Os12g0154000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF250 domain containing protein.
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Os12g0154000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein of unknown function DUF250 domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 13.34 | 0.172 | 10.6 | 0.732 | 0.408 | -0.516 | 0.127 | 1.34 | 0.135 | 6.15 | 24.37 | 4615 | -- | -- |
| 13.44 | 0.171 | 10.6 | 0.567 | 0.428 | -0.501 | 0.149 | -- | 0.218 | 6.15 | 18.36 | 11576 | -- | -- |
| 13.38 | 0.17 | 10.6 | 0.731 | 0.41 | -0.515 | -- | 1.33 | 0.135 | 6.15 | 24.29 | 4610 | -- | -- |
| 13.48 | 0.171 | 10.6 | 0.572 | 0.428 | -0.505 | -- | -- | 0.218 | 6.17 | 18.04 | 11631 | -- | -- |
| 20.71 | 0.213 | 10.7 | 0.413 | -- | -0.606 | -- | 0.788 | 0.0844 | -- | 25.3 | 4840 | -- | -- |
| 18.94 | 0.204 | 10.7 | 0.243 | 0.417 | -- | 0.13 | -- | 0.0227 | 6.29 | -- | -- | -- | -- |
| 18.98 | 0.204 | 10.7 | 0.244 | 0.418 | -- | -- | -- | 0.0222 | 6.28 | -- | -- | -- | -- |
| 20.97 | 0.214 | 10.7 | 0.328 | -- | -0.547 | -- | -- | 0.0624 | -- | 25.3 | 4840 | -- | -- |
| 17.68 | 0.196 | 10.7 | -- | 0.412 | -0.274 | -- | -- | 0.0448 | 5.95 | 26.27 | 7375 | -- | -- |
| 28.04 | 0.247 | 10.7 | 0.256 | -- | -- | -- | -- | 0.0313 | -- | -- | -- | -- | -- |
| 20.55 | 0.212 | 10.7 | -- | 0.421 | -- | -- | -- | -0.00497 | 6.24 | -- | -- | -- | -- |
| 23.75 | 0.228 | 10.7 | -- | -- | -0.5 | -- | -- | 0.0241 | -- | 25.3 | 4840 | -- | -- |
| 29.76 | 0.255 | 10.7 | -- | -- | -- | -- | -- | 0.00296 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 12.95 | temperature | 20 | 720 | > th | dose dependent | rect. | 23 | 12 |
| 4 | 13.06 | temperature | 25 | 14400 | > th | dose independent | rect. | 17 | 1 |
| 5 | 13.08 | temperature | 25 | 14400 | < th | dose independent | rect. | 17 | 1 |
| 11 | 13.14 | temperature | 20 | 14400 | > th | dose dependent | rect. | 17 | 1 |
| 24 | 13.24 | temperature | 20 | 720 | > th | dose dependent | sin | 7 | NA |
| 52 | 13.30 | temperature | 10 | 720 | > th | dose dependent | rect. | 23 | 12 |
| 96 | 13.37 | temperature | 20 | 14400 | > th | dose independent | rect. | 19 | 6 |
| 109 | 13.38 | temperature | 25 | 14400 | < th | dose independent | rect. | 6 | 14 |
| 125 | 13.39 | temperature | 25 | 14400 | > th | dose independent | rect. | 6 | 14 |
| 130 | 13.39 | temperature | 10 | 720 | > th | dose dependent | rect. | 1 | 10 |
| 136 | 13.40 | temperature | 20 | 14400 | < th | dose independent | rect. | 19 | 6 |
| 139 | 13.40 | temperature | 25 | 14400 | < th | dose independent | rect. | 10 | 10 |
| 141 | 13.40 | temperature | 25 | 14400 | > th | dose independent | rect. | 10 | 11 |
| 157 | 13.41 | temperature | 25 | 14400 | < th | dose independent | sin | 21 | NA |
| 183 | 13.41 | temperature | 30 | 14400 | < th | dose dependent | rect. | 17 | 1 |
| 212 | 13.42 | temperature | 20 | 14400 | > th | dose dependent | sin | 17 | NA |
| 226 | 13.43 | temperature | 25 | 14400 | > th | dose independent | sin | 20 | NA |
| 258 | 13.43 | temperature | 20 | 14400 | > th | dose dependent | rect. | 7 | 13 |
| 342 | 13.45 | temperature | 20 | 720 | > th | dose dependent | rect. | 7 | 2 |
| 345 | 13.45 | temperature | 15 | 720 | > th | dose dependent | rect. | 6 | 5 |
| 407 | 13.46 | temperature | 20 | 14400 | > th | dose dependent | rect. | 13 | 19 |
| 418 | 13.47 | temperature | 20 | 14400 | < th | dose independent | rect. | 20 | 3 |
| 571 | 13.49 | temperature | 20 | 14400 | > th | dose dependent | no | NA | NA |
| 608 | 13.50 | temperature | 20 | 14400 | < th | dose independent | rect. | 21 | 1 |
| 632 | 13.50 | temperature | 20 | 14400 | > th | dose dependent | rect. | 7 | 1 |
| 637 | 13.50 | temperature | 25 | 4320 | > th | dose dependent | rect. | 7 | 8 |
| 678 | 13.51 | temperature | 25 | 4320 | > th | dose dependent | rect. | 11 | 1 |
| 691 | 13.51 | temperature | 25 | 4320 | > th | dose dependent | rect. | 24 | 15 |
| 780 | 13.53 | temperature | 25 | 4320 | > th | dose dependent | rect. | 9 | 5 |
| 806 | 13.54 | temperature | 25 | 14400 | < th | dose independent | rect. | 10 | 1 |
| 860 | 13.55 | temperature | 20 | 14400 | > th | dose independent | sin | 15 | NA |
| 863 | 13.55 | temperature | 25 | 14400 | > th | dose independent | rect. | 10 | 1 |