BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os01g0167500 Os01g0167500|AK119227
(356 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os01g0167500 Protein of unknown function DUF250 domain cont... 617 e-177
Os05g0168700 Protein of unknown function DUF250 domain cont... 548 e-156
Os02g0628200 Protein of unknown function DUF250 domain cont... 361 e-100
Os10g0479700 Protein of unknown function DUF250 domain cont... 338 5e-93
Os06g0506200 Protein of unknown function DUF250 domain cont... 221 6e-58
Os02g0614500 Protein of unknown function DUF250 domain cont... 174 6e-44
Os05g0215800 Protein of unknown function DUF250 domain cont... 168 7e-42
Os01g0823200 Conserved hypothetical protein 167 1e-41
Os07g0581000 Protein of unknown function DUF250 domain cont... 165 4e-41
Os12g0154600 Protein of unknown function DUF250 domain cont... 164 7e-41
Os12g0154000 Protein of unknown function DUF250 domain cont... 159 3e-39
Os04g0692000 Protein of unknown function DUF6, transmembran... 81 1e-15
Os08g0104900 Protein of unknown function DUF6, transmembran... 77 2e-14
>Os01g0167500 Protein of unknown function DUF250 domain containing protein
Length = 356
Score = 617 bits (1591), Expect = e-177, Method: Compositional matrix adjust.
Identities = 310/356 (87%), Positives = 310/356 (87%)
Query: 1 MGVTGEKFQLGTVGAXXXXXXXXXXXXXCNKALMSSLGFNFATTLTSWHLLVTFCSLHVA 60
MGVTGEKFQLGTVGA CNKALMSSLGFNFATTLTSWHLLVTFCSLHVA
Sbjct: 1 MGVTGEKFQLGTVGALSLSVVSSVSIVICNKALMSSLGFNFATTLTSWHLLVTFCSLHVA 60
Query: 61 LCMKLFEHKPFDARTVMGFXXXXXXXXXXXXXXXXXXXXXFYQMTKLAIIPCTVILETLF 120
LCMKLFEHKPFDARTVMGF FYQMTKLAIIPCTVILETLF
Sbjct: 61 LCMKLFEHKPFDARTVMGFGVLNGISIGLLNLSLGFNSVGFYQMTKLAIIPCTVILETLF 120
Query: 121 FRKKFSRNIQXXXXXXXXXXXXATVTDLQLNAVGSVLSLLAIITTCIAQIMTNTIQKKFK 180
FRKKFSRNIQ ATVTDLQLNAVGSVLSLLAIITTCIAQIMTNTIQKKFK
Sbjct: 121 FRKKFSRNIQLSLSVLLFGVGVATVTDLQLNAVGSVLSLLAIITTCIAQIMTNTIQKKFK 180
Query: 181 VSSTQLLYQSCPYQALTLFIVGPFLDGFLTNQNVFAFDYTSQVVFFIVLSCLISVSVNFS 240
VSSTQLLYQSCPYQALTLFIVGPFLDGFLTNQNVFAFDYTSQVVFFIVLSCLISVSVNFS
Sbjct: 181 VSSTQLLYQSCPYQALTLFIVGPFLDGFLTNQNVFAFDYTSQVVFFIVLSCLISVSVNFS 240
Query: 241 TFLVIGKTSPVTYQVLGHLKTCLVLAFGYVLLHDPFSWRNILGILIAVIGMVSYSYFCTK 300
TFLVIGKTSPVTYQVLGHLKTCLVLAFGYVLLHDPFSWRNILGILIAVIGMVSYSYFCTK
Sbjct: 241 TFLVIGKTSPVTYQVLGHLKTCLVLAFGYVLLHDPFSWRNILGILIAVIGMVSYSYFCTK 300
Query: 301 EAPPKPTEASPQLNQVKESESDPLISDSLSTAENGGNAGDDEALKVPMWSSKYSKA 356
EAPPKPTEASPQLNQVKESESDPLISDSLSTAENGGNAGDDEALKVPMWSSKYSKA
Sbjct: 301 EAPPKPTEASPQLNQVKESESDPLISDSLSTAENGGNAGDDEALKVPMWSSKYSKA 356
>Os05g0168700 Protein of unknown function DUF250 domain containing protein
Length = 354
Score = 548 bits (1413), Expect = e-156, Method: Compositional matrix adjust.
Identities = 279/356 (78%), Positives = 287/356 (80%), Gaps = 2/356 (0%)
Query: 1 MGVTGEKFQLGTVGAXXXXXXXXXXXXXCNKALMSSLGFNFATTLTSWHLLVTFCSLHVA 60
MGV GEKFQLGTVGA CNKALMSSLGFNFATTLTSWHLLVTFCSLHVA
Sbjct: 1 MGVGGEKFQLGTVGALSLSVVSSVSIVICNKALMSSLGFNFATTLTSWHLLVTFCSLHVA 60
Query: 61 LCMKLFEHKPFDARTVMGFXXXXXXXXXXXXXXXXXXXXXFYQMTKLAIIPCTVILETLF 120
L MK FEHKPFD+RTVMGF FYQMTKLAIIPCTVILETLF
Sbjct: 61 LWMKFFEHKPFDSRTVMGFGVLNGISIGLLNLSLGFNSVGFYQMTKLAIIPCTVILETLF 120
Query: 121 FRKKFSRNIQXXXXXXXXXXXXATVTDLQLNAVGSVLSLLAIITTCIAQIMTNTIQKKFK 180
FRKKFSR+IQ ATVTDLQLNAVGSVLSLLAIITTCIAQIMTNTIQKKFK
Sbjct: 121 FRKKFSRSIQLSLSVLLFGVGVATVTDLQLNAVGSVLSLLAIITTCIAQIMTNTIQKKFK 180
Query: 181 VSSTQLLYQSCPYQALTLFIVGPFLDGFLTNQNVFAFDYTSQVVFFIVLSCLISVSVNFS 240
VSSTQLLYQSCPYQ+LTLF++GPFLDGFLTNQNVFAFDYTSQVVFFIVLSCLISVSVNFS
Sbjct: 181 VSSTQLLYQSCPYQSLTLFLIGPFLDGFLTNQNVFAFDYTSQVVFFIVLSCLISVSVNFS 240
Query: 241 TFLVIGKTSPVTYQVLGHLKTCLVLAFGYVLLHDPFSWRNILGILIAVIGMVSYSYFCTK 300
TFLVIGKTSPVTYQVLGHLKTCLVL FGYVLLHDPFSWRNILGILIAV+GMV YSYFCT
Sbjct: 241 TFLVIGKTSPVTYQVLGHLKTCLVLTFGYVLLHDPFSWRNILGILIAVVGMVLYSYFCTL 300
Query: 301 EAPPKPTEASPQLNQVKESESDPLISDSLSTAENGGNAGDDEALKVPMWSSKYSKA 356
E K E SPQ Q KE +S PLISDSLS ENGG DDE LKVPMWSSKYS+A
Sbjct: 301 EGQQKNAEVSPQ--QAKEGDSAPLISDSLSKVENGGGVVDDEPLKVPMWSSKYSRA 354
>Os02g0628200 Protein of unknown function DUF250 domain containing protein
Length = 341
Score = 361 bits (927), Expect = e-100, Method: Compositional matrix adjust.
Identities = 185/319 (57%), Positives = 224/319 (70%)
Query: 8 FQLGTVGAXXXXXXXXXXXXXCNKALMSSLGFNFATTLTSWHLLVTFCSLHVALCMKLFE 67
FQLG +G+ CNKAL+S+LGF FATTLTSWHL+VTFC+LHVA M+ FE
Sbjct: 5 FQLGVIGSLTLSVASSVSIVICNKALISTLGFPFATTLTSWHLMVTFCTLHVAQRMRFFE 64
Query: 68 HKPFDARTVMGFXXXXXXXXXXXXXXXXXXXXXFYQMTKLAIIPCTVILETLFFRKKFSR 127
K D +TV+ F FYQMTKLAIIP TV+LET+F +K+FS
Sbjct: 65 PKAIDGQTVILFGLLNGTSIGLLNLSLGFNSIGFYQMTKLAIIPFTVMLETIFLKKRFSE 124
Query: 128 NIQXXXXXXXXXXXXATVTDLQLNAVGSVLSLLAIITTCIAQIMTNTIQKKFKVSSTQLL 187
+I+ A+VTDL+LN +GSVLS LAI TTC+ QI+TNTIQK+ KVSSTQLL
Sbjct: 125 SIKFSLLILLLGVGIASVTDLKLNLLGSVLSGLAIATTCVGQILTNTIQKRLKVSSTQLL 184
Query: 188 YQSCPYQALTLFIVGPFLDGFLTNQNVFAFDYTSQVVFFIVLSCLISVSVNFSTFLVIGK 247
YQS PYQA LF GPF+D LT+++VFA YT+ VV FIVLSCLI+VSVNFSTFLVIG
Sbjct: 185 YQSAPYQAAILFATGPFVDQLLTSRSVFAHKYTAPVVGFIVLSCLIAVSVNFSTFLVIGT 244
Query: 248 TSPVTYQVLGHLKTCLVLAFGYVLLHDPFSWRNILGILIAVIGMVSYSYFCTKEAPPKPT 307
TSPVTYQVLGHLKTCLVL+FGY LLHDPF+ RNILGIL+A+ GM YSYF +E+ K
Sbjct: 245 TSPVTYQVLGHLKTCLVLSFGYTLLHDPFTMRNILGILVAIFGMALYSYFSVRESKKKSA 304
Query: 308 EASPQLNQVKESESDPLIS 326
++Q+ E E +PL++
Sbjct: 305 GDPLPVSQMPEKEVEPLLA 323
>Os10g0479700 Protein of unknown function DUF250 domain containing protein
Length = 370
Score = 338 bits (866), Expect = 5e-93, Method: Compositional matrix adjust.
Identities = 176/330 (53%), Positives = 223/330 (67%), Gaps = 11/330 (3%)
Query: 5 GEKFQLGTVGAXXXXXXXXXXXXXCNKALMSSLGFNFATTLTSWHLLVTFCSLHVALCMK 64
G +LG GA CNK L+S+LGF FATTLTSWHL+VTFC+L+VA ++
Sbjct: 7 GAASRLGVAGALGMSVTSSVAIVICNKYLISTLGFFFATTLTSWHLMVTFCTLYVAQRLR 66
Query: 65 LFEHKPFDARTVMGFXXXXXXXXXXXXXXXXXXXXXFYQMTKLAIIPCTVILETLFFRKK 124
FE KP DA+TV+ F FYQMTKLAIIP T++LET+F KK
Sbjct: 67 FFEAKPIDAQTVISFGLLNGISIGLLNLCLGFNSVGFYQMTKLAIIPFTMLLETIFLSKK 126
Query: 125 FSRNIQXXXXXXXXXXXXATVTDLQLNAVGSVLSLLAIITTCIAQIMTNTIQKKFKVSST 184
FSR+I+ A+VTDLQLN +GS++++L I TC++QI+TN IQ++ KVSST
Sbjct: 127 FSRSIKISLMVLLLGVGIASVTDLQLNLLGSIIAVLTIAATCVSQILTNQIQRRLKVSST 186
Query: 185 QLLYQSCPYQALTLFIVGPFLDGFLTNQNVFAFDYTSQVVFFIVLSCLISVSVNFSTFLV 244
QLLYQS PYQ+ L + GPF+D LTN++VFAF YT QVV FIVLSC I+V VNFSTFLV
Sbjct: 187 QLLYQSSPYQSAVLLVTGPFVDKLLTNRDVFAFTYTFQVVAFIVLSCSIAVCVNFSTFLV 246
Query: 245 IGKTSPVTYQVLGHLKTCLVLAFGYVLLHDPFSWRNILGILIAVIGMVSYSYFCTKEAPP 304
IG TSPVTYQVLGHLKTCL+L+FGYVLL DPF++RN+ GIL+A+ GM YS+F E+
Sbjct: 247 IGTTSPVTYQVLGHLKTCLILSFGYVLLRDPFTFRNVAGILVAIFGMGLYSFFSVSESRD 306
Query: 305 KP---------TEASPQLNQVKESESDPLI 325
K +S Q+ ++K+SE PL+
Sbjct: 307 KKLADGPSPPLPISSSQMAEMKDSE--PLL 334
>Os06g0506200 Protein of unknown function DUF250 domain containing protein
Length = 226
Score = 221 bits (563), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 115/217 (52%), Positives = 142/217 (65%)
Query: 8 FQLGTVGAXXXXXXXXXXXXXCNKALMSSLGFNFATTLTSWHLLVTFCSLHVALCMKLFE 67
FQLG +G+ CNKAL+S+LGF FATTLTSWHL++TFC+LHVA + FE
Sbjct: 7 FQLGVIGSLALSVASSVAIVICNKALISTLGFPFATTLTSWHLMMTFCTLHVAQRLHFFE 66
Query: 68 HKPFDARTVMGFXXXXXXXXXXXXXXXXXXXXXFYQMTKLAIIPCTVILETLFFRKKFSR 127
K D +TV+ F FYQMTKLAIIP TV+LET+F +K+FS
Sbjct: 67 PKAIDGQTVILFGLLNGTSIGLLNLSLGFNSIGFYQMTKLAIIPFTVLLETIFLKKRFSE 126
Query: 128 NIQXXXXXXXXXXXXATVTDLQLNAVGSVLSLLAIITTCIAQIMTNTIQKKFKVSSTQLL 187
+I+ A+VTDL+LN +GSVLS LAI TTC+ QI+TNTIQK+ KVSSTQLL
Sbjct: 127 SIKLSLLVLLLGVGIASVTDLKLNLLGSVLSGLAIATTCVGQILTNTIQKRLKVSSTQLL 186
Query: 188 YQSCPYQALTLFIVGPFLDGFLTNQNVFAFDYTSQVV 224
YQS PYQA LF GPF+D LTN++VFA YT+ V+
Sbjct: 187 YQSAPYQAAILFATGPFVDQLLTNRSVFAHKYTTPVL 223
>Os02g0614500 Protein of unknown function DUF250 domain containing protein
Length = 331
Score = 174 bits (442), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 108/297 (36%), Positives = 162/297 (54%), Gaps = 12/297 (4%)
Query: 30 NKALMSSLGFNFATTLTSWHLLVTFCSLHVALCMKLFEH-KP--FDARTVMGFXXXXXXX 86
NKALM++ GF+FATTLT H T + L MK H +P ++ F
Sbjct: 32 NKALMATHGFSFATTLTGLHFATTTL---MTLVMKWLGHIQPSYLPLPELVKFVFFANLS 88
Query: 87 XXXXXXXXXXXXXXFYQMTKLAIIPCTVILETLFFRKKFSRNIQXXXXXXXXXXXXATVT 146
FYQ+ KL IIP ILE LF + ++SRN + TVT
Sbjct: 89 IVGMNVSLMWNSVGFYQIAKLCIIPVLCILEILFDKVRYSRNTKLSIVLVLVGVAVCTVT 148
Query: 147 DLQLNAVGSVLSLLAIITTCIAQIMTNTIQKKFKVSSTQLLYQSCPYQALTLFIVGPFLD 206
D+ +N+ G + +++A+ +T + Q + +QKK+ + S LL + P QA +L I+GPF+D
Sbjct: 149 DVSVNSKGLLAAVIAVWSTALQQHYVHHLQKKYSLGSFNLLGHTAPAQAASLLILGPFVD 208
Query: 207 GFLTNQNVFAFDYTSQVVFFIVLSCLISVSVNFSTFLVIGKTSPVTYQVLGHLKTCLVLA 266
+LTN+ V F+YT+ V FFIVLSC I+V N S F+ IG+ + V++QVLGH+KT LVL
Sbjct: 209 FWLTNRRVDTFNYTTIVTFFIVLSCTIAVGTNLSQFICIGRFTAVSFQVLGHMKTILVLT 268
Query: 267 FGYVLL-HDPFSWRNILGILIAVIGMVSYSYFCTKEAPPKPTEASPQLNQVKESESD 322
G++ + ++ +LG+++AVIGM+ Y A KP Q+ V ++
Sbjct: 269 LGFLFFGKEGLNFHVVLGMMLAVIGMIWYG-----NASSKPGGKERQIYSVPSEKTQ 320
>Os05g0215800 Protein of unknown function DUF250 domain containing protein
Length = 335
Score = 168 bits (425), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 100/301 (33%), Positives = 163/301 (54%), Gaps = 8/301 (2%)
Query: 30 NKALMSSLGFNFATTLTSWHLLVTFCSLHVALCMKLFEHKPFDARTVMGFXXXXXXXXXX 89
NKALM++ GF+FATTLT H T V + + ++ F
Sbjct: 32 NKALMATHGFSFATTLTGLHFATTTLMTLVMKWLGYIQPSYLPVPELIKFVFFANLSIVG 91
Query: 90 XXXXXXXXXXXFYQMTKLAIIPCTVILETLFFRKKFSRNIQXXXXXXXXXXXXATVTDLQ 149
FYQ+ KL IIP LE LF + ++SR+ + TVTD+
Sbjct: 92 MNVSLMWNSVGFYQIAKLCIIPVLCFLEILFDKVRYSRDTKFSIMVVLVGVAVCTVTDVS 151
Query: 150 LNAVGSVLSLLAIITTCIAQIMTNTIQKKFKVSSTQLLYQSCPYQALTLFIVGPFLDGFL 209
+N+ G + +++A+ +T + Q + +Q+K+ + S LL + P QA +L ++GPF+D +L
Sbjct: 152 VNSQGLIAAIIAVWSTALQQHYVHHLQRKYSLGSFNLLGHTAPAQAASLLVLGPFVDFWL 211
Query: 210 TNQNVFAFDYTSQVVFFIVLSCLISVSVNFSTFLVIGKTSPVTYQVLGHLKTCLVLAFGY 269
TN+ V F+YT+ V FFI+LSC+I+V N S F+ IG+ + V++QVLGH+KT LVL G+
Sbjct: 212 TNKRVDTFNYTAIVTFFIILSCIIAVGTNLSQFICIGRFTAVSFQVLGHMKTVLVLTLGF 271
Query: 270 VLL-HDPFSWRNILGILIAVIGMVSYSYFCTKEAPPK------PTEASPQLNQV-KESES 321
+ + ++ +G+++AVIGM+ Y +K + P+E + + N + +SE
Sbjct: 272 LFFGKEGLNFHVAIGMILAVIGMIWYGNASSKPGGKERQVYSAPSEKTQKHNILSSQSEL 331
Query: 322 D 322
D
Sbjct: 332 D 332
>Os01g0823200 Conserved hypothetical protein
Length = 182
Score = 167 bits (423), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 89/163 (54%), Positives = 104/163 (63%)
Query: 11 GTVGAXXXXXXXXXXXXXCNKALMSSLGFNFATTLTSWHLLVTFCSLHVALCMKLFEHKP 70
GT A CNKALMS+LGF FATTLTSWHLLVTFCSLHVAL MKLFE+K
Sbjct: 8 GTAAALGLSVVSSVSIVVCNKALMSTLGFVFATTLTSWHLLVTFCSLHVALQMKLFENKD 67
Query: 71 FDARTVMGFXXXXXXXXXXXXXXXXXXXXXFYQMTKLAIIPCTVILETLFFRKKFSRNIQ 130
D +T++GF FYQ+TKLAIIPCTV LET+ FRK FSR IQ
Sbjct: 68 LDPKTIIGFGILNGISIGLLNLSLGFNSIGFYQVTKLAIIPCTVSLETILFRKTFSRRIQ 127
Query: 131 XXXXXXXXXXXXATVTDLQLNAVGSVLSLLAIITTCIAQIMTN 173
ATVTDLQLN +GS+LSL A++TTCI+QI+++
Sbjct: 128 MALAVLLFGVGVATVTDLQLNRLGSLLSLFAVLTTCISQIVSS 170
>Os07g0581000 Protein of unknown function DUF250 domain containing protein
Length = 345
Score = 165 bits (418), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 105/319 (32%), Positives = 166/319 (52%), Gaps = 12/319 (3%)
Query: 13 VGAXXXXXXXXXXXXXCNKALMSSLG--FNFATTLTSWHLLVT--FCSLHVALCMKLFEH 68
VGA NK LMSS G F+FATTLT +H VT + A + +H
Sbjct: 13 VGAWAMNVVSSVGIIMANKQLMSSSGYAFSFATTLTGFHFTVTALVGWISNATGYSVSKH 72
Query: 69 KPFDARTVMGFXXXXXXXXXXXXXXXXXXXXXFYQMTKLAIIPCTVILETLFFRKKFSRN 128
P ++ F FYQ++KL++IP ++E + K ++
Sbjct: 73 VPL--WELVWFSLVANTSITGMNLSLMLNSVGFYQISKLSMIPVVCLMEWVLNSKHYTTK 130
Query: 129 IQXXXXXXXXXXXXATVTDLQLNAVGSVLSLLAIITTCIAQIMTNTIQKKFKVSSTQLLY 188
+ TVTD+++NA G + + +A+ T + QI + QKK+ + S +LL
Sbjct: 131 VISAVVVVAAGVGICTVTDVEVNAKGFICACVAVFCTSLQQITIGSFQKKYNIGSFELLS 190
Query: 189 QSCPYQALTLFIVGPFLDGFLTNQNVFAFDYTSQVVFFIVLSCLISVSVNFSTFLVIGKT 248
++ P QA++L I+GPF D +L + + +++++ FFI+LSC ++V N S +L IG+
Sbjct: 191 KTAPIQAVSLIILGPFADYYLNGRWLLNYNFSTGATFFILLSCSLAVFCNMSQYLCIGRF 250
Query: 249 SPVTYQVLGHLKTCLVLAFGYVLLHDPFSWRNILGILIAVIGMVSYSYFCTKE---APPK 305
S ++QVLGH+KT VL G++L + +NILG+L+AV+GMV YS+ E + P
Sbjct: 251 SATSFQVLGHMKTVCVLILGWILFDSALTVKNILGMLLAVMGMVVYSWAVETEKKASAPI 310
Query: 306 PTEASPQLNQVKESESDPL 324
P S L+ +SE PL
Sbjct: 311 PRNKSDMLD---DSEDVPL 326
>Os12g0154600 Protein of unknown function DUF250 domain containing protein
Length = 333
Score = 164 bits (416), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 99/296 (33%), Positives = 158/296 (53%), Gaps = 4/296 (1%)
Query: 30 NKALMSSLGFNFATTLTSWHLLVTFCSLHVALCMKLFEHKPFDARTVMGFXXXXXXXXXX 89
NKALM++ GF+FATTLT H + T V + L + ++ F
Sbjct: 33 NKALMATHGFSFATTLTGLHFVTTTLMTIVFRWLGLSQPSHLPLPDLIKFVIFSNLSIVG 92
Query: 90 XXXXXXXXXXXFYQMTKLAIIPCTVILETLFFRKKFSRNIQXXXXXXXXXXXXATVTDLQ 149
FYQ+ KL +IP + +LE +F +SR+ + TVTD+
Sbjct: 93 MNVSLMWNSVGFYQIAKLCMIPASCLLEVVFDHVHYSRDTKLSIMVVLIGVAVCTVTDVS 152
Query: 150 LNAVGSVLSLLAIITTCIAQIMTNTIQKKFKVSSTQLLYQSCPYQALTLFIVGPFLDGFL 209
+NA G +++A+ +T + Q + +Q+K+ ++S LL + P QA +L +VGPF+D L
Sbjct: 153 VNAKGLAAAVIAVWSTALQQYYVHFLQRKYSLNSFNLLGHTAPAQAGSLLLVGPFVDFLL 212
Query: 210 TNQNVFAFDYTSQVVFFIVLSCLISVSVNFSTFLVIGKTSPVTYQVLGHLKTCLVLAFGY 269
T + V F +TS +FF+ LSC+I++ VN S F+ IG+ S V++QVLGH+KT LVL+ G+
Sbjct: 213 TGKRVDHFGFTSIALFFLTLSCVIAIGVNLSQFICIGRFSAVSFQVLGHMKTVLVLSLGF 272
Query: 270 VLL-HDPFSWRNILGILIAVIGMVSYSYFCTKEAPPKPTEASPQLNQVKESESDPL 324
+ + +++ +LG+++AV+GM+ Y A P E L E S L
Sbjct: 273 LFFGKEGLNFQVVLGMILAVVGMIWYG---NASAKPGGKERRSVLPVRSEKPSGAL 325
>Os12g0154000 Protein of unknown function DUF250 domain containing protein
Length = 334
Score = 159 bits (402), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 92/264 (34%), Positives = 151/264 (57%), Gaps = 1/264 (0%)
Query: 30 NKALMSSLGFNFATTLTSWHLLVTFCSLHVALCMKLFEHKPFDARTVMGFXXXXXXXXXX 89
NKALM++ GF+FATTLT H + T V + L + ++ F
Sbjct: 33 NKALMATHGFSFATTLTGLHFVTTTLMTIVFRWLGLSQPSHLPIPDLIKFVIFSNLSIVG 92
Query: 90 XXXXXXXXXXXFYQMTKLAIIPCTVILETLFFRKKFSRNIQXXXXXXXXXXXXATVTDLQ 149
FYQ+ KL +IP + +LE +F R +SR+ + TVTD+
Sbjct: 93 MNVSLMWNSVGFYQIAKLCMIPASCLLEVVFDRVHYSRDTKLSIMVVLIGVAVCTVTDVS 152
Query: 150 LNAVGSVLSLLAIITTCIAQIMTNTIQKKFKVSSTQLLYQSCPYQALTLFIVGPFLDGFL 209
+NA G +++A+ +T + Q + +Q+K+ ++S LL + P QA +L +VGPF+D L
Sbjct: 153 VNAKGLAAAVIAVWSTALQQYYVHFLQRKYSLNSFNLLGHTAPAQAGSLLLVGPFVDFLL 212
Query: 210 TNQNVFAFDYTSQVVFFIVLSCLISVSVNFSTFLVIGKTSPVTYQVLGHLKTCLVLAFGY 269
T + V F +TS +FF+ LSC+I++ VN S F+ IG+ S V++QVLGH+KT LVL+ G+
Sbjct: 213 TGKRVDHFGFTSIALFFLTLSCVIAIGVNLSQFICIGRFSAVSFQVLGHMKTVLVLSLGF 272
Query: 270 VLL-HDPFSWRNILGILIAVIGMV 292
+ + +++ +LG+++AV+GM+
Sbjct: 273 LFFGKEGLNFQVVLGMILAVVGMI 296
>Os04g0692000 Protein of unknown function DUF6, transmembrane domain containing
protein
Length = 350
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 69/310 (22%), Positives = 122/310 (39%), Gaps = 12/310 (3%)
Query: 30 NKALMSSLGFNFATTLTSWHLLVT----FCSLHVALCMKLFEHKPFDA-RTVMGFXXXXX 84
NK + L F F T++ H + + + ++HV L + +P D R +
Sbjct: 36 NKWIFQKLDFKFPLTVSCVHFICSSIGAYIAIHVLKAKPLIQVEPEDRWRRIFPMSFVFC 95
Query: 85 XXXXXXXXXXXXXXXXFYQMTKLAIIPCTVILETLFFRKKFSRNIQXXXXXXXXXXXXAT 144
F Q K TVIL+ L + K F I +
Sbjct: 96 INIVLGNVSLRYIPVSFMQTIKSFTPATTVILQWLVWSKHFEWRIWASLVPIVGGILLTS 155
Query: 145 VTDLQLNAVGSVLSLLAIITTCIAQIMTNTIQKKFKVSSTQLLYQSCPYQALTLFIVGPF 204
+T+L N G +++ + T I+ ++ +K S +Y P+ + L +
Sbjct: 156 ITELSFNMFGFCAAMVGCLATSTKTILAESLLHGYKFDSINTVYYMAPFATMILALPAVL 215
Query: 205 LDGFLTNQNVFAFDYTSQVVFFIVLSCLISVSVNFSTFLVIGKTSPVTYQVLGHLKTCLV 264
L+G + D + + I+ S +++ +NFS F VI T+ VT+ V G+LK +
Sbjct: 216 LEGGGVVTWFYTHDSIASALVIIIGSGVLAFCLNFSIFYVIHSTTAVTFNVAGNLKVAVA 275
Query: 265 LAFGYVLLHDPFSWRNILGILIAVIGMVSYSY---FCTKEAPPKPTEASPQLNQVKESES 321
+ +++ +P S N +G I ++G Y Y ++ P SP +Q S
Sbjct: 276 VLVSWLIFRNPISPMNAIGCAITLVGCTFYGYVRHLIPQQQAVAPGTGSPTTSQTNSPRS 335
Query: 322 D----PLISD 327
PL+ D
Sbjct: 336 RMEMLPLVGD 345
>Os08g0104900 Protein of unknown function DUF6, transmembrane domain containing
protein
Length = 337
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 71/303 (23%), Positives = 122/303 (40%), Gaps = 7/303 (2%)
Query: 30 NKALMSSLGFNFATTLTSWHLLVTFCSLHVA---LCMK-LFEHKPFDA-RTVMGFXXXXX 84
NK + L F F T++ H + + ++A L MK L E P D R +
Sbjct: 32 NKWIFQKLEFKFPLTVSCVHFICSSIGAYIAIKILKMKPLIEVAPEDRWRRIFPMSFVFC 91
Query: 85 XXXXXXXXXXXXXXXXFYQMTKLAIIPCTVILETLFFRKKFSRNIQXXXXXXXXXXXXAT 144
F Q K TVIL+ L +RK F I +
Sbjct: 92 INIVLGNVSLRYIPVSFMQTIKSFTPATTVILQWLVWRKYFEWRIWASLVPIVGGIMLTS 151
Query: 145 VTDLQLNAVGSVLSLLAIITTCIAQIMTNTIQKKFKVSSTQLLYQSCPYQALTLFIVGPF 204
+T+L N G +++ + T I+ ++ +K S +Y P+ + L +
Sbjct: 152 ITELSFNMFGFCAAMVGCLATSTKTILAESLLHGYKFDSINTVYYMAPFATMILSVPAIV 211
Query: 205 LDGFLTNQNVFAFDYTSQVVFFIVLSCLISVSVNFSTFLVIGKTSPVTYQVLGHLKTCLV 264
L+G ++ +D + I S +++ +NFS F VI T+ VT+ V G+LK +
Sbjct: 212 LEGSGVINWLYTYDSIVPALIIITTSGVLAFCLNFSIFYVIHSTTAVTFNVAGNLKVAVA 271
Query: 265 LAFGYVLLHDPFSWRNILGILIAVIGMVSYSYFCTKEAPPKPTEASPQLNQVKESESDPL 324
+ +++ +P S N +G I ++G Y Y + +SP+ + E PL
Sbjct: 272 VLVSWMIFRNPISAMNAVGCAITLVGCTFYGY-VRHLISQQSVNSSPRTPR-SRMEMLPL 329
Query: 325 ISD 327
+ D
Sbjct: 330 VGD 332
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.325 0.136 0.408
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 9,178,440
Number of extensions: 310011
Number of successful extensions: 1301
Number of sequences better than 1.0e-10: 14
Number of HSP's gapped: 1283
Number of HSP's successfully gapped: 14
Length of query: 356
Length of database: 17,035,801
Length adjustment: 102
Effective length of query: 254
Effective length of database: 11,709,973
Effective search space: 2974333142
Effective search space used: 2974333142
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 156 (64.7 bits)