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Os01g0167500

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Protein of unknown function DUF250 domain containing protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 11.5 (0.0139) R2 : 0.794
β1 : -- (--) R2dD : -- R2D : --
β2 : 1.44 (0.0363) R2dC : 0.718 R2C : 0.703
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.363 (0.0292) R2dN8 : 0.0902 R2N8 : 0.0758
σ : 0.262
deviance : 31.27
__
_____
C
peak time of C : 6.61
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = radiation, response mode = < th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
26.41 0.241 11.5 0.318 1.47 0.331 0.158 0.368 0.418 7.62 6.476 101 -- --
27.08 0.242 11.5 0.32 1.48 0.345 -0.0662 -- 0.417 7.64 9.999 101 -- --
26.47 0.24 11.5 0.323 1.48 0.336 -- 0.32 0.418 7.63 6.333 101 -- --
27.05 0.242 11.5 0.32 1.49 0.347 -- -- 0.419 7.66 5.7 101 -- --
60.62 0.363 11.6 0.296 -- 1.07 -- -0.902 0.476 -- 1.041 717 -- --
28.64 0.251 11.5 0.313 1.44 -- 0.0914 -- 0.398 6.62 -- -- -- --
28.66 0.251 11.5 0.315 1.44 -- -- -- 0.398 6.62 -- -- -- --
33.71 0.27 11.5 0.443 -- 1.85 -- -- 0.479 -- 2.812 801 -- --
29.69 0.254 11.5 -- 1.48 0.335 -- -- 0.381 7.59 10 101 -- --
136.26 0.545 11.5 0.349 -- -- -- -- 0.427 -- -- -- -- --
31.27 0.262 11.5 -- 1.44 -- -- -- 0.363 6.61 -- -- -- --
38.53 0.289 11.5 -- -- 1.83 -- -- 0.436 -- 4.29 791 -- --
139.46 0.551 11.5 -- -- -- -- -- 0.388 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 23.63 wind 7.0 720 < th dose dependent rect. 6 3
3 23.71 wind 9.0 720 < th dose dependent rect. 5 5
7 24.07 wind 5.0 720 < th dose independent rect. 6 3
17 24.53 wind 9.0 720 < th dose independent rect. 21 21
20 24.62 wind 9.0 720 < th dose independent rect. 6 19
23 24.71 wind 9.0 720 < th dose independent rect. 4 14
24 24.72 wind 9.0 720 < th dose dependent rect. 5 13
29 24.78 wind 9.0 720 < th dose dependent rect. 6 11
32 24.82 wind 9.0 720 < th dose independent rect. 6 10
48 24.92 humidity 50.0 90 > th dose dependent rect. 11 4
54 25.00 wind 9.0 270 < th dose independent rect. 12 23
60 25.06 wind 9.0 14400 < th dose independent rect. 18 1
61 25.06 wind 7.0 14400 > th dose dependent rect. 18 1
63 25.07 atmosphere 995.0 270 > th dose independent rect. 9 12
65 25.07 wind 1.0 270 > th dose dependent rect. 11 1
68 25.10 wind 9.0 720 < th dose independent rect. 13 5
70 25.11 radiation 10.0 720 < th dose independent rect. 1 6
72 25.11 radiation 10.0 90 < th dose dependent rect. 19 19
74 25.12 atmosphere 995.0 270 > th dose independent rect. 17 12
75 25.12 wind 9.0 720 < th dose independent rect. 12 14
80 25.13 wind 1.0 270 > th dose dependent rect. 9 4
82 25.14 wind 7.0 720 < th dose independent rect. 21 13
84 25.16 wind 3.0 90 > th dose independent rect. 10 4
87 25.16 wind 7.0 90 < th dose independent rect. 14 21
89 25.16 humidity 50.0 270 > th dose dependent rect. 9 4
92 25.17 temperature 15.0 270 > th dose independent rect. 18 11
93 25.18 temperature 15.0 270 > th dose independent rect. 5 13
97 25.18 radiation 10.0 720 < th dose dependent rect. 1 6
107 25.21 precipitation 0.1 720 < th dose independent rect. 21 21
108 25.21 precipitation 0.1 720 < th dose dependent rect. 21 21
110 25.23 temperature 15.0 720 > th dose independent rect. 18 3
115 25.24 radiation 10.0 720 < th dose independent rect. 17 14
120 25.26 wind 3.0 270 > th dose independent rect. 11 1
121 25.26 wind 9.0 14400 > th dose independent rect. 18 1
130 25.28 humidity 50.0 720 > th dose independent rect. 18 19
131 25.28 radiation 10.0 90 < th dose independent rect. 19 19
133 25.28 wind 9.0 90 < th dose dependent rect. 6 13
138 25.30 atmosphere 1010.0 720 < th dose independent rect. 18 3
149 25.32 atmosphere 995.0 720 > th dose independent rect. 24 15
155 25.34 temperature 15.0 720 > th dose independent rect. 5 5
156 25.34 wind 9.0 720 < th dose independent rect. 14 10
158 25.34 radiation 30.0 90 < th dose dependent sin 11 NA
162 25.35 humidity 50.0 270 > th dose dependent rect. 11 1
167 25.36 atmosphere 995.0 720 > th dose independent rect. 17 5
168 25.36 atmosphere 1010.0 90 < th dose independent rect. 19 11
186 25.39 wind 9.0 270 < th dose independent rect. 13 12
187 25.39 precipitation 0.1 270 < th dose independent rect. 5 13
193 25.39 precipitation 0.1 270 < th dose dependent rect. 5 13
196 25.40 temperature 15.0 720 > th dose independent rect. 6 3
202 25.41 radiation 40.0 270 < th dose independent rect. 9 4
204 25.41 radiation 10.0 270 < th dose independent rect. 17 12
206 25.42 temperature 30.0 270 < th dose independent rect. 9 5
207 25.42 wind 7.0 720 < th dose independent rect. 22 11
210 25.42 wind 9.0 90 < th dose dependent rect. 14 21
224 25.45 atmosphere 1015.0 720 < th dose independent rect. 9 13
228 25.45 radiation 10.0 270 < th dose dependent rect. 17 12
229 25.46 radiation 1.0 720 > th dose independent rect. 6 3
236 25.47 humidity 50.0 720 > th dose independent rect. 24 14
240 25.47 radiation 10.0 90 < th dose dependent rect. 19 12
241 25.48 precipitation 0.1 720 < th dose independent rect. 22 11
247 25.48 precipitation 0.1 720 < th dose dependent rect. 22 11
253 25.49 temperature 10.0 10 > th dose dependent rect. 7 12
254 25.50 radiation 10.0 90 < th dose independent sin 11 NA
258 25.50 atmosphere 1015.0 720 < th dose independent rect. 10 11
259 25.50 precipitation 0.1 720 < th dose independent rect. 21 13
268 25.50 precipitation 0.1 720 < th dose dependent rect. 21 13
303 25.53 wind 1.0 720 > th dose dependent rect. 5 8
319 25.55 atmosphere 995.0 720 > th dose independent rect. 9 21
328 25.56 precipitation 0.1 270 < th dose independent rect. 12 23
335 25.56 precipitation 0.1 270 < th dose dependent rect. 12 23
339 25.57 atmosphere 1015.0 720 < th dose independent rect. 17 5
340 25.57 precipitation 0.1 270 < th dose independent rect. 13 12
345 25.57 precipitation 0.1 270 < th dose dependent rect. 13 12
347 25.57 wind 9.0 720 < th dose dependent rect. 22 19
348 25.58 precipitation 0.1 720 < th dose independent rect. 6 3
353 25.58 humidity 50.0 270 > th dose independent rect. 1 12
355 25.58 precipitation 0.1 720 < th dose dependent rect. 6 3
359 25.59 humidity 60.0 270 > th dose independent rect. 9 4
365 25.59 radiation 10.0 720 < th dose dependent rect. 1 11
381 25.60 temperature 10.0 90 > th dose dependent rect. 6 13
384 25.61 humidity 60.0 90 > th dose independent rect. 11 3
389 25.61 atmosphere 995.0 720 > th dose independent rect. 10 19
395 25.62 wind 9.0 14400 < th dose independent rect. 16 3
396 25.62 radiation 10.0 720 < th dose independent rect. 18 3
416 25.63 atmosphere 995.0 720 > th dose independent rect. 18 19
417 25.63 humidity 90.0 14400 > th dose dependent rect. 3 1
424 25.64 humidity 50.0 270 > th dose independent rect. 18 11
431 25.64 atmosphere 1015.0 270 < th dose independent rect. 5 13
432 25.64 precipitation 0.1 720 < th dose independent rect. 22 19
442 25.64 precipitation 0.1 720 < th dose dependent rect. 22 19
450 25.65 humidity 50.0 720 > th dose independent rect. 6 3
451 25.65 atmosphere 995.0 720 > th dose independent rect. 6 3
452 25.65 atmosphere 1015.0 720 < th dose independent rect. 6 3
454 25.65 humidity 50.0 10 > th dose independent rect. 11 4
457 25.65 precipitation 0.1 720 < th dose independent rect. 13 5
458 25.65 wind 5.0 14400 > th dose independent rect. 17 7
464 25.65 temperature 10.0 720 > th dose independent rect. 9 21
468 25.65 precipitation 0.1 720 < th dose dependent rect. 13 5
479 25.66 wind 9.0 14400 > th dose independent rect. 16 3
484 25.66 radiation 20.0 14400 > th dose independent rect. 17 14
486 25.66 wind 1.0 14400 > th dose dependent rect. 21 1
499 25.67 humidity 50.0 720 > th dose independent rect. 18 3
508 25.67 wind 5.0 14400 < th dose independent rect. 17 7
511 25.67 temperature 10.0 720 > th dose independent rect. 21 21
521 25.68 precipitation 0.1 720 < th dose independent rect. 5 5
525 25.68 radiation 40.0 270 < th dose dependent rect. 10 3
527 25.68 precipitation 0.1 720 < th dose dependent rect. 5 5
533 25.69 radiation 20.0 14400 > th dose independent rect. 6 1
560 25.69 radiation 30.0 720 < th dose dependent rect. 18 3
569 25.70 wind 9.0 720 < th dose independent rect. 18 3
570 25.70 wind 9.0 14400 < th dose independent rect. 16 5
577 25.70 wind 7.0 14400 < th dose dependent rect. 21 1
593 25.71 wind 9.0 270 < th dose independent rect. 18 11
616 25.72 humidity 50.0 720 > th dose independent rect. 2 10
626 25.72 radiation 1.0 90 > th dose dependent sin 12 NA
643 25.73 wind 9.0 14400 > th dose independent rect. 16 7
671 25.74 wind 5.0 14400 > th dose independent rect. 17 11
676 25.74 precipitation 0.1 270 < th dose independent rect. 13 20
687 25.74 precipitation 0.1 270 < th dose dependent rect. 13 20
691 25.75 wind 5.0 14400 < th dose independent rect. 17 11
712 25.76 wind 9.0 14400 < th dose independent rect. 16 9
737 25.77 temperature 10.0 720 > th dose independent rect. 22 11
738 25.77 humidity 50.0 720 > th dose independent rect. 22 11
739 25.77 atmosphere 995.0 720 > th dose independent rect. 22 11
741 25.77 temperature 10.0 720 > th dose independent rect. 9 13
743 25.77 atmosphere 995.0 720 > th dose independent rect. 1 20
751 25.77 wind 9.0 270 < th dose dependent rect. 21 12
763 25.78 temperature 10.0 720 > th dose independent rect. 10 11
766 25.78 temperature 10.0 720 > th dose independent rect. 21 13
767 25.78 atmosphere 995.0 720 > th dose independent rect. 21 13
777 25.79 wind 1.0 720 > th dose independent rect. 18 3
801 25.80 atmosphere 995.0 1440 > th dose independent rect. 12 3
803 25.80 radiation 1.0 720 > th dose independent rect. 4 5
852 25.81 humidity 50.0 10 > th dose dependent rect. 20 19
879 25.83 atmosphere 995.0 720 > th dose independent rect. 5 5
880 25.83 atmosphere 1015.0 720 < th dose independent rect. 5 5
884 25.83 temperature 10.0 270 > th dose independent rect. 1 12
885 25.83 temperature 10.0 270 > th dose independent rect. 13 12
886 25.83 atmosphere 995.0 270 > th dose independent rect. 1 12
887 25.83 atmosphere 1015.0 270 < th dose independent rect. 1 12
892 25.83 temperature 10.0 720 > th dose independent rect. 10 19
906 25.84 wind 9.0 720 < th dose independent rect. 1 5
907 25.84 temperature 10.0 720 > th dose independent rect. 1 5
908 25.84 temperature 30.0 720 < th dose independent rect. 1 5
909 25.84 humidity 50.0 720 > th dose independent rect. 1 5
913 25.84 atmosphere 995.0 720 > th dose independent rect. 1 5
923 25.84 temperature 10.0 720 > th dose independent rect. 6 19
927 25.84 wind 9.0 14400 > th dose dependent rect. 18 5
944 25.85 temperature 10.0 720 > th dose independent rect. 13 5
945 25.85 atmosphere 1015.0 720 < th dose independent rect. 13 5
958 25.85 temperature 15.0 10 > th dose independent rect. 19 12
960 25.85 humidity 50.0 720 > th dose independent rect. 21 13
962 25.85 temperature 10.0 720 > th dose independent rect. 18 19