Os10g0479700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF250 domain containing protein.
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Os10g0479700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein of unknown function DUF250 domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = atmosphere,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 128.7 | 0.533 | 8.01 | -1.68 | 2.4 | 0.0208 | 1.35 | -4.35 | 0.231 | 4.64 | 1003 | 8033 | -- | -- |
| 140.81 | 0.553 | 7.97 | -1.39 | 2.37 | -0.667 | 1.61 | -- | 0.188 | 4.65 | 1001 | 10445 | -- | -- |
| 133.44 | 0.538 | 8.02 | -1.71 | 2.4 | 0.0926 | -- | -4.8 | 0.231 | 4.61 | 1003 | 8641 | -- | -- |
| 145.33 | 0.561 | 7.99 | -1.47 | 2.39 | -0.683 | -- | -- | 0.175 | 4.61 | 1001 | 10637 | -- | -- |
| 439 | 0.976 | 8.05 | -1.56 | -- | -0.0427 | -- | -4.82 | 0.271 | -- | 1002 | 9001 | -- | -- |
| 150.13 | 0.574 | 7.97 | -1.58 | 2.4 | -- | 1.37 | -- | 0.244 | 4.64 | -- | -- | -- | -- |
| 155.08 | 0.583 | 7.97 | -1.58 | 2.4 | -- | -- | -- | 0.237 | 4.6 | -- | -- | -- | -- |
| 450.16 | 0.988 | 8 | -1.38 | -- | -0.85 | -- | -- | 0.241 | -- | 1000 | 9294 | -- | -- |
| 199.59 | 0.658 | 7.95 | -- | 2.37 | -0.89 | -- | -- | 0.315 | 4.6 | 1001 | 11260 | -- | -- |
| 462.75 | 1.01 | 7.99 | -1.49 | -- | -- | -- | -- | 0.3 | -- | -- | -- | -- | -- |
| 221.24 | 0.696 | 7.93 | -- | 2.37 | -- | -- | -- | 0.413 | 4.62 | -- | -- | -- | -- |
| 497.2 | 1.04 | 7.98 | -- | -- | -0.973 | -- | -- | 0.348 | -- | 1001 | 11947 | -- | -- |
| 521.48 | 1.07 | 7.96 | -- | -- | -- | -- | -- | 0.466 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 125.97 | atmosphere | 1000 | 10 | > th | dose independent | rect. | 4 | 18 |
| 9 | 129.62 | wind | 1 | 43200 | < th | dose dependent | rect. | 2 | 1 |
| 10 | 129.78 | wind | 7 | 43200 | < th | dose dependent | rect. | 13 | 2 |
| 11 | 129.90 | wind | 5 | 43200 | > th | dose independent | rect. | 14 | 1 |
| 12 | 129.93 | wind | 5 | 43200 | < th | dose independent | rect. | 14 | 1 |
| 16 | 130.19 | atmosphere | 1005 | 4320 | < th | dose independent | rect. | 7 | 4 |
| 22 | 130.33 | wind | 1 | 43200 | > th | dose dependent | rect. | 13 | 2 |
| 25 | 130.42 | atmosphere | 1005 | 4320 | > th | dose independent | rect. | 7 | 4 |
| 30 | 130.51 | atmosphere | 1005 | 4320 | < th | dose independent | rect. | 9 | 2 |
| 75 | 131.08 | atmosphere | 1005 | 4320 | < th | dose independent | rect. | 20 | 15 |
| 102 | 131.21 | atmosphere | 1000 | 270 | > th | dose independent | rect. | 10 | 11 |
| 109 | 131.23 | atmosphere | 1005 | 4320 | > th | dose independent | rect. | 20 | 15 |
| 149 | 131.39 | atmosphere | 1005 | 4320 | < th | dose independent | sin | 5 | NA |
| 155 | 131.40 | atmosphere | 1005 | 4320 | < th | dose dependent | rect. | 15 | 1 |
| 173 | 131.44 | atmosphere | 1005 | 4320 | < th | dose dependent | rect. | 13 | 3 |
| 194 | 131.50 | atmosphere | 995 | 10 | > th | dose dependent | rect. | 4 | 18 |
| 201 | 131.52 | atmosphere | 1005 | 4320 | < th | dose dependent | rect. | 23 | 17 |
| 207 | 131.54 | atmosphere | 1005 | 14400 | > th | dose independent | rect. | 5 | 1 |
| 272 | 131.65 | atmosphere | 1005 | 4320 | > th | dose independent | sin | 6 | NA |
| 305 | 131.69 | atmosphere | 1005 | 4320 | < th | dose dependent | sin | 4 | NA |
| 355 | 131.76 | atmosphere | 1005 | 14400 | < th | dose independent | rect. | 5 | 1 |
| 363 | 131.76 | atmosphere | 1005 | 4320 | < th | dose dependent | rect. | 12 | 22 |
| 372 | 131.77 | atmosphere | 1005 | 4320 | < th | dose dependent | rect. | 12 | 20 |
| 403 | 131.80 | atmosphere | 1005 | 4320 | < th | dose dependent | no | NA | NA |
| 415 | 131.80 | atmosphere | 1005 | 4320 | < th | dose dependent | rect. | 4 | 23 |
| 416 | 131.80 | atmosphere | 1005 | 4320 | < th | dose dependent | rect. | 6 | 23 |
| 443 | 131.82 | atmosphere | 1005 | 4320 | < th | dose dependent | rect. | 23 | 11 |
| 487 | 131.84 | atmosphere | 1005 | 4320 | < th | dose dependent | rect. | 15 | 23 |
| 557 | 131.89 | atmosphere | 1005 | 4320 | < th | dose independent | rect. | 5 | 20 |
| 698 | 131.98 | humidity | 70 | 30 | > th | dose dependent | rect. | 4 | 18 |
| 710 | 131.99 | atmosphere | 1005 | 4320 | < th | dose dependent | rect. | 4 | 1 |
| 737 | 132.01 | temperature | 20 | 10 | > th | dose independent | rect. | 4 | 18 |
| 747 | 132.02 | atmosphere | 1005 | 4320 | < th | dose independent | no | NA | NA |
| 820 | 132.08 | atmosphere | 1005 | 4320 | < th | dose independent | rect. | 23 | 23 |
| 839 | 132.10 | atmosphere | 1000 | 4320 | > th | dose independent | rect. | 15 | 1 |
| 840 | 132.10 | atmosphere | 1000 | 4320 | < th | dose independent | rect. | 15 | 1 |
| 845 | 132.10 | atmosphere | 1005 | 4320 | < th | dose dependent | rect. | 7 | 2 |
| 963 | 132.24 | wind | 5 | 43200 | < th | dose independent | rect. | 13 | 6 |
| 965 | 132.24 | atmosphere | 1005 | 4320 | > th | dose independent | rect. | 14 | 21 |
| 973 | 132.25 | atmosphere | 1005 | 4320 | > th | dose independent | rect. | 5 | 20 |
| 977 | 132.26 | atmosphere | 995 | 14400 | > th | dose independent | sin | 4 | NA |
| 985 | 132.27 | atmosphere | 995 | 14400 | > th | dose independent | rect. | 21 | 21 |
| 986 | 132.27 | atmosphere | 995 | 14400 | < th | dose independent | rect. | 21 | 21 |