Os05g0215800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF250 domain containing protein.
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Os05g0215800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein of unknown function DUF250 domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 49.9 | 0.332 | 7.41 | -0.141 | 0.0828 | -0.206 | -0.643 | -2.28 | -0.256 | 2.34 | 24.71 | 2569 | -- | -- |
| 53.65 | 0.341 | 7.46 | -0.748 | 0.102 | -0.329 | -0.512 | -- | -0.262 | 1.21 | 29.9 | 3303 | -- | -- |
| 51.29 | 0.334 | 7.42 | -0.174 | 0.0858 | -0.212 | -- | -2.16 | -0.261 | 2.5 | 25 | 2608 | -- | -- |
| 53.87 | 0.342 | 7.46 | -0.786 | 0.0983 | -0.386 | -- | -- | -0.297 | 1.64 | 30.3 | 3384 | -- | -- |
| 51.68 | 0.335 | 7.42 | -0.198 | -- | -0.248 | -- | -2.13 | -0.274 | -- | 24.99 | 2602 | -- | -- |
| 57.59 | 0.356 | 7.47 | -0.689 | 0.132 | -- | -0.408 | -- | -0.358 | 2.52 | -- | -- | -- | -- |
| 58.18 | 0.357 | 7.47 | -0.678 | 0.131 | -- | -- | -- | -0.355 | 2.25 | -- | -- | -- | -- |
| 53.51 | 0.341 | 7.52 | -1.14 | -- | -0.479 | -- | -- | -0.596 | -- | 29.12 | 47520 | -- | -- |
| 67.64 | 0.385 | 7.45 | -- | 0.183 | -0.321 | -- | -- | -0.252 | 2.69 | 30.3 | 3384 | -- | -- |
| 59.2 | 0.36 | 7.47 | -0.673 | -- | -- | -- | -- | -0.352 | -- | -- | -- | -- | -- |
| 70.3 | 0.392 | 7.45 | -- | 0.118 | -- | -- | -- | -0.28 | 2.13 | -- | -- | -- | -- |
| 69.23 | 0.388 | 7.44 | -- | -- | -0.246 | -- | -- | -0.231 | -- | 30.32 | 3448 | -- | -- |
| 71.13 | 0.394 | 7.45 | -- | -- | -- | -- | -- | -0.278 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 47.38 | temperature | 10 | 720 | > th | dose dependent | rect. | 3 | 12 |
| 7 | 47.93 | temperature | 10 | 720 | > th | dose dependent | rect. | 21 | 19 |
| 21 | 48.35 | wind | 1 | 14400 | < th | dose independent | rect. | 10 | 3 |
| 32 | 48.50 | wind | 1 | 14400 | > th | dose independent | rect. | 11 | 2 |
| 35 | 48.52 | wind | 1 | 14400 | < th | dose dependent | rect. | 10 | 3 |
| 41 | 48.72 | temperature | 15 | 270 | > th | dose dependent | rect. | 3 | 20 |
| 66 | 48.92 | temperature | 30 | 14400 | < th | dose independent | rect. | 2 | 7 |
| 67 | 48.92 | temperature | 30 | 14400 | < th | dose independent | rect. | 21 | 12 |
| 69 | 48.93 | temperature | 30 | 14400 | < th | dose independent | rect. | 8 | 1 |
| 72 | 48.94 | radiation | 10 | 14400 | > th | dose independent | rect. | 6 | 1 |
| 80 | 48.97 | temperature | 30 | 14400 | > th | dose independent | rect. | 8 | 1 |
| 110 | 48.99 | temperature | 10 | 720 | > th | dose dependent | sin | 4 | NA |
| 112 | 49.00 | temperature | 30 | 720 | < th | dose dependent | rect. | 6 | 11 |
| 114 | 49.00 | temperature | 30 | 720 | < th | dose dependent | rect. | 5 | 13 |
| 115 | 49.01 | atmosphere | 1000 | 270 | > th | dose independent | rect. | 7 | 20 |
| 126 | 49.05 | wind | 1 | 43200 | < th | dose independent | rect. | 13 | 12 |
| 128 | 49.06 | temperature | 30 | 720 | < th | dose dependent | sin | 1 | NA |
| 132 | 49.07 | wind | 1 | 43200 | > th | dose independent | rect. | 13 | 12 |
| 136 | 49.09 | wind | 1 | 43200 | > th | dose independent | rect. | 15 | 10 |
| 142 | 49.12 | temperature | 30 | 14400 | > th | dose dependent | rect. | 8 | 1 |
| 160 | 49.13 | temperature | 20 | 720 | > th | dose dependent | sin | 5 | NA |
| 166 | 49.17 | wind | 1 | 43200 | < th | dose independent | rect. | 15 | 9 |
| 179 | 49.21 | radiation | 10 | 14400 | < th | dose dependent | rect. | 9 | 1 |
| 185 | 49.25 | radiation | 1 | 4320 | < th | dose independent | rect. | 16 | 14 |
| 209 | 49.31 | wind | 1 | 43200 | < th | dose dependent | rect. | 12 | 12 |
| 214 | 49.34 | radiation | 1 | 4320 | > th | dose independent | rect. | 16 | 14 |
| 227 | 49.39 | wind | 1 | 14400 | < th | dose dependent | rect. | 8 | 16 |
| 238 | 49.42 | temperature | 20 | 720 | > th | dose dependent | rect. | 4 | 5 |
| 253 | 49.46 | temperature | 30 | 720 | < th | dose dependent | rect. | 1 | 17 |
| 266 | 49.49 | wind | 3 | 43200 | < th | dose dependent | rect. | 23 | 2 |
| 272 | 49.52 | temperature | 25 | 4320 | > th | dose independent | rect. | 22 | 4 |
| 279 | 49.53 | radiation | 40 | 14400 | > th | dose dependent | rect. | 12 | 1 |
| 282 | 49.54 | temperature | 25 | 4320 | > th | dose independent | rect. | 23 | 1 |
| 284 | 49.54 | temperature | 10 | 4320 | > th | dose dependent | rect. | 23 | 2 |
| 296 | 49.57 | temperature | 30 | 4320 | < th | dose dependent | rect. | 23 | 2 |
| 298 | 49.57 | radiation | 1 | 4320 | < th | dose dependent | rect. | 15 | 15 |
| 303 | 49.58 | temperature | 10 | 720 | > th | dose dependent | rect. | 12 | 21 |
| 333 | 49.64 | temperature | 25 | 4320 | < th | dose independent | rect. | 23 | 2 |
| 338 | 49.65 | temperature | 25 | 4320 | < th | dose independent | rect. | 20 | 7 |
| 342 | 49.65 | temperature | 10 | 4320 | > th | dose dependent | rect. | 23 | 11 |
| 348 | 49.67 | temperature | 25 | 4320 | < th | dose independent | rect. | 22 | 4 |
| 350 | 49.67 | temperature | 30 | 4320 | < th | dose dependent | rect. | 23 | 11 |
| 378 | 49.70 | temperature | 30 | 720 | < th | dose dependent | rect. | 6 | 20 |
| 382 | 49.71 | humidity | 70 | 43200 | > th | dose dependent | rect. | 21 | 1 |
| 384 | 49.71 | temperature | 10 | 720 | > th | dose dependent | rect. | 3 | 6 |
| 396 | 49.72 | radiation | 1 | 4320 | < th | dose independent | rect. | 17 | 4 |
| 409 | 49.73 | radiation | 1 | 4320 | < th | dose independent | rect. | 17 | 2 |
| 419 | 49.73 | radiation | 1 | 4320 | < th | dose dependent | rect. | 17 | 6 |
| 432 | 49.74 | temperature | 10 | 4320 | > th | dose dependent | rect. | 6 | 1 |
| 458 | 49.76 | radiation | 1 | 4320 | < th | dose dependent | rect. | 17 | 2 |
| 470 | 49.77 | temperature | 30 | 4320 | < th | dose dependent | rect. | 6 | 1 |
| 482 | 49.78 | temperature | 10 | 4320 | > th | dose dependent | sin | 8 | NA |
| 496 | 49.79 | radiation | 1 | 4320 | > th | dose independent | rect. | 17 | 2 |
| 507 | 49.79 | temperature | 25 | 720 | > th | dose independent | rect. | 23 | 16 |
| 544 | 49.82 | temperature | 30 | 4320 | < th | dose dependent | sin | 9 | NA |
| 572 | 49.84 | wind | 1 | 14400 | < th | dose independent | rect. | 8 | 16 |
| 687 | 49.91 | temperature | 25 | 720 | > th | dose independent | sin | 5 | NA |
| 688 | 49.91 | radiation | 10 | 4320 | > th | dose independent | rect. | 15 | 1 |
| 706 | 49.92 | temperature | 30 | 720 | < th | dose independent | rect. | 7 | 5 |
| 740 | 49.94 | temperature | 25 | 4320 | < th | dose independent | sin | 11 | NA |
| 789 | 49.96 | temperature | 25 | 720 | < th | dose independent | rect. | 6 | 9 |
| 806 | 49.97 | temperature | 25 | 720 | < th | dose independent | rect. | 6 | 11 |
| 872 | 50.00 | wind | 1 | 43200 | > th | dose independent | sin | 17 | NA |
| 894 | 50.00 | temperature | 10 | 1440 | > th | dose dependent | rect. | 9 | 17 |
| 919 | 50.01 | temperature | 10 | 1440 | > th | dose dependent | rect. | 11 | 15 |
| 992 | 50.05 | temperature | 25 | 720 | > th | dose independent | rect. | 2 | 13 |