Os05g0168700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF250 domain containing protein.
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Os05g0168700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein of unknown function DUF250 domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 24.44 | 0.232 | 11.5 | 0.52 | 0.732 | 0.0915 | 0.177 | 2.2 | 0.361 | 1.55 | 41.87 | 2641 | -- | -- |
| 27.73 | 0.247 | 11.5 | 0.311 | 0.7 | -0.333 | 0.327 | -- | 0.326 | 1.64 | 40 | 11379 | -- | -- |
| 24.29 | 0.23 | 11.5 | 0.517 | 0.702 | 0.107 | -- | 2.44 | 0.359 | 1.44 | 43.41 | 2717 | -- | -- |
| 28.01 | 0.248 | 11.5 | 0.3 | 0.697 | -0.317 | -- | -- | 0.324 | 1.66 | 37.88 | 47520 | -- | -- |
| 55.08 | 0.348 | 11.5 | 0.296 | -- | -0.92 | -- | 0.114 | 0.326 | -- | 43.41 | 2717 | -- | -- |
| 28.98 | 0.252 | 11.5 | 0.323 | 0.754 | -- | 0.294 | -- | 0.331 | 1.54 | -- | -- | -- | -- |
| 29.32 | 0.254 | 11.5 | 0.313 | 0.754 | -- | -- | -- | 0.33 | 1.55 | -- | -- | -- | -- |
| 53.73 | 0.343 | 11.5 | 0.303 | -- | -0.824 | -- | -- | 0.327 | -- | 37.88 | 47520 | -- | -- |
| 28.94 | 0.251 | 11.5 | -- | 0.751 | -0.358 | -- | -- | 0.26 | 1.55 | 38.67 | 47520 | -- | -- |
| 64.15 | 0.374 | 11.5 | 0.343 | -- | -- | -- | -- | 0.346 | -- | -- | -- | -- | -- |
| 31.9 | 0.264 | 11.5 | -- | 0.76 | -- | -- | -- | 0.295 | 1.57 | -- | -- | -- | -- |
| 56.14 | 0.35 | 11.5 | -- | -- | -0.849 | -- | -- | 0.293 | -- | 37.88 | 47520 | -- | -- |
| 67.25 | 0.383 | 11.5 | -- | -- | -- | -- | -- | 0.308 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 23.93 | temperature | 25.0 | 270 | < th | dose independent | rect. | 1 | 5 |
| 2 | 24.11 | radiation | 40.0 | 1440 | > th | dose independent | rect. | 14 | 19 |
| 3 | 24.12 | atmosphere | 1005.0 | 14400 | < th | dose independent | rect. | 16 | 1 |
| 4 | 24.15 | atmosphere | 1005.0 | 14400 | > th | dose independent | rect. | 16 | 1 |
| 6 | 24.16 | radiation | 40.0 | 1440 | > th | dose dependent | sin | 12 | NA |
| 10 | 24.24 | radiation | 40.0 | 1440 | > th | dose dependent | rect. | 14 | 19 |
| 12 | 24.31 | atmosphere | 1005.0 | 14400 | < th | dose independent | rect. | 13 | 5 |
| 13 | 24.31 | humidity | 50.0 | 90 | > th | dose dependent | rect. | 3 | 15 |
| 17 | 24.34 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 17 | 1 |
| 18 | 24.34 | radiation | 40.0 | 1440 | < th | dose independent | rect. | 14 | 19 |
| 19 | 24.35 | radiation | 40.0 | 1440 | > th | dose independent | rect. | 8 | 1 |
| 41 | 24.40 | humidity | 50.0 | 10 | > th | dose dependent | rect. | 4 | 14 |
| 42 | 24.40 | radiation | 40.0 | 1440 | > th | dose dependent | rect. | 13 | 22 |
| 46 | 24.45 | atmosphere | 1005.0 | 14400 | > th | dose independent | rect. | 12 | 6 |
| 50 | 24.47 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 17 | 1 |
| 55 | 24.47 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 17 | 1 |
| 79 | 24.60 | atmosphere | 1005.0 | 14400 | > th | dose independent | rect. | 13 | 1 |
| 96 | 24.64 | radiation | 1.0 | 10 | > th | dose dependent | rect. | 13 | 23 |
| 97 | 24.65 | temperature | 25.0 | 270 | < th | dose independent | rect. | 3 | 2 |
| 114 | 24.67 | radiation | 30.0 | 90 | < th | dose dependent | rect. | 3 | 15 |
| 115 | 24.68 | radiation | 40.0 | 1440 | < th | dose independent | rect. | 8 | 1 |
| 127 | 24.69 | wind | 9.0 | 270 | < th | dose dependent | rect. | 6 | 19 |
| 132 | 24.71 | radiation | 40.0 | 1440 | < th | dose independent | rect. | 24 | 9 |
| 138 | 24.71 | radiation | 40.0 | 1440 | < th | dose independent | rect. | 15 | 17 |
| 139 | 24.71 | wind | 5.0 | 90 | < th | dose independent | rect. | 8 | 19 |
| 140 | 24.71 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 17 | 1 |
| 153 | 24.73 | radiation | 10.0 | 270 | < th | dose dependent | rect. | 1 | 14 |
| 168 | 24.76 | wind | 9.0 | 43200 | > th | dose independent | rect. | 10 | 1 |
| 181 | 24.77 | radiation | 10.0 | 270 | < th | dose dependent | rect. | 1 | 16 |
| 191 | 24.80 | radiation | 1.0 | 10 | > th | dose dependent | rect. | 6 | 6 |
| 213 | 24.83 | radiation | 1.0 | 10 | > th | dose dependent | rect. | 15 | 21 |
| 215 | 24.84 | wind | 9.0 | 43200 | < th | dose independent | rect. | 10 | 1 |
| 219 | 24.84 | wind | 5.0 | 270 | < th | dose independent | rect. | 6 | 19 |
| 220 | 24.85 | atmosphere | 1005.0 | 14400 | > th | dose independent | sin | 19 | NA |
| 228 | 24.85 | wind | 5.0 | 43200 | < th | dose dependent | rect. | 24 | 4 |
| 230 | 24.85 | radiation | 30.0 | 90 | < th | dose dependent | rect. | 3 | 12 |
| 234 | 24.86 | wind | 1.0 | 43200 | > th | dose dependent | rect. | 24 | 4 |
| 255 | 24.89 | wind | 7.0 | 43200 | > th | dose dependent | rect. | 10 | 1 |
| 256 | 24.89 | humidity | 50.0 | 90 | > th | dose dependent | rect. | 3 | 12 |
| 276 | 24.91 | radiation | 1.0 | 10 | > th | dose dependent | rect. | 9 | 3 |
| 282 | 24.92 | atmosphere | 1005.0 | 14400 | < th | dose independent | sin | 18 | NA |
| 298 | 24.94 | radiation | 40.0 | 1440 | < th | dose independent | rect. | 17 | 16 |
| 358 | 25.02 | radiation | 40.0 | 1440 | > th | dose independent | rect. | 14 | 1 |
| 372 | 25.03 | temperature | 15.0 | 270 | > th | dose independent | rect. | 6 | 19 |
| 409 | 25.05 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 6 | 19 |
| 424 | 25.05 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 6 | 19 |
| 428 | 25.06 | wind | 3.0 | 43200 | < th | dose independent | rect. | 24 | 4 |
| 448 | 25.06 | radiation | 20.0 | 90 | < th | dose dependent | sin | 2 | NA |
| 450 | 25.07 | wind | 1.0 | 14400 | > th | dose independent | rect. | 18 | 1 |
| 451 | 25.07 | radiation | 40.0 | 1440 | < th | dose independent | rect. | 14 | 1 |
| 452 | 25.07 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 13 | 1 |
| 458 | 25.07 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 13 | 1 |
| 463 | 25.08 | radiation | 20.0 | 90 | < th | dose independent | rect. | 3 | 15 |
| 464 | 25.08 | radiation | 40.0 | 1440 | > th | dose dependent | rect. | 14 | 2 |
| 493 | 25.09 | wind | 9.0 | 270 | < th | dose independent | rect. | 6 | 19 |
| 495 | 25.09 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 19 | 21 |
| 500 | 25.10 | radiation | 10.0 | 270 | < th | dose independent | rect. | 1 | 14 |
| 504 | 25.10 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 6 | 2 |
| 508 | 25.11 | humidity | 90.0 | 270 | > th | dose independent | rect. | 1 | 5 |
| 509 | 25.11 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 19 | 12 |
| 510 | 25.11 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 19 | 14 |
| 513 | 25.11 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 19 | 17 |
| 514 | 25.11 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 19 | 17 |
| 516 | 25.11 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 19 | 21 |
| 520 | 25.11 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 19 | 12 |
| 522 | 25.11 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 19 | 14 |
| 525 | 25.11 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 19 | 17 |
| 526 | 25.11 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 19 | 21 |
| 529 | 25.12 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 19 | 12 |
| 556 | 25.13 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 19 | 14 |
| 578 | 25.14 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 19 | 1 |
| 587 | 25.15 | precipitation | 0.1 | 270 | < th | dose independent | rect. | 1 | 5 |
| 588 | 25.15 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 19 | 9 |
| 595 | 25.15 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 21 | 19 |
| 598 | 25.15 | precipitation | 0.1 | 270 | < th | dose dependent | rect. | 1 | 5 |
| 607 | 25.16 | humidity | 90.0 | 14400 | > th | dose independent | rect. | 6 | 1 |
| 608 | 25.16 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 13 | 1 |
| 609 | 25.16 | atmosphere | 1010.0 | 270 | < th | dose independent | rect. | 1 | 5 |
| 610 | 25.16 | radiation | 10.0 | 270 | < th | dose independent | rect. | 1 | 5 |
| 615 | 25.16 | humidity | 50.0 | 10 | > th | dose dependent | sin | 3 | NA |
| 631 | 25.17 | radiation | 40.0 | 1440 | > th | dose dependent | rect. | 8 | 1 |
| 658 | 25.18 | radiation | 10.0 | 270 | < th | dose independent | rect. | 1 | 16 |
| 661 | 25.18 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 21 | 19 |
| 668 | 25.18 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 21 | 19 |
| 670 | 25.19 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 19 | 9 |
| 678 | 25.19 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 19 | 9 |
| 681 | 25.19 | humidity | 90.0 | 14400 | > th | dose dependent | rect. | 1 | 17 |
| 702 | 25.21 | wind | 9.0 | 270 | < th | dose independent | rect. | 1 | 5 |
| 703 | 25.21 | temperature | 10.0 | 270 | > th | dose independent | rect. | 1 | 5 |
| 706 | 25.21 | humidity | 50.0 | 270 | > th | dose independent | rect. | 1 | 5 |
| 709 | 25.21 | atmosphere | 995.0 | 270 | > th | dose independent | rect. | 1 | 5 |
| 716 | 25.21 | radiation | 40.0 | 1440 | < th | dose independent | rect. | 14 | 13 |
| 729 | 25.21 | radiation | 40.0 | 270 | < th | dose dependent | rect. | 1 | 5 |
| 746 | 25.22 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 19 | 1 |
| 747 | 25.22 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 19 | 1 |
| 748 | 25.22 | radiation | 40.0 | 1440 | < th | dose independent | rect. | 14 | 3 |
| 758 | 25.22 | radiation | 40.0 | 1440 | > th | dose dependent | no | NA | NA |
| 761 | 25.22 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 19 | 1 |
| 763 | 25.22 | radiation | 20.0 | 270 | < th | dose dependent | rect. | 1 | 5 |
| 765 | 25.22 | radiation | 40.0 | 1440 | > th | dose dependent | rect. | 8 | 8 |
| 926 | 25.23 | humidity | 50.0 | 270 | > th | dose dependent | rect. | 1 | 5 |
| 928 | 25.23 | wind | 9.0 | 270 | < th | dose dependent | rect. | 6 | 8 |
| 966 | 25.24 | radiation | 40.0 | 1440 | > th | dose dependent | sin | 7 | NA |
| 969 | 25.24 | radiation | 40.0 | 1440 | > th | dose dependent | sin | 5 | NA |
| 987 | 25.25 | radiation | 40.0 | 1440 | > th | dose dependent | sin | 3 | NA |