Os12g0154600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF250 domain containing protein.
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Os12g0154600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein of unknown function DUF250 domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 45.25 | 0.316 | 8.44 | -1.01 | 0.746 | 1.21 | -0.228 | -3.15 | -0.494 | 7.89 | 10.29 | 663 | -- | -- |
| 51.4 | 0.334 | 8.37 | -0.479 | 0.785 | 1.2 | 0.428 | -- | -0.343 | 7.71 | 3.325 | 588 | -- | -- |
| 45.37 | 0.314 | 8.43 | -0.98 | 0.75 | 1.22 | -- | -2.97 | -0.486 | 7.88 | 9.817 | 650 | -- | -- |
| 51.98 | 0.336 | 8.37 | -0.455 | 0.78 | 1.19 | -- | -- | -0.349 | 7.58 | 2.988 | 573 | -- | -- |
| 59.23 | 0.358 | 8.47 | -1.07 | -- | 0.961 | -- | -2.75 | -0.496 | -- | 4.106 | 1407 | -- | -- |
| 68.51 | 0.388 | 8.34 | -0.181 | 0.469 | -- | 0.297 | -- | -0.168 | 7.91 | -- | -- | -- | -- |
| 68.76 | 0.388 | 8.34 | -0.174 | 0.47 | -- | -- | -- | -0.169 | 7.79 | -- | -- | -- | -- |
| 65.82 | 0.378 | 8.39 | -0.589 | -- | 0.906 | -- | -- | -0.341 | -- | -0.5003 | 4375 | -- | -- |
| 56.75 | 0.351 | 8.35 | -- | 0.73 | 1 | -- | -- | -0.273 | 7.38 | 7.932 | 488 | -- | -- |
| 80.71 | 0.42 | 8.35 | -0.168 | -- | -- | -- | -- | -0.162 | -- | -- | -- | -- | -- |
| 69.55 | 0.39 | 8.33 | -- | 0.469 | -- | -- | -- | -0.15 | 7.82 | -- | -- | -- | -- |
| 70.62 | 0.391 | 8.37 | -- | -- | 0.737 | -- | -- | -0.254 | -- | 13.68 | 1424 | -- | -- |
| 81.46 | 0.421 | 8.34 | -- | -- | -- | -- | -- | -0.144 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 44.00 | temperature | 15 | 720 | > th | dose dependent | rect. | 19 | 22 |
| 4 | 44.19 | temperature | 10 | 720 | > th | dose dependent | rect. | 3 | 21 |
| 5 | 44.40 | temperature | 10 | 720 | > th | dose dependent | rect. | 1 | 23 |
| 10 | 44.57 | temperature | 10 | 720 | > th | dose dependent | rect. | 10 | 23 |
| 30 | 45.11 | temperature | 10 | 720 | > th | dose dependent | rect. | 12 | 23 |
| 51 | 45.37 | temperature | 10 | 720 | > th | dose dependent | no | NA | NA |
| 54 | 45.39 | temperature | 15 | 720 | > th | dose dependent | rect. | 23 | 23 |
| 61 | 45.46 | temperature | 30 | 720 | < th | dose dependent | rect. | 22 | 21 |
| 104 | 46.00 | temperature | 15 | 720 | > th | dose dependent | rect. | 14 | 23 |
| 121 | 46.14 | temperature | 25 | 1440 | < th | dose dependent | rect. | 21 | 2 |
| 122 | 46.15 | temperature | 25 | 1440 | < th | dose dependent | rect. | 19 | 5 |
| 137 | 46.25 | temperature | 30 | 720 | < th | dose dependent | rect. | 17 | 23 |
| 142 | 46.28 | temperature | 30 | 720 | < th | dose dependent | rect. | 15 | 23 |
| 154 | 46.40 | temperature | 30 | 720 | < th | dose dependent | no | NA | NA |
| 158 | 46.40 | temperature | 30 | 720 | < th | dose dependent | rect. | 13 | 23 |
| 196 | 46.56 | temperature | 30 | 720 | < th | dose dependent | rect. | 6 | 23 |
| 199 | 46.58 | temperature | 10 | 1440 | > th | dose dependent | rect. | 17 | 7 |
| 218 | 46.66 | temperature | 25 | 1440 | < th | dose dependent | sin | 13 | NA |
| 220 | 46.66 | temperature | 10 | 1440 | > th | dose dependent | rect. | 17 | 9 |
| 233 | 46.68 | temperature | 30 | 720 | < th | dose dependent | rect. | 4 | 23 |
| 248 | 46.72 | temperature | 10 | 1440 | > th | dose dependent | rect. | 16 | 13 |
| 284 | 46.78 | temperature | 10 | 1440 | > th | dose dependent | sin | 14 | NA |
| 322 | 46.83 | temperature | 25 | 1440 | < th | dose dependent | rect. | 17 | 18 |
| 332 | 46.86 | radiation | 30 | 4320 | < th | dose independent | rect. | 16 | 16 |
| 352 | 46.87 | temperature | 15 | 720 | > th | dose dependent | rect. | 1 | 16 |
| 411 | 46.95 | temperature | 15 | 720 | > th | dose dependent | rect. | 3 | 14 |
| 708 | 47.20 | temperature | 10 | 1440 | > th | dose dependent | rect. | 18 | 1 |
| 927 | 47.34 | wind | 9 | 43200 | > th | dose dependent | rect. | 18 | 11 |
| 941 | 47.35 | wind | 9 | 43200 | > th | dose dependent | rect. | 18 | 6 |