 | 10 | < th | dose independent | rect. | 2 | 1 |
| 930 | 15.00 | temperature | 10.0 | 10 | > th | dose independent | rect. | 3 | 23 |
| 933 | 15.00 | radiation | 1.0 | 10 | < th | dose dependent | rect. | 2 | 1 |
| 938 | 15.00 | precipitation | 0.1 | 10 | < th | dose dependent | rect. | 2 | 1 |