Os12g0126300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to AP2-1 protein (Fragment).
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Os12g0126300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to AP2-1 protein (Fragment).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = wind,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 185.45 | 0.64 | 3.81 | -0.212 | 0.184 | 0.916 | -0.17 | -4.06 | 0.276 | 4.47 | 8.883 | 145 | -- | -- |
| 186.33 | 0.636 | 3.83 | -0.181 | 0.166 | 1.81 | -0.11 | -- | 0.259 | 5.16 | 8.451 | 144 | -- | -- |
| 185.4 | 0.634 | 3.81 | -0.211 | 0.182 | 0.971 | -- | -4.11 | 0.276 | 4.38 | 8.8 | 147 | -- | -- |
| 186.24 | 0.636 | 3.82 | -0.168 | 0.188 | 1.88 | -- | -- | 0.276 | 4.62 | 8.5 | 144 | -- | -- |
| 187.12 | 0.637 | 3.81 | -0.214 | -- | 0.899 | -- | -3.86 | 0.259 | -- | 8.754 | 144 | -- | -- |
| 196.98 | 0.658 | 3.84 | -0.319 | 0.11 | -- | 0.326 | -- | 0.224 | 5.6 | -- | -- | -- | -- |
| 197.24 | 0.658 | 3.84 | -0.318 | 0.112 | -- | -- | -- | 0.223 | 5.34 | -- | -- | -- | -- |
| 188.1 | 0.639 | 3.83 | -0.171 | -- | 1.74 | -- | -- | 0.28 | -- | 8.4 | 144 | -- | -- |
| 186.94 | 0.637 | 3.82 | -- | 0.192 | 1.98 | -- | -- | 0.3 | 4.69 | 8.428 | 144 | -- | -- |
| 197.89 | 0.657 | 3.84 | -0.314 | -- | -- | -- | -- | 0.226 | -- | -- | -- | -- | -- |
| 199.9 | 0.661 | 3.83 | -- | 0.107 | -- | -- | -- | 0.258 | 5.46 | -- | -- | -- | -- |
| 188.82 | 0.64 | 3.82 | -- | -- | 1.8 | -- | -- | 0.3 | -- | 8.4 | 144 | -- | -- |
| 200.5 | 0.661 | 3.83 | -- | -- | -- | -- | -- | 0.26 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 175.11 | wind | 9.0 | 90 | > th | dose dependent | rect. | 16 | 2 |
| 3 | 175.42 | wind | 9.0 | 90 | > th | dose independent | rect. | 16 | 2 |
| 5 | 175.85 | wind | 9.0 | 90 | > th | dose independent | rect. | 16 | 10 |
| 14 | 175.96 | wind | 9.0 | 90 | > th | dose independent | rect. | 16 | 7 |
| 17 | 175.96 | wind | 9.0 | 90 | > th | dose dependent | rect. | 16 | 10 |
| 25 | 176.02 | wind | 9.0 | 90 | > th | dose dependent | rect. | 16 | 7 |
| 31 | 176.37 | wind | 9.0 | 90 | > th | dose independent | sin | 12 | NA |
| 45 | 176.58 | wind | 9.0 | 10 | > th | dose independent | rect. | 18 | 1 |
| 48 | 176.58 | wind | 9.0 | 10 | > th | dose dependent | rect. | 18 | 1 |
| 51 | 176.60 | wind | 9.0 | 90 | > th | dose independent | sin | 14 | NA |
| 77 | 177.81 | wind | 9.0 | 90 | < th | dose independent | sin | 12 | NA |
| 78 | 177.81 | wind | 9.0 | 90 | > th | dose dependent | sin | 12 | NA |
| 79 | 177.85 | wind | 9.0 | 90 | < th | dose independent | sin | 14 | NA |
| 86 | 178.39 | wind | 9.0 | 90 | > th | dose dependent | sin | 14 | NA |
| 107 | 178.61 | wind | 9.0 | 90 | > th | dose independent | rect. | 14 | 9 |
| 122 | 178.73 | wind | 9.0 | 90 | > th | dose independent | rect. | 14 | 4 |
| 308 | 184.89 | radiation | 1.0 | 4320 | > th | dose independent | rect. | 5 | 1 |
| 309 | 184.93 | radiation | 1.0 | 4320 | < th | dose independent | rect. | 5 | 1 |
| 314 | 185.14 | wind | 9.0 | 1440 | < th | dose independent | rect. | 21 | 1 |
| 321 | 185.35 | wind | 9.0 | 10 | > th | dose independent | rect. | 17 | 18 |
| 388 | 185.95 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 21 | 1 |
| 404 | 186.08 | radiation | 1.0 | 4320 | < th | dose independent | rect. | 19 | 11 |
| 406 | 186.10 | radiation | 1.0 | 4320 | < th | dose independent | rect. | 22 | 8 |
| 434 | 186.70 | wind | 7.0 | 10 | > th | dose dependent | rect. | 16 | 2 |
| 474 | 187.04 | humidity | 90.0 | 30 | < th | dose independent | rect. | 20 | 1 |
| 475 | 187.04 | atmosphere | 1005.0 | 30 | > th | dose dependent | rect. | 17 | 1 |
| 477 | 187.07 | radiation | 1.0 | 4320 | < th | dose dependent | rect. | 3 | 2 |
| 488 | 187.11 | atmosphere | 1005.0 | 30 | > th | dose independent | rect. | 20 | 1 |
| 490 | 187.11 | humidity | 90.0 | 30 | < th | dose dependent | rect. | 20 | 1 |
| 496 | 187.15 | wind | 1.0 | 30 | > th | dose dependent | rect. | 20 | 1 |
| 497 | 187.15 | atmosphere | 1000.0 | 30 | > th | dose dependent | rect. | 20 | 1 |
| 500 | 187.17 | wind | 9.0 | 90 | > th | dose independent | no | NA | NA |
| 516 | 187.17 | wind | 9.0 | 90 | > th | dose independent | rect. | 1 | 22 |
| 534 | 187.19 | wind | 9.0 | 90 | > th | dose independent | rect. | 21 | 23 |
| 535 | 187.20 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 21 | 1 |
| 538 | 187.20 | temperature | 30.0 | 1440 | < th | dose independent | rect. | 21 | 1 |
| 542 | 187.20 | humidity | 50.0 | 1440 | > th | dose independent | rect. | 21 | 1 |
| 548 | 187.20 | atmosphere | 995.0 | 1440 | > th | dose independent | rect. | 21 | 1 |
| 549 | 187.20 | radiation | 1.0 | 1440 | < th | dose independent | rect. | 21 | 1 |
| 573 | 187.20 | temperature | 10.0 | 1440 | > th | dose independent | rect. | 22 | 23 |
| 580 | 187.22 | radiation | 40.0 | 43200 | < th | dose dependent | rect. | 21 | 1 |
| 583 | 187.23 | radiation | 40.0 | 4320 | < th | dose dependent | rect. | 21 | 1 |
| 627 | 187.32 | wind | 7.0 | 270 | < th | dose independent | rect. | 11 | 23 |
| 629 | 187.33 | temperature | 20.0 | 30 | > th | dose independent | rect. | 20 | 1 |
| 651 | 187.38 | wind | 1.0 | 30 | > th | dose independent | rect. | 20 | 1 |
| 652 | 187.38 | wind | 9.0 | 30 | < th | dose independent | rect. | 20 | 1 |
| 653 | 187.38 | temperature | 10.0 | 30 | > th | dose independent | rect. | 20 | 1 |
| 655 | 187.38 | temperature | 30.0 | 30 | < th | dose independent | rect. | 20 | 1 |
| 656 | 187.38 | humidity | 50.0 | 30 | > th | dose independent | rect. | 20 | 1 |
| 660 | 187.38 | atmosphere | 1010.0 | 30 | < th | dose independent | rect. | 20 | 1 |
| 662 | 187.38 | radiation | 1.0 | 30 | < th | dose independent | rect. | 20 | 1 |
| 667 | 187.38 | precipitation | 0.1 | 30 | < th | dose independent | rect. | 20 | 1 |
| 668 | 187.38 | temperature | 10.0 | 30 | > th | dose independent | rect. | 21 | 23 |
| 669 | 187.38 | radiation | 1.0 | 30 | < th | dose dependent | rect. | 20 | 1 |
| 674 | 187.38 | precipitation | 0.1 | 30 | < th | dose dependent | rect. | 20 | 1 |
| 690 | 187.44 | temperature | 10.0 | 30 | > th | dose dependent | rect. | 20 | 1 |
| 704 | 187.48 | temperature | 30.0 | 30 | < th | dose dependent | rect. | 20 | 1 |
| 708 | 187.54 | humidity | 50.0 | 30 | > th | dose dependent | rect. | 20 | 1 |
| 710 | 187.55 | wind | 9.0 | 30 | < th | dose dependent | rect. | 20 | 1 |
| 750 | 187.67 | wind | 7.0 | 270 | < th | dose independent | rect. | 11 | 11 |
| 773 | 187.74 | wind | 9.0 | 90 | < th | dose independent | no | NA | NA |
| 846 | 187.99 | atmosphere | 1015.0 | 30 | < th | dose dependent | rect. | 20 | 1 |
| 860 | 188.05 | wind | 9.0 | 720 | < th | dose independent | rect. | 3 | 16 |
| 880 | 188.08 | wind | 7.0 | 270 | < th | dose independent | rect. | 24 | 23 |
| 883 | 188.09 | wind | 9.0 | 10 | < th | dose independent | sin | 14 | NA |
| 904 | 188.15 | wind | 9.0 | 720 | < th | dose independent | rect. | 7 | 16 |
| 939 | 188.25 | wind | 9.0 | 10 | > th | dose independent | sin | 14 | NA |
| 942 | 188.25 | wind | 7.0 | 270 | > th | dose dependent | rect. | 19 | 23 |
| 947 | 188.28 | radiation | 1.0 | 4320 | < th | dose dependent | rect. | 19 | 11 |
| 951 | 188.29 | radiation | 1.0 | 4320 | < th | dose dependent | rect. | 22 | 8 |
| 952 | 188.29 | wind | 7.0 | 10 | > th | dose dependent | rect. | 16 | 13 |