BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os10g0479700 Os10g0479700|AK103346
(370 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os10g0479700 Protein of unknown function DUF250 domain cont... 660 0.0
Os02g0628200 Protein of unknown function DUF250 domain cont... 444 e-125
Os05g0168700 Protein of unknown function DUF250 domain cont... 380 e-105
Os01g0167500 Protein of unknown function DUF250 domain cont... 375 e-104
Os06g0506200 Protein of unknown function DUF250 domain cont... 285 4e-77
Os05g0215800 Protein of unknown function DUF250 domain cont... 197 8e-51
Os02g0614500 Protein of unknown function DUF250 domain cont... 197 1e-50
Os12g0154600 Protein of unknown function DUF250 domain cont... 188 6e-48
Os12g0154000 Protein of unknown function DUF250 domain cont... 184 1e-46
Os07g0581000 Protein of unknown function DUF250 domain cont... 183 2e-46
Os01g0823200 Conserved hypothetical protein 172 3e-43
Os04g0692000 Protein of unknown function DUF6, transmembran... 89 5e-18
Os08g0104900 Protein of unknown function DUF6, transmembran... 86 6e-17
Os02g0724500 Protein of unknown function DUF250 domain cont... 74 2e-13
>Os10g0479700 Protein of unknown function DUF250 domain containing protein
Length = 370
Score = 660 bits (1703), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 346/370 (93%), Positives = 346/370 (93%)
Query: 1 MSSATDGAASRLGVAGALGMSVTSSVAIVICNKYLISTLGFFFATTLTSWHLMVTFCTLY 60
MSSATDGAASRLGVAGALGMSVTSSVAIVICNKYLISTLGFFFATTLTSWHLMVTFCTLY
Sbjct: 1 MSSATDGAASRLGVAGALGMSVTSSVAIVICNKYLISTLGFFFATTLTSWHLMVTFCTLY 60
Query: 61 VAQRLRFFEAKPIDAQTVISFXXXXXXXXXXXXXXXXFNSVGFYQMTKLAIIPFTMLLET 120
VAQRLRFFEAKPIDAQTVISF FNSVGFYQMTKLAIIPFTMLLET
Sbjct: 61 VAQRLRFFEAKPIDAQTVISFGLLNGISIGLLNLCLGFNSVGFYQMTKLAIIPFTMLLET 120
Query: 121 IFLSKKFSRSIKISLMVLLLGVGIASVTDLQLNLLGSIIAVLTIAATCVSQILTNQIQRR 180
IFLSKKFSRSIKISLMVLLLGVGIASVTDLQLNLLGSIIAVLTIAATCVSQILTNQIQRR
Sbjct: 121 IFLSKKFSRSIKISLMVLLLGVGIASVTDLQLNLLGSIIAVLTIAATCVSQILTNQIQRR 180
Query: 181 LKVSSTQLLYQSSPYQSAVLLVTGPFVDKLLTNRDVFAFTYTFQVVAFIVLSCSIAVCVN 240
LKVSSTQLLYQSSPYQSAVLLVTGPFVDKLLTNRDVFAFTYTFQVVAFIVLSCSIAVCVN
Sbjct: 181 LKVSSTQLLYQSSPYQSAVLLVTGPFVDKLLTNRDVFAFTYTFQVVAFIVLSCSIAVCVN 240
Query: 241 FSTFLVIGTTSPVTYQVLGHLKTCLILSFGYVLLRDPFTFRNVAGILVAIFGMGLYSFFS 300
FSTFLVIGTTSPVTYQVLGHLKTCLILSFGYVLLRDPFTFRNVAGILVAIFGMGLYSFFS
Sbjct: 241 FSTFLVIGTTSPVTYQVLGHLKTCLILSFGYVLLRDPFTFRNVAGILVAIFGMGLYSFFS 300
Query: 301 VSESRDKKLADGPSPPLPISSSQMAEMKDSEPLLXXXXXXXXKSSPWNEVKGLQSFDEVP 360
VSESRDKKLADGPSPPLPISSSQMAEMKDSEPLL KSSPWNEVKGLQSFDEVP
Sbjct: 301 VSESRDKKLADGPSPPLPISSSQMAEMKDSEPLLGGGGGAAAKSSPWNEVKGLQSFDEVP 360
Query: 361 RTAKSAFSRP 370
RTAKSAFSRP
Sbjct: 361 RTAKSAFSRP 370
>Os02g0628200 Protein of unknown function DUF250 domain containing protein
Length = 341
Score = 444 bits (1142), Expect = e-125, Method: Compositional matrix adjust.
Identities = 235/327 (71%), Positives = 263/327 (80%), Gaps = 7/327 (2%)
Query: 8 AASRLGVAGALGMSVTSSVAIVICNKYLISTLGFFFATTLTSWHLMVTFCTLYVAQRLRF 67
A +LGV G+L +SV SSV+IVICNK LISTLGF FATTLTSWHLMVTFCTL+VAQR+RF
Sbjct: 3 AGFQLGVIGSLTLSVASSVSIVICNKALISTLGFPFATTLTSWHLMVTFCTLHVAQRMRF 62
Query: 68 FEAKPIDAQTVISFXXXXXXXXXXXXXXXXFNSVGFYQMTKLAIIPFTMLLETIFLSKKF 127
FE K ID QTVI F FNS+GFYQMTKLAIIPFT++LETIFL K+F
Sbjct: 63 FEPKAIDGQTVILFGLLNGTSIGLLNLSLGFNSIGFYQMTKLAIIPFTVMLETIFLKKRF 122
Query: 128 SRSIKISLMVLLLGVGIASVTDLQLNLLGSIIAVLTIAATCVSQILTNQIQRRLKVSSTQ 187
S SIK SL++LLLGVGIASVTDL+LNLLGS+++ L IA TCV QILTN IQ+RLKVSSTQ
Sbjct: 123 SESIKFSLLILLLGVGIASVTDLKLNLLGSVLSGLAIATTCVGQILTNTIQKRLKVSSTQ 182
Query: 188 LLYQSSPYQSAVLLVTGPFVDKLLTNRDVFAFTYTFQVVAFIVLSCSIAVCVNFSTFLVI 247
LLYQS+PYQ+A+L TGPFVD+LLT+R VFA YT VV FIVLSC IAV VNFSTFLVI
Sbjct: 183 LLYQSAPYQAAILFATGPFVDQLLTSRSVFAHKYTAPVVGFIVLSCLIAVSVNFSTFLVI 242
Query: 248 GTTSPVTYQVLGHLKTCLILSFGYVLLRDPFTFRNVAGILVAIFGMGLYSFFSVSESRDK 307
GTTSPVTYQVLGHLKTCL+LSFGY LL DPFT RN+ GILVAIFGM LYS+FSV ES+ K
Sbjct: 243 GTTSPVTYQVLGHLKTCLVLSFGYTLLHDPFTMRNILGILVAIFGMALYSYFSVRESKKK 302
Query: 308 KLADGPSPPLPISSSQMAEMKDSEPLL 334
D PLP+ SQM E K+ EPLL
Sbjct: 303 SAGD----PLPV--SQMPE-KEVEPLL 322
>Os05g0168700 Protein of unknown function DUF250 domain containing protein
Length = 354
Score = 380 bits (975), Expect = e-105, Method: Compositional matrix adjust.
Identities = 201/331 (60%), Positives = 247/331 (74%), Gaps = 9/331 (2%)
Query: 4 ATDGAASRLGVAGALGMSVTSSVAIVICNKYLISTLGFFFATTLTSWHLMVTFCTLYVAQ 63
G +LG GAL +SV SSV+IVICNK L+S+LGF FATTLTSWHL+VTFC+L+VA
Sbjct: 2 GVGGEKFQLGTVGALSLSVVSSVSIVICNKALMSSLGFNFATTLTSWHLLVTFCSLHVAL 61
Query: 64 RLRFFEAKPIDAQTVISFXXXXXXXXXXXXXXXXFNSVGFYQMTKLAIIPFTMLLETIFL 123
++FFE KP D++TV+ F FNSVGFYQMTKLAIIP T++LET+F
Sbjct: 62 WMKFFEHKPFDSRTVMGFGVLNGISIGLLNLSLGFNSVGFYQMTKLAIIPCTVILETLFF 121
Query: 124 SKKFSRSIKISLMVLLLGVGIASVTDLQLNLLGSIIAVLTIAATCVSQILTNQIQRRLKV 183
KKFSRSI++SL VLL GVG+A+VTDLQLN +GS++++L I TC++QI+TN IQ++ KV
Sbjct: 122 RKKFSRSIQLSLSVLLFGVGVATVTDLQLNAVGSVLSLLAIITTCIAQIMTNTIQKKFKV 181
Query: 184 SSTQLLYQSSPYQSAVLLVTGPFVDKLLTNRDVFAFTYTFQVVAFIVLSCSIAVCVNFST 243
SSTQLLYQS PYQS L + GPF+D LTN++VFAF YT QVV FIVLSC I+V VNFST
Sbjct: 182 SSTQLLYQSCPYQSLTLFLIGPFLDGFLTNQNVFAFDYTSQVVFFIVLSCLISVSVNFST 241
Query: 244 FLVIGTTSPVTYQVLGHLKTCLILSFGYVLLRDPFTFRNVAGILVAIFGMGLYSFFSVSE 303
FLVIG TSPVTYQVLGHLKTCL+L+FGYVLL DPF++RN+ GIL+A+ GM LYS+F E
Sbjct: 242 FLVIGKTSPVTYQVLGHLKTCLVLTFGYVLLHDPFSWRNILGILIAVVGMVLYSYFCTLE 301
Query: 304 SRDKKLADGPSPPLPISSSQMAEMKDSEPLL 334
+ K P Q A+ DS PL+
Sbjct: 302 GQQKNAEVSP---------QQAKEGDSAPLI 323
>Os01g0167500 Protein of unknown function DUF250 domain containing protein
Length = 356
Score = 375 bits (963), Expect = e-104, Method: Compositional matrix adjust.
Identities = 200/331 (60%), Positives = 251/331 (75%), Gaps = 13/331 (3%)
Query: 7 GAASRLGVAGALGMSVTSSVAIVICNKYLISTLGFFFATTLTSWHLMVTFCTLYVAQRLR 66
G +LG GAL +SV SSV+IVICNK L+S+LGF FATTLTSWHL+VTFC+L+VA ++
Sbjct: 5 GEKFQLGTVGALSLSVVSSVSIVICNKALMSSLGFNFATTLTSWHLLVTFCSLHVALCMK 64
Query: 67 FFEAKPIDAQTVISFXXXXXXXXXXXXXXXXFNSVGFYQMTKLAIIPFTMLLETIFLSKK 126
FE KP DA+TV+ F FNSVGFYQMTKLAIIP T++LET+F KK
Sbjct: 65 LFEHKPFDARTVMGFGVLNGISIGLLNLSLGFNSVGFYQMTKLAIIPCTVILETLFFRKK 124
Query: 127 FSRSIKISLMVLLLGVGIASVTDLQLNLLGSIIAVLTIAATCVSQILTNQIQRRLKVSST 186
FSR+I++SL VLL GVG+A+VTDLQLN +GS++++L I TC++QI+TN IQ++ KVSST
Sbjct: 125 FSRNIQLSLSVLLFGVGVATVTDLQLNAVGSVLSLLAIITTCIAQIMTNTIQKKFKVSST 184
Query: 187 QLLYQSSPYQSAVLLVTGPFVDKLLTNRDVFAFTYTFQVVAFIVLSCSIAVCVNFSTFLV 246
QLLYQS PYQ+ L + GPF+D LTN++VFAF YT QVV FIVLSC I+V VNFSTFLV
Sbjct: 185 QLLYQSCPYQALTLFIVGPFLDGFLTNQNVFAFDYTSQVVFFIVLSCLISVSVNFSTFLV 244
Query: 247 IGTTSPVTYQVLGHLKTCLILSFGYVLLRDPFTFRNVAGILVAIFGMGLYSFFSVSESRD 306
IG TSPVTYQVLGHLKTCL+L+FGYVLL DPF++RN+ GIL+A+ GM YS+F E
Sbjct: 245 IGKTSPVTYQVLGHLKTCLVLAFGYVLLHDPFSWRNILGILIAVIGMVSYSYFCTKE--- 301
Query: 307 KKLADGPSPPLPISSS-QMAEMKDSE--PLL 334
+PP P +S Q+ ++K+SE PL+
Sbjct: 302 -------APPKPTEASPQLNQVKESESDPLI 325
>Os06g0506200 Protein of unknown function DUF250 domain containing protein
Length = 226
Score = 285 bits (728), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 155/212 (73%), Positives = 174/212 (82%)
Query: 11 RLGVAGALGMSVTSSVAIVICNKYLISTLGFFFATTLTSWHLMVTFCTLYVAQRLRFFEA 70
+LGV G+L +SV SSVAIVICNK LISTLGF FATTLTSWHLM+TFCTL+VAQRL FFE
Sbjct: 8 QLGVIGSLALSVASSVAIVICNKALISTLGFPFATTLTSWHLMMTFCTLHVAQRLHFFEP 67
Query: 71 KPIDAQTVISFXXXXXXXXXXXXXXXXFNSVGFYQMTKLAIIPFTMLLETIFLSKKFSRS 130
K ID QTVI F FNS+GFYQMTKLAIIPFT+LLETIFL K+FS S
Sbjct: 68 KAIDGQTVILFGLLNGTSIGLLNLSLGFNSIGFYQMTKLAIIPFTVLLETIFLKKRFSES 127
Query: 131 IKISLMVLLLGVGIASVTDLQLNLLGSIIAVLTIAATCVSQILTNQIQRRLKVSSTQLLY 190
IK+SL+VLLLGVGIASVTDL+LNLLGS+++ L IA TCV QILTN IQ+RLKVSSTQLLY
Sbjct: 128 IKLSLLVLLLGVGIASVTDLKLNLLGSVLSGLAIATTCVGQILTNTIQKRLKVSSTQLLY 187
Query: 191 QSSPYQSAVLLVTGPFVDKLLTNRDVFAFTYT 222
QS+PYQ+A+L TGPFVD+LLTNR VFA YT
Sbjct: 188 QSAPYQAAILFATGPFVDQLLTNRSVFAHKYT 219
>Os05g0215800 Protein of unknown function DUF250 domain containing protein
Length = 335
Score = 197 bits (502), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 114/302 (37%), Positives = 172/302 (56%), Gaps = 2/302 (0%)
Query: 15 AGALGMSVTSSVAIVICNKYLISTLGFFFATTLTSWHLMVTFCTLYVAQRLRFFEAKPID 74
AGA ++ +SV I++ NK L++T GF FATTLT H T V + L + + +
Sbjct: 15 AGAWMFNIVTSVGIIMVNKALMATHGFSFATTLTGLHFATTTLMTLVMKWLGYIQPSYLP 74
Query: 75 AQTVISFXXXXXXXXXXXXXXXXFNSVGFYQMTKLAIIPFTMLLETIFLSKKFSRSIKIS 134
+I F +NSVGFYQ+ KL IIP LE +F ++SR K S
Sbjct: 75 VPELIKFVFFANLSIVGMNVSLMWNSVGFYQIAKLCIIPVLCFLEILFDKVRYSRDTKFS 134
Query: 135 LMVLLLGVGIASVTDLQLNLLGSIIAVLTIAATCVSQILTNQIQRRLKVSSTQLLYQSSP 194
+MV+L+GV + +VTD+ +N G I A++ + +T + Q + +QR+ + S LL ++P
Sbjct: 135 IMVVLVGVAVCTVTDVSVNSQGLIAAIIAVWSTALQQHYVHHLQRKYSLGSFNLLGHTAP 194
Query: 195 YQSAVLLVTGPFVDKLLTNRDVFAFTYTFQVVAFIVLSCSIAVCVNFSTFLVIGTTSPVT 254
Q+A LLV GPFVD LTN+ V F YT V FI+LSC IAV N S F+ IG + V+
Sbjct: 195 AQAASLLVLGPFVDFWLTNKRVDTFNYTAIVTFFIILSCIIAVGTNLSQFICIGRFTAVS 254
Query: 255 YQVLGHLKTCLILSFGYVLL-RDPFTFRNVAGILVAIFGMGLYSFFSVSE-SRDKKLADG 312
+QVLGH+KT L+L+ G++ ++ F G+++A+ GM Y S +++++
Sbjct: 255 FQVLGHMKTVLVLTLGFLFFGKEGLNFHVAIGMILAVIGMIWYGNASSKPGGKERQVYSA 314
Query: 313 PS 314
PS
Sbjct: 315 PS 316
>Os02g0614500 Protein of unknown function DUF250 domain containing protein
Length = 331
Score = 197 bits (500), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 116/316 (36%), Positives = 180/316 (56%), Gaps = 2/316 (0%)
Query: 15 AGALGMSVTSSVAIVICNKYLISTLGFFFATTLTSWHLMVTFCTLYVAQRLRFFEAKPID 74
AGA +V +SV I++ NK L++T GF FATTLT H T V + L + +
Sbjct: 15 AGAWMFNVVTSVGIIMVNKALMATHGFSFATTLTGLHFATTTLMTLVMKWLGHIQPSYLP 74
Query: 75 AQTVISFXXXXXXXXXXXXXXXXFNSVGFYQMTKLAIIPFTMLLETIFLSKKFSRSIKIS 134
++ F +NSVGFYQ+ KL IIP +LE +F ++SR+ K+S
Sbjct: 75 LPELVKFVFFANLSIVGMNVSLMWNSVGFYQIAKLCIIPVLCILEILFDKVRYSRNTKLS 134
Query: 135 LMVLLLGVGIASVTDLQLNLLGSIIAVLTIAATCVSQILTNQIQRRLKVSSTQLLYQSSP 194
++++L+GV + +VTD+ +N G + AV+ + +T + Q + +Q++ + S LL ++P
Sbjct: 135 IVLVLVGVAVCTVTDVSVNSKGLLAAVIAVWSTALQQHYVHHLQKKYSLGSFNLLGHTAP 194
Query: 195 YQSAVLLVTGPFVDKLLTNRDVFAFTYTFQVVAFIVLSCSIAVCVNFSTFLVIGTTSPVT 254
Q+A LL+ GPFVD LTNR V F YT V FIVLSC+IAV N S F+ IG + V+
Sbjct: 195 AQAASLLILGPFVDFWLTNRRVDTFNYTTIVTFFIVLSCTIAVGTNLSQFICIGRFTAVS 254
Query: 255 YQVLGHLKTCLILSFGYVLL-RDPFTFRNVAGILVAIFGMGLYSFFSVSE-SRDKKLADG 312
+QVLGH+KT L+L+ G++ ++ F V G+++A+ GM Y S +++++
Sbjct: 255 FQVLGHMKTILVLTLGFLFFGKEGLNFHVVLGMMLAVIGMIWYGNASSKPGGKERQIYSV 314
Query: 313 PSPPLPISSSQMAEMK 328
PS SS + K
Sbjct: 315 PSEKTQKSSQSELDQK 330
>Os12g0154600 Protein of unknown function DUF250 domain containing protein
Length = 333
Score = 188 bits (477), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 113/316 (35%), Positives = 177/316 (56%), Gaps = 6/316 (1%)
Query: 17 ALGMSVTSSVAIVICNKYLISTLGFFFATTLTSWHLMVTFCTLYVAQRLRFFEAKPIDAQ 76
A ++T+SV I++ NK L++T GF FATTLT H + T V + L + +
Sbjct: 18 AWSFNITTSVGIIMVNKALMATHGFSFATTLTGLHFVTTTLMTIVFRWLGLSQPSHLPLP 77
Query: 77 TVISFXXXXXXXXXXXXXXXXFNSVGFYQMTKLAIIPFTMLLETIFLSKKFSRSIKISLM 136
+I F +NSVGFYQ+ KL +IP + LLE +F +SR K+S+M
Sbjct: 78 DLIKFVIFSNLSIVGMNVSLMWNSVGFYQIAKLCMIPASCLLEVVFDHVHYSRDTKLSIM 137
Query: 137 VLLLGVGIASVTDLQLNLLGSIIAVLTIAATCVSQILTNQIQRRLKVSSTQLLYQSSPYQ 196
V+L+GV + +VTD+ +N G AV+ + +T + Q + +QR+ ++S LL ++P Q
Sbjct: 138 VVLIGVAVCTVTDVSVNAKGLAAAVIAVWSTALQQYYVHFLQRKYSLNSFNLLGHTAPAQ 197
Query: 197 SAVLLVTGPFVDKLLTNRDVFAFTYTFQVVAFIVLSCSIAVCVNFSTFLVIGTTSPVTYQ 256
+ LL+ GPFVD LLT + V F +T + F+ LSC IA+ VN S F+ IG S V++Q
Sbjct: 198 AGSLLLVGPFVDFLLTGKRVDHFGFTSIALFFLTLSCVIAIGVNLSQFICIGRFSAVSFQ 257
Query: 257 VLGHLKTCLILSFGYVLL-RDPFTFRNVAGILVAIFGMGLYSFFSVSESRDKKLADGPSP 315
VLGH+KT L+LS G++ ++ F+ V G+++A+ GM Y S ++
Sbjct: 258 VLGHMKTVLVLSLGFLFFGKEGLNFQVVLGMILAVVGMIWYGNASAKPGGKER-----RS 312
Query: 316 PLPISSSQMAEMKDSE 331
LP+ S + + D +
Sbjct: 313 VLPVRSEKPSGALDEK 328
>Os12g0154000 Protein of unknown function DUF250 domain containing protein
Length = 334
Score = 184 bits (466), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 107/278 (38%), Positives = 165/278 (59%), Gaps = 1/278 (0%)
Query: 17 ALGMSVTSSVAIVICNKYLISTLGFFFATTLTSWHLMVTFCTLYVAQRLRFFEAKPIDAQ 76
A ++T+SV I++ NK L++T GF FATTLT H + T V + L + +
Sbjct: 18 AWSFNITTSVGIIMVNKALMATHGFSFATTLTGLHFVTTTLMTIVFRWLGLSQPSHLPIP 77
Query: 77 TVISFXXXXXXXXXXXXXXXXFNSVGFYQMTKLAIIPFTMLLETIFLSKKFSRSIKISLM 136
+I F +NSVGFYQ+ KL +IP + LLE +F +SR K+S+M
Sbjct: 78 DLIKFVIFSNLSIVGMNVSLMWNSVGFYQIAKLCMIPASCLLEVVFDRVHYSRDTKLSIM 137
Query: 137 VLLLGVGIASVTDLQLNLLGSIIAVLTIAATCVSQILTNQIQRRLKVSSTQLLYQSSPYQ 196
V+L+GV + +VTD+ +N G AV+ + +T + Q + +QR+ ++S LL ++P Q
Sbjct: 138 VVLIGVAVCTVTDVSVNAKGLAAAVIAVWSTALQQYYVHFLQRKYSLNSFNLLGHTAPAQ 197
Query: 197 SAVLLVTGPFVDKLLTNRDVFAFTYTFQVVAFIVLSCSIAVCVNFSTFLVIGTTSPVTYQ 256
+ LL+ GPFVD LLT + V F +T + F+ LSC IA+ VN S F+ IG S V++Q
Sbjct: 198 AGSLLLVGPFVDFLLTGKRVDHFGFTSIALFFLTLSCVIAIGVNLSQFICIGRFSAVSFQ 257
Query: 257 VLGHLKTCLILSFGYVLL-RDPFTFRNVAGILVAIFGM 293
VLGH+KT L+LS G++ ++ F+ V G+++A+ GM
Sbjct: 258 VLGHMKTVLVLSLGFLFFGKEGLNFQVVLGMILAVVGM 295
>Os07g0581000 Protein of unknown function DUF250 domain containing protein
Length = 345
Score = 183 bits (465), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 109/320 (34%), Positives = 179/320 (55%), Gaps = 9/320 (2%)
Query: 16 GALGMSVTSSVAIVICNKYLISTLG--FFFATTLTSWHLMVTFCTLYVAQRLRFFEAKPI 73
GA M+V SSV I++ NK L+S+ G F FATTLT +H VT +++ + +K +
Sbjct: 14 GAWAMNVVSSVGIIMANKQLMSSSGYAFSFATTLTGFHFTVTALVGWISNATGYSVSKHV 73
Query: 74 DAQTVISFXXXXXXXXXXXXXXXXFNSVGFYQMTKLAIIPFTMLLETIFLSKKFSRSIKI 133
++ F NSVGFYQ++KL++IP L+E + SK ++ +
Sbjct: 74 PLWELVWFSLVANTSITGMNLSLMLNSVGFYQISKLSMIPVVCLMEWVLNSKHYTTKVIS 133
Query: 134 SLMVLLLGVGIASVTDLQLNLLGSIIAVLTIAATCVSQILTNQIQRRLKVSSTQLLYQSS 193
+++V+ GVGI +VTD+++N G I A + + T + QI Q++ + S +LL +++
Sbjct: 134 AVVVVAAGVGICTVTDVEVNAKGFICACVAVFCTSLQQITIGSFQKKYNIGSFELLSKTA 193
Query: 194 PYQSAVLLVTGPFVDKLLTNRDVFAFTYTFQVVAFIVLSCSIAVCVNFSTFLVIGTTSPV 253
P Q+ L++ GPF D L R + + ++ FI+LSCS+AV N S +L IG S
Sbjct: 194 PIQAVSLIILGPFADYYLNGRWLLNYNFSTGATFFILLSCSLAVFCNMSQYLCIGRFSAT 253
Query: 254 TYQVLGHLKTCLILSFGYVLLRDPFTFRNVAGILVAIFGMGLYSFFSVSESRDKKLADGP 313
++QVLGH+KT +L G++L T +N+ G+L+A+ GM +YS+ +E +
Sbjct: 254 SFQVLGHMKTVCVLILGWILFDSALTVKNILGMLLAVMGMVVYSWAVETEKK-------A 306
Query: 314 SPPLPISSSQMAEMKDSEPL 333
S P+P + S M + + PL
Sbjct: 307 SAPIPRNKSDMLDDSEDVPL 326
>Os01g0823200 Conserved hypothetical protein
Length = 182
Score = 172 bits (437), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 92/164 (56%), Positives = 123/164 (75%)
Query: 13 GVAGALGMSVTSSVAIVICNKYLISTLGFFFATTLTSWHLMVTFCTLYVAQRLRFFEAKP 72
G A ALG+SV SSV+IV+CNK L+STLGF FATTLTSWHL+VTFC+L+VA +++ FE K
Sbjct: 8 GTAAALGLSVVSSVSIVVCNKALMSTLGFVFATTLTSWHLLVTFCSLHVALQMKLFENKD 67
Query: 73 IDAQTVISFXXXXXXXXXXXXXXXXFNSVGFYQMTKLAIIPFTMLLETIFLSKKFSRSIK 132
+D +T+I F FNS+GFYQ+TKLAIIP T+ LETI K FSR I+
Sbjct: 68 LDPKTIIGFGILNGISIGLLNLSLGFNSIGFYQVTKLAIIPCTVSLETILFRKTFSRRIQ 127
Query: 133 ISLMVLLLGVGIASVTDLQLNLLGSIIAVLTIAATCVSQILTNQ 176
++L VLL GVG+A+VTDLQLN LGS++++ + TC+SQI++++
Sbjct: 128 MALAVLLFGVGVATVTDLQLNRLGSLLSLFAVLTTCISQIVSSK 171
>Os04g0692000 Protein of unknown function DUF6, transmembrane domain containing
protein
Length = 350
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 76/303 (25%), Positives = 135/303 (44%), Gaps = 17/303 (5%)
Query: 25 SVAIVICNKYLISTLGFFFATTLTSWHLMVTFCTLYVAQRLRFFEAKPI-------DAQT 77
+V ++I NK++ L F F T++ H + + Y+A + +AKP+ +
Sbjct: 29 NVTVIIINKWIFQKLDFKFPLTVSCVHFICSSIGAYIA--IHVLKAKPLIQVEPEDRWRR 86
Query: 78 VISFXXXXXXXXXXXXXXXXFNSVGFYQMTKLAIIPFTMLLETIFLSKKFSRSIKISLMV 137
+ + V F Q K T++L+ + SK F I SL+
Sbjct: 87 IFPMSFVFCINIVLGNVSLRYIPVSFMQTIKSFTPATTVILQWLVWSKHFEWRIWASLVP 146
Query: 138 LLLGVGIASVTDLQLNLLGSIIAVLTIAATCVSQILTNQIQRRLKVSSTQLLYQSSPYQS 197
++ G+ + S+T+L N+ G A++ AT IL + K S +Y +P+ +
Sbjct: 147 IVGGILLTSITELSFNMFGFCAAMVGCLATSTKTILAESLLHGYKFDSINTVYYMAPFAT 206
Query: 198 AVLLVTGPFVDKLLTNRDVFAFTYTFQVVA----FIVLSCSIAVCVNFSTFLVIGTTSPV 253
+L + P V LL V + YT +A I+ S +A C+NFS F VI +T+ V
Sbjct: 207 MILAL--PAV--LLEGGGVVTWFYTHDSIASALVIIIGSGVLAFCLNFSIFYVIHSTTAV 262
Query: 254 TYQVLGHLKTCLILSFGYVLLRDPFTFRNVAGILVAIFGMGLYSFFSVSESRDKKLADGP 313
T+ V G+LK + + +++ R+P + N G + + G Y + + + +A G
Sbjct: 263 TFNVAGNLKVAVAVLVSWLIFRNPISPMNAIGCAITLVGCTFYGYVRHLIPQQQAVAPGT 322
Query: 314 SPP 316
P
Sbjct: 323 GSP 325
>Os08g0104900 Protein of unknown function DUF6, transmembrane domain containing
protein
Length = 337
Score = 85.5 bits (210), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 71/283 (25%), Positives = 128/283 (45%), Gaps = 13/283 (4%)
Query: 25 SVAIVICNKYLISTLGFFFATTLTSWHLMVTFCTLYVAQRL----RFFEAKPID-AQTVI 79
+V ++I NK++ L F F T++ H + + Y+A ++ E P D + +
Sbjct: 25 NVTVIIMNKWIFQKLEFKFPLTVSCVHFICSSIGAYIAIKILKMKPLIEVAPEDRWRRIF 84
Query: 80 SFXXXXXXXXXXXXXXXXFNSVGFYQMTKLAIIPFTMLLETIFLSKKFSRSIKISLMVLL 139
+ V F Q K T++L+ + K F I SL+ ++
Sbjct: 85 PMSFVFCINIVLGNVSLRYIPVSFMQTIKSFTPATTVILQWLVWRKYFEWRIWASLVPIV 144
Query: 140 LGVGIASVTDLQLNLLGSIIAVLTIAATCVSQILTNQIQRRLKVSSTQLLYQSSPYQSAV 199
G+ + S+T+L N+ G A++ AT IL + K S +Y +P+ + +
Sbjct: 145 GGIMLTSITELSFNMFGFCAAMVGCLATSTKTILAESLLHGYKFDSINTVYYMAPFATMI 204
Query: 200 LLVTGPFVDKLLTNRDVFAFTYTFQ--VVAFIVLSCS--IAVCVNFSTFLVIGTTSPVTY 255
L V +L V + YT+ V A I+++ S +A C+NFS F VI +T+ VT+
Sbjct: 205 LSVPA----IVLEGSGVINWLYTYDSIVPALIIITTSGVLAFCLNFSIFYVIHSTTAVTF 260
Query: 256 QVLGHLKTCLILSFGYVLLRDPFTFRNVAGILVAIFGMGLYSF 298
V G+LK + + +++ R+P + N G + + G Y +
Sbjct: 261 NVAGNLKVAVAVLVSWMIFRNPISAMNAVGCAITLVGCTFYGY 303
>Os02g0724500 Protein of unknown function DUF250 domain containing protein
Length = 371
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 82/168 (48%), Gaps = 7/168 (4%)
Query: 17 ALGMSVTSSVAIVICNKYLISTLGFFFATTLTSWHLMVTFCTLYVAQRLRFFEAKPIDAQ 76
AL + +V I++ NK ++ ++GF F L+ H V F + + + + P
Sbjct: 112 ALTFNFAVAVGIIMANKMVMGSVGFKFPIALSLIHYAVAFVLMAILKTMSMLPVAPPSKS 171
Query: 77 TVISFXXXXXXXXXXXXXXXXFN-----SVGFYQMTKLAIIPFTMLLETIFLSKKFSRSI 131
T F N SVGFYQM K+A+ P ++ E + K+ S
Sbjct: 172 T--PFSSLFALGAVMSLSTGLANNFPLFSVGFYQMAKIAVTPTIVVAEFMIFQKRVSSQK 229
Query: 132 KISLMVLLLGVGIASVTDLQLNLLGSIIAVLTIAATCVSQILTNQIQR 179
I+L ++ GV +A+VTDL+ N G+++A+ I + V++IL + +Q+
Sbjct: 230 VITLAIVSFGVAVATVTDLEFNFFGAVVALAWIVPSAVNKILWSNLQQ 277
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.326 0.136 0.390
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 9,341,362
Number of extensions: 320087
Number of successful extensions: 1219
Number of sequences better than 1.0e-10: 20
Number of HSP's gapped: 1207
Number of HSP's successfully gapped: 20
Length of query: 370
Length of database: 17,035,801
Length adjustment: 102
Effective length of query: 268
Effective length of database: 11,709,973
Effective search space: 3138272764
Effective search space used: 3138272764
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 157 (65.1 bits)