BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os10g0155300 Os10g0155300|AK070930
(379 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os10g0155300 Cyclin-like F-box domain containing protein 685 0.0
Os11g0166100 Cyclin-like F-box domain containing protein 189 3e-48
Os10g0145200 Cyclin-like F-box domain containing protein 141 7e-34
Os10g0136200 Cyclin-like F-box domain containing protein 138 8e-33
Os10g0137000 Cyclin-like F-box domain containing protein 133 2e-31
Os02g0249700 Cyclin-like F-box domain containing protein 130 1e-30
Os10g0142500 Cyclin-like F-box domain containing protein 127 2e-29
Os10g0137700 Cyclin-like F-box domain containing protein 124 8e-29
Os05g0320100 Cyclin-like F-box domain containing protein 118 8e-27
Os10g0138000 Cyclin-like F-box domain containing protein 116 2e-26
Os10g0145000 Cyclin-like F-box domain containing protein 115 4e-26
Os10g0145100 Cyclin-like F-box domain containing protein 107 1e-23
Os07g0120400 Cyclin-like F-box domain containing protein 105 6e-23
Os07g0122900 Cyclin-like F-box domain containing protein 87 2e-17
Os10g0136900 Conserved hypothetical protein 85 8e-17
Os07g0120500 Protein of unknown function DUF538 family protein 81 1e-15
Os10g0139300 Cyclin-like F-box domain containing protein 74 2e-13
Os10g0144800 Cyclin-like F-box domain containing protein 73 3e-13
Os06g0249700 71 1e-12
>Os10g0155300 Cyclin-like F-box domain containing protein
Length = 379
Score = 685 bits (1768), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 335/335 (100%), Positives = 335/335 (100%)
Query: 45 ASTLPTASAVCKRWRRLAFEPGFRRRFVARHEPPFLGFFFPYDFDPVFSFNAGFRSTTAQ 104
ASTLPTASAVCKRWRRLAFEPGFRRRFVARHEPPFLGFFFPYDFDPVFSFNAGFRSTTAQ
Sbjct: 45 ASTLPTASAVCKRWRRLAFEPGFRRRFVARHEPPFLGFFFPYDFDPVFSFNAGFRSTTAQ 104
Query: 105 HHLPAHRFLPEREIGLRWEIVNCCKGLALFRITFRGGCKCKEFMVVDPISGDRRLLPFPL 164
HHLPAHRFLPEREIGLRWEIVNCCKGLALFRITFRGGCKCKEFMVVDPISGDRRLLPFPL
Sbjct: 105 HHLPAHRFLPEREIGLRWEIVNCCKGLALFRITFRGGCKCKEFMVVDPISGDRRLLPFPL 164
Query: 165 VDGKFLSATVVPAAADRRSFRVVAVFAERNTFTSVFASVYSSDAGVWSDYVSRLCLPWEV 224
VDGKFLSATVVPAAADRRSFRVVAVFAERNTFTSVFASVYSSDAGVWSDYVSRLCLPWEV
Sbjct: 165 VDGKFLSATVVPAAADRRSFRVVAVFAERNTFTSVFASVYSSDAGVWSDYVSRLCLPWEV 224
Query: 225 WVLRPSVLAGNAVHWFLDGYNVLMFDLESQKLGFSELPLDAKDDEDFPHRCRCQIIPAGD 284
WVLRPSVLAGNAVHWFLDGYNVLMFDLESQKLGFSELPLDAKDDEDFPHRCRCQIIPAGD
Sbjct: 225 WVLRPSVLAGNAVHWFLDGYNVLMFDLESQKLGFSELPLDAKDDEDFPHRCRCQIIPAGD 284
Query: 285 GRLGLAVIVGSTMQLWEREIGDGSDATWLLRRTLQLNFLPLEAEGRKLIVGVAEENSSIL 344
GRLGLAVIVGSTMQLWEREIGDGSDATWLLRRTLQLNFLPLEAEGRKLIVGVAEENSSIL
Sbjct: 285 GRLGLAVIVGSTMQLWEREIGDGSDATWLLRRTLQLNFLPLEAEGRKLIVGVAEENSSIL 344
Query: 345 LWTRVGLFMVHLKFLQVRKVYGEISVDNYYPYSSF 379
LWTRVGLFMVHLKFLQVRKVYGEISVDNYYPYSSF
Sbjct: 345 LWTRVGLFMVHLKFLQVRKVYGEISVDNYYPYSSF 379
>Os11g0166100 Cyclin-like F-box domain containing protein
Length = 369
Score = 189 bits (481), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 137/359 (38%), Positives = 195/359 (54%), Gaps = 44/359 (12%)
Query: 46 STLPTASAVCKRWRRLAFEPGFRRRFVARHEP--PFLGFFFPYDFD----PVFSFNAGFR 99
S+L A+ VC RWRRL +P RRR A H P GFF+ D P+
Sbjct: 30 SSLARAACVCSRWRRLVSDPALRRRLRAHHRDHLPLHGFFYHSDHSARLWPILE------ 83
Query: 100 STTAQHHLPAHRFLPEREIGLRWEIVNCCKGLALFRITFRGGCKCKEFMVVDPISGDRRL 159
+PA R P ++ W++++C GL L + ++FMV+DP++G++
Sbjct: 84 ---RPDRIPAWRVAPTEKLLPGWQVLSCSHGLVLHK-------DREKFMVLDPVAGEQHA 133
Query: 160 LPFPLV---DGKFLSATVVPAAADRRS--FRVVAVFAERNTFTSVFASVYSSDAGVWSDY 214
+PFP F+ VVP+ RRS +RVVA+FA R+T T V A VYSS++G W D
Sbjct: 134 VPFPSSVEDTSGFVLGMVVPS---RRSSSYRVVALFAGRSTSTRVAAYVYSSESGSWGDS 190
Query: 215 ---VSRLCLPWEV-WVLRPSVLAGNAVHWFLDGYNVLMFDLESQKLGFSELPLDAKDDED 270
++ L LP + R + G+ +HWFLDG+ VL FDLE Q L ELP + D D
Sbjct: 191 DSPIATLVLPSKAKHRARHGTIVGSVIHWFLDGHKVLTFDLERQILAIIELPPEVVKDTD 250
Query: 271 FPHRCRCQIIPA---GDGRLGLAVIVGSTMQLWEREI--GDGSDA--TWLLRRTLQLNFL 323
+ RCQIIPA G G + LAV+ MQ WER+ GDGS A TW+L T++LNF
Sbjct: 251 SFYEFRCQIIPALDDGVGEVRLAVLADPNMQFWERKKTGGDGSGAAYTWVLSSTVRLNFP 310
Query: 324 PLEAEGRKL---IVGVAEENSSILLWTRVGLFMVHLKFLQVRKVYGEISVDNYYPYSSF 379
+E+ L ++G +E+++I +W + LFMV+L+ +Q RKV + +PYSS
Sbjct: 311 SIESIRSDLKYQVLGFDDESNAIFIWVQNVLFMVYLRSMQSRKVLDHWPPADIFPYSSL 369
>Os10g0145200 Cyclin-like F-box domain containing protein
Length = 378
Score = 141 bits (356), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 118/351 (33%), Positives = 166/351 (47%), Gaps = 28/351 (7%)
Query: 46 STLPTASAVCKRWRRLAFEPGFRRRFVARHE-PPFLGFFFPYDFDPVFSFNAGFRSTTAQ 104
S L AS VC RWRRLA +PGF RR A H PP LGFF P F G A
Sbjct: 34 SFLSRASLVCNRWRRLARDPGFLRRLRAFHRTPPVLGFFHNSPDLPRFVPAEGVPGRVAA 93
Query: 105 HHLPAHRFLPEREIGLRWEIVNCCKGLALFRITFRGGCKCKEFMVVDPISGDRRLLPFP- 163
R + + G+ W V+C G AL R E +V DP++G+RR +
Sbjct: 94 EAASLRR---DGDDGM-WWCVDCRHGRALLRSR-----DWAELLVWDPMTGERRCITVSS 144
Query: 164 -LVDGKF-LSATVVPAAA-------DRRSFRVVAVFAERNTFTSVFASVYSSDAGVWSDY 214
+ +G L+A V AA+ F VV VF VFA VYSS W D
Sbjct: 145 QIQEGALDLNAAVFCAASGGGDQDCHSSPFHVVVVFTTGQCHGRVFACVYSSGIDAWGDP 204
Query: 215 VSR-LCLPWEVWVLRPSVLAGNAVHWFLDGYNVLMFDLESQKLGFSELPLDAKDDEDFPH 273
+S + P E++ P VL G A++W LDG +L F+ +Q L + + ++
Sbjct: 205 ISTPVTSPCELYE-EPPVLVGEALYWLLDGSRILEFEFGNQCLCLALIDHPVENHAILKR 263
Query: 274 RCRCQIIPAGDGRLGLAVIVGSTMQLWEREIGDGSDATWLLRRTLQLNF-LPLEA-EGRK 331
R + D LGLA + ++ LW RE+ D + W+ RR ++L+ LPLE R
Sbjct: 264 NIRL-VRMEDDDVLGLAFVKDFSLHLWAREVADDGASQWIPRRAIELDMILPLEGYRCRA 322
Query: 332 L---IVGVAEENSSILLWTRVGLFMVHLKFLQVRKVYGEISVDNYYPYSSF 379
+ I G AE+ + + T G+F+V L L+ +KV G + + Y Y+SF
Sbjct: 323 MPIWICGFAEDGDVVFIRTVAGVFLVWLDTLKFKKVSGSLLMKTVYSYASF 373
>Os10g0136200 Cyclin-like F-box domain containing protein
Length = 402
Score = 138 bits (347), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 111/356 (31%), Positives = 170/356 (47%), Gaps = 37/356 (10%)
Query: 46 STLPTASAVCKRWRRLAFEPGFRRRFVARH-EPPFLGFFFPYDFDPVFSFNAGFRSTTAQ 104
S+LP AS VCK+WRRL +P F RRF ARH +PP LG F PV FRS
Sbjct: 50 SSLPRASLVCKQWRRLVSDPAFLRRFRARHRDPPLLGVFKDELHHPV------FRSVLDP 103
Query: 105 HHL-PAHRFLPEREIGLRWEIVNCCKGLALFRITFRGGCKCKEFMVVDPISGDRRLLPFP 163
L P RF + ++ C GL L I C EF+V DP+SGDRR + P
Sbjct: 104 PDLIPPDRFALRLDDYRAASLLGCRHGLVL--IFNYNTC---EFLVWDPVSGDRRRVAVP 158
Query: 164 ---------LVDGKFLSATVVPAAADRRSFRV----VAVFAERNTFTSVFASVYSSDAGV 210
+++G L A FR V + +FAS+YSS G
Sbjct: 159 QELDGGERSVMNGAVLCAAGDDGHVHGGGFRSCHFKVVLIGASKMDGRIFASIYSSVTGE 218
Query: 211 WSDYVSRLCLPWEVWVLRPSVLAGNAVHWFLD--GYNVLMFDLESQKLGFSELPLDAK-D 267
W D + + + P++L GN+++W L G ++L F+LE+ L +D
Sbjct: 219 WGDAIFTGPVSTIYYFGSPAILVGNSLYWLLSVWGPHILEFNLETSTLAV----IDGNWP 274
Query: 268 DEDFPHRCRCQIIPAGDGRLGLAVIVGSTMQLWEREIGDGSDATWLLRRTLQL-NFLPLE 326
+F C I+ DG +GLA++ Q+WER++ G A W+L +T++L + L L
Sbjct: 275 QMNFSSDCHYCIMRGEDGNVGLAILSYRGFQMWERKVTLGGAAKWVLWKTVKLHDILGLS 334
Query: 327 AEGRKL---IVGVAEENSSILLWTRVGLFMVHLKFLQVRKVYGEISVDNYYPYSSF 379
+ ++ IVG +E+ ++ +L +M + +Q +K++ V +P++SF
Sbjct: 335 SAVQREKTDIVGYSEDPNAFILVVDTDFYMFRVDSMQSKKLFDCNVVTRCHPFTSF 390
>Os10g0137000 Cyclin-like F-box domain containing protein
Length = 372
Score = 133 bits (335), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 124/353 (35%), Positives = 172/353 (48%), Gaps = 43/353 (12%)
Query: 46 STLPTASAVCKRWRRLAFEP--GFRRRFVARHEPPFLGFFFPYDFDPVFSFNAGFRSTTA 103
S+LP AS VCKRWRRL +P R R R+ PP +G F Y P FRS
Sbjct: 37 SSLPRASLVCKRWRRLVTDPAFHRRFRARHRNPPPLIGVFEDYLGYPF------FRSVLD 90
Query: 104 QHHL-PAHRF---LPEREIGLRWEIVNCCKGLALFRITFRGGCKCKEFMVVDPISGDRRL 159
L P F L E E G +W C G R+ K E +V P +GD R
Sbjct: 91 PPDLIPRECFRLRLAEDEGG-QWHFYGCRHG----RLLLFNRAK-NEIVVWVPDTGDHRQ 144
Query: 160 LPF-PLVDGK----FLSATVVPAAADRRSFRVVAVFAERNTFTSVFASVYSSDAGVWSDY 214
+ P +DGK + A + A AD FRVV V N T +FA VY S++G WSD
Sbjct: 145 VAVPPEIDGKEKIIWNGAVLSAATADDGPFRVVLVGVAGNN-TQMFACVYCSESGKWSDL 203
Query: 215 VSRLCLPWEVWVLR-PSVLAGNAVHWFLDG---YNVLMFDLESQKLGFSELPLDAKDDED 270
+S + P+ V+ R P +LAGNA++W G VL FDL+ Q L E P D++
Sbjct: 204 IS-VAAPFLVFFFRDPGILAGNALYWMAYGERWLTVLQFDLDKQTLSVIEWPYDSEPYSQ 262
Query: 271 FPHRCRCQIIPAGDGRLGLAVIVGSTMQLWEREIGDGSDATWLLRRTLQLNFLPLEAEGR 330
+ GD LG A + S++Q+WER++ G A W+L++T +L + L E R
Sbjct: 263 -------TWLTEGDC-LGAATLSRSSLQMWERKVCSGGVAKWVLQKTYELKNV-LNPEFR 313
Query: 331 KLI-----VGVAEENSSILLWTRVGLFMVHLKFLQVRKVYGEISVDNYYPYSS 378
I +G A++ + LW +FM+ L LQ +KV+ + +PY+S
Sbjct: 314 LKIGYLTKLGYAQDIKVMFLWADHSVFMLQLDTLQAKKVWESCVIAPIHPYAS 366
>Os02g0249700 Cyclin-like F-box domain containing protein
Length = 439
Score = 130 bits (327), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 110/358 (30%), Positives = 173/358 (48%), Gaps = 38/358 (10%)
Query: 46 STLPTASAVCKRWRRL-AFEPGFRRRFVARHE--PPFLGFFFPYDFDPVFSFNAGFRSTT 102
S+LP A+AVC RWRRL +P F RRF A H P LGFF + P F
Sbjct: 27 SSLPRAAAVCARWRRLVTADPAFLRRFRAHHRRGAPLLGFFHSHRVSPSFVSTMDPPDRV 86
Query: 103 AQHHLPAHRFLPEREIGLRWEIVNCCKGLALFR---ITFRGGCKCKEFMVVDPISGDRRL 159
RF R R I+ C GL L + GC F+V DP+SGD+R
Sbjct: 87 PAAVGAGGRF-SLRFDDFRCRILGCRDGLVLAVNPVMPRLRGC----FLVWDPVSGDQRR 141
Query: 160 LPFP------LVDGKFLSATVVPAAADRRSFRVVAVFAERNTFTSVFASVYSSDAGVWSD 213
+ FP + + + +P F++V V R+ + ++ +YSS+ G W D
Sbjct: 142 VAFPPECDQGQTEVRNGAVFRLPGGGGGFRFQIVLV-GTRHQYEAI-GCIYSSETGKWGD 199
Query: 214 YVSRLCLPWE---VWVLRPSVLAGNAVHWFLDGY--NVLMFDLESQKLG-FSELPLDAKD 267
++ LP + + P V G++++W + G +L FDL Q+L ++P+ D
Sbjct: 200 LIA-TPLPHNLTRISLAVPGVRIGDSLYWLISGIPGGILEFDLNEQRLAVIDDVPMAVSD 258
Query: 268 DEDFPHRCRCQIIPAGDGRLGLAVIVGSTMQLWEREIG---DGSDATWLLRRTLQLNFL- 323
+R C ++PA DG LG + Q W R+ D S++ W+L +T+QL L
Sbjct: 259 G----YRRFC-VVPAADGGLGFVFMSDLGSQFWRRKNDWDDDVSESGWVLEKTVQLGELL 313
Query: 324 ---PLEAEGRKLIVGVAEENSSILLWTRVGLFMVHLKFLQVRKVYGEISVDNYYPYSS 378
P E +G +++G +E+ + I L T GLFMVHL+ ++ +++ + + YP++S
Sbjct: 314 SLSPTERKGSPIVMGFSEDYNVIFLKTINGLFMVHLESMEFKRILKDCAALFIYPFAS 371
>Os10g0142500 Cyclin-like F-box domain containing protein
Length = 394
Score = 127 bits (318), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 109/348 (31%), Positives = 168/348 (48%), Gaps = 43/348 (12%)
Query: 46 STLPTASAVCKRWRRLAFEPGFRRRFVARH-EPPFLGFFF-PYDFDPVFSFNAGFRST-T 102
+ L A AVC+RWRR+A EPGF RR+ A H EPP LGFF P +P+ FR+T
Sbjct: 27 TQLIRAGAVCRRWRRIAAEPGFLRRYRAHHGEPPLLGFFVNPRGREPL------FRATLD 80
Query: 103 AQHHLPAHRF----LPEREIGLRWEIVNCCKGLALFRITFRGGCKCKEFMVVDPISGDR- 157
A +P RF + E+G W C G L + ++ G C++ ++ DP+SGD
Sbjct: 81 APDRVPPERFSIRLHDDTELGGNWYYHGCRHG-RLLLLNWKSGLGCRQILIWDPVSGDLI 139
Query: 158 RLLPFPLVD---GKFLSATVVPAAA------------DRRSFRVVAVFAERNTFTSVFAS 202
L P P +D G F ATV+ AA F+VV V +R+T FA
Sbjct: 140 HLSPPPQLDALKGVFFQATVICAATTAAGDHVHGDNCKSNPFKVVLVGTDRST---AFAF 196
Query: 203 VYSSDAGVWSDYVSRLCLPWEVWVLRPSVLAGNAVHWFLDGY--NVLMFDLESQKLGFSE 260
VYSS+ G W D+ + + + + + G+ ++W L GY N+L F+L + L
Sbjct: 197 VYSSETGDWGDHAAETPVGNCISLGCRCIQIGDFLYWMLFGYDNNILEFNLVNHSLSVVY 256
Query: 261 LPLDAKDDEDFPHRCRCQIIPAGDGRLGLAVIVGSTMQLWEREIGDGSDATWLLRRTLQL 320
+P +D D + Q LGL V+ S MQ+W+ I WL + L
Sbjct: 257 VPTHIHEDHDGLYPITLQ----EGTELGLIVMSRSCMQIWQWMIDFDGLPGWLPLEPIYL 312
Query: 321 -NFLPL---EAEGRKLIVGVAEENSSILLWTRVGLFMVHLKFLQVRKV 364
N L L E ++G +++ + + + + +FMV+L+ L+ +++
Sbjct: 313 DNLLHLSAGECVNPTKVLGFSQDYNELFVASSTRIFMVNLESLRFKEL 360
>Os10g0137700 Cyclin-like F-box domain containing protein
Length = 391
Score = 124 bits (312), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 112/373 (30%), Positives = 178/373 (47%), Gaps = 61/373 (16%)
Query: 46 STLPTASAVCKRWRRLAFEPGFRRRFVARH-EPPFLGFFFPYDFDPVFSFNAGFRSTTAQ 104
S+LP AS VC RWRRL + GF RRF ARH +PP LG + P+F+ +
Sbjct: 33 SSLPRASLVCTRWRRLVSDRGFLRRFRARHRKPPLLGVIQVCAY-PIFA-----PALDPP 86
Query: 105 HHLPAHRF---LPERE-----IGLRWEIVNCCKGLALFRITFRGGCKCKE--FMVVDPIS 154
+PA RF L R +G+R G AL + C+ + +V DP++
Sbjct: 87 DRIPAARFSWRLDNRHDLNDLLGVR-------HGRALVHVN---TCRYSQRRLIVWDPVA 136
Query: 155 GDRRLLPFPLVDGKFLSATVVPAAADRRS------------------FRVVAVFAERNTF 196
GDRR + P G F VV A + R F VV + +N
Sbjct: 137 GDRRAVAIP---GGFRDRGVVVRAGEVRCVAGDGDPGHVHGGCHSSPFEVVILGTNKNR- 192
Query: 197 TSVFASVYSSDAGVWSDYVSRLCLPWEVWVLRPSVLAGNAVHWFLDG---YNVLMFDLES 253
T FA VYSS+ G+W + +S + + + + L GN+++ L G + FDL+
Sbjct: 193 THAFACVYSSETGIWGNVIS-AAVNFGDCICNFTTLVGNSLYCLLLGEQRTSFFQFDLDK 251
Query: 254 QKLGFSELPLDAKDDEDFPHR---CRCQIIPAGDGRLGLAVIVGSTMQLWEREIGDGSDA 310
Q ++P D D + HR C+ PA +G L V+ T+ +W+ E A
Sbjct: 252 QITAQIDVPPDMHPDGNGHHRFGDTICRFAPAENGGLLFLVVTHYTLNVWKSETNADGVA 311
Query: 311 TWLLRRTLQLN-FLPLEAEGRK---LIVGVAEENSSILLWTRVGLFMVHLKFLQVRKVYG 366
W+L +T++L+ L LE +K +++G +EE++ + T +G+ M+HL+ + + V
Sbjct: 312 GWVLEKTIELDRLLSLEPGPQKTAPMLLGFSEEHNVAFVCTYIGVSMIHLESKEFKSVSQ 371
Query: 367 EISVDNYYPYSSF 379
+S+ Y+P++SF
Sbjct: 372 RMSLI-YHPFTSF 383
>Os05g0320100 Cyclin-like F-box domain containing protein
Length = 377
Score = 118 bits (295), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 114/356 (32%), Positives = 163/356 (45%), Gaps = 44/356 (12%)
Query: 46 STLPTASAVCKRWRRLAFEP-GFRRRFVARHEPPFLGFFFPYDFDPVFSFNAGFRSTTAQ 104
S+LP AS VCKRWRRL +P RR PP +G F Y P FRS
Sbjct: 37 SSLPRASLVCKRWRRLVTDPAFHRRFRARHRNPPLIGVFEDYLGYPF------FRSVLDP 90
Query: 105 HHL-PAHRF---LPEREIGLRWEIVNCCKGLALFRITFRGGCKCKEFMVVDPISGD-RRL 159
L P RF L E E G +W C G R+ K E +V P +GD RR+
Sbjct: 91 PDLIPRERFRLRLAEDE-GGQWRFYGCRHG----RVLLFNRAK-NEILVWVPDTGDHRRV 144
Query: 160 LPFPLVDGK--------FLSATVVPAAADRRSFRVVAVFAERNTFTSVFASVYSSDAGVW 211
P +DGK LSA F+VV V N T +FA VY S++G W
Sbjct: 145 AVPPEIDGKEKIIWNGAVLSAANADDGFSSCPFKVVLVGVAGNN-TQMFACVYCSESGKW 203
Query: 212 SDYVSRLCLPWEVWVLR-PSVLAGNAVHWFLD---GYNVLMFDLESQKLGFSELPLDAKD 267
SD +S + P+ V+ R P +L G+A++W G +L FDL+ Q E P D+
Sbjct: 204 SDLIS-VAAPFLVFFFRDPGILVGHALYWMASGDHGSTILQFDLDDQTPAVIEWPSDSDP 262
Query: 268 DEDFPHRCRCQIIPAGDGRLGLAVIVGSTMQLWEREIGDGSDATWLLRRTLQLNFLPLEA 327
+ C Q L +A ++Q+WER++ A W+L++T +L + L
Sbjct: 263 N------CYTQTWLTEGDCLRVATFSRGSLQMWERKVCSEGVAKWVLQKTYELKNV-LNP 315
Query: 328 EGRKLI-----VGVAEENSSILLWTRVGLFMVHLKFLQVRKVYGEISVDNYYPYSS 378
E R + +G A++ + +W +FM+ L LQ +KV+ + +PY+S
Sbjct: 316 EIRLNVEYVTKLGYAQDIKVMFVWAAHSVFMLQLDSLQAKKVWESCVIAPIHPYAS 371
>Os10g0138000 Cyclin-like F-box domain containing protein
Length = 728
Score = 116 bits (291), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 112/350 (32%), Positives = 154/350 (44%), Gaps = 64/350 (18%)
Query: 46 STLPTASAVCKRWRRLAFEPGFRRRFVARH-EPPFLGFFFPYDFDPVFSFNAGFRST-TA 103
S+LP AS VCK+WRR+ +P F RR+ A H EP LGFF + PVF RS A
Sbjct: 37 SSLPRASLVCKQWRRVVSDPAFLRRYRAHHGEPLLLGFFADHCGYPVF------RSIHDA 90
Query: 104 QHHLPAHRFLPEREIG---LRWEIVNCCKGLALFRITFRGGCKCKEFMVVDPISGDRRLL 160
+P FL R+ G W+++ C G L R E V DP +G R
Sbjct: 91 PDRIPPEHFLMPRDKGAGRCNWDVLGCRHGRVLVYNRTR-----NEITVWDPATGHRSCA 145
Query: 161 PFPLVDGKFLSATVVPAAADRRSFRVVAVFAERNTFTSVFASVYSSDAGVWSDYVSRLCL 220
P G V AAD VW D ++ C
Sbjct: 146 AAPPELGDDKEKIVFNGAAD-----------------------------VWGDLITLECP 176
Query: 221 PWEVWVLRPSVLAGNAVHWFLDGY--NVLMFDLESQKLGFSELP---LDAKDDEDFPHRC 275
P L PS L G +++W G +L FDL Q L E+P L F
Sbjct: 177 PVYDTCL-PSTLIGYSLYWLFSGEEEGILEFDLGRQSLATIEMPSEFLHYNSHRSF---- 231
Query: 276 RCQIIPAGDGRLGLAVIVGSTMQLWEREI-GDGSD-ATWLLRRTLQLN-FLPLEAEG--R 330
QI+PA DG + LA++ M+LWER+I DG A W + + ++L L L G +
Sbjct: 232 --QIMPAEDGGICLAILSYQIMELWERKISSDGVGVAEWTMLKKIELGVILGLGHMGGWQ 289
Query: 331 KLIVGVAEENSSILLWTRVGLFMVHLKFLQVRKVYGEISVDNY-YPYSSF 379
LIV E+ I + T G+FM+HL+ +Q + + G+ + D + YS+F
Sbjct: 290 NLIVAYDEDYQLIFVRTINGVFMIHLESMQFKNL-GKDNFDGILHAYSAF 338
>Os10g0145000 Cyclin-like F-box domain containing protein
Length = 400
Score = 115 bits (289), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 105/355 (29%), Positives = 154/355 (43%), Gaps = 37/355 (10%)
Query: 46 STLPTASAVCKRWRRLAFEPGFRRRFVARHE-PPFLGFFFPYDFDPVFSFNAGFRSTTAQ 104
S L +AS V KRW R P F RRF H P LGFF +F A
Sbjct: 36 SFLSSASLVSKRWLRHTRNPSFLRRFREFHRTAPVLGFFLNSSHGALFFPTDAPLCRIAD 95
Query: 105 HHLPAHRFLPEREIGLRWEIVNCCKGLALFRITFRGGCKCKEFMVVDPISGDRRLLPFPL 164
R + GL W +V C G L R C +V DP++ P P+
Sbjct: 96 QVASLRRNTGD---GLWW-LVGCRHGRVLLR-----SCDWANLLVWDPMTEGFVCFPAPI 146
Query: 165 ----VDGKFLSATVVPAAA---DRRS--FRVVAVFAERNTFTSVFASVYSSDAGVWSDYV 215
D +A A+A DRRS F V VF + VF ++SS G W D +
Sbjct: 147 QMVQADADRDAAVFCAASAGDEDRRSGAFNVAVVFVSGD---HVFGCMFSSAIGAWGDVI 203
Query: 216 SR-LCLPWEVWVLRPSVLAGNAVHWFLDGYNVLMFDLESQKLGFSELPLDAKDDEDFPHR 274
S + LP + P+ LAG A++W ++G ++L F+ SQ L P D HR
Sbjct: 204 STPVTLPLLMIYDEPAALAGEALYWIVNGSSLLEFNCGSQSLALISRPSDMPAT----HR 259
Query: 275 CRCQIIPAGDGRLGLAVIVGSTMQLWEREIGDGSDATWLLRRTLQLN---FLPLEAEGRK 331
+ + D LGLA + LW RE+ D W+ R++++++ LP+ E +
Sbjct: 260 WNIRPVSLEDDLLGLAFFNDFCLHLWVREVADDGATNWVPRKSVEMDKLLSLPVATEDSR 319
Query: 332 ------LIVGVAEENSSILLWTRVGLFMVHLKFLQVRKVY-GEISVDNYYPYSSF 379
I G + + + + + T G+F+V L L+ +KV G + + +PY SF
Sbjct: 320 RRIVPAWICGFSGDGNVVFIGTPAGIFLVELDTLKFKKVTDGSLLIKTVHPYESF 374
>Os10g0145100 Cyclin-like F-box domain containing protein
Length = 379
Score = 107 bits (268), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 108/359 (30%), Positives = 151/359 (42%), Gaps = 55/359 (15%)
Query: 51 ASAVCKRWRRLAFEPGFRRRFVARHE-PPFLGFFFPYDFDPVFSFNAGFRSTTAQHHLPA 109
AS VCKRW L P F RR A H PP LGFF Y P F G
Sbjct: 37 ASLVCKRWLHLIRSPSFLRRVCAFHRTPPVLGFFHNYRDLPSFVPAEGVPGR-------- 88
Query: 110 HRFLPEREIGLRWEIVNCCKGLALFRITFRGGCKCKEFMVVDPISGDRRLLPFPLVDGK- 168
+R + G ++C G AL R + +V DP++G+RR + P +
Sbjct: 89 NRMDGVDDGGDARMFIDCRHGRALLRRY-----DWADLVVWDPMTGERRRIAGPNQKMQG 143
Query: 169 ------------FLSATVVPAAADR----RSFRVVAVFAERNTFTSVFASVYSSDAGVWS 212
F S V D+ F VV VF FA VYSS W
Sbjct: 144 GGAGTSRRSAALFCSCDVSGGGGDQDCHSSPFHVVVVF---TGGCRAFACVYSSLTDAWG 200
Query: 213 DYVSRLC-LPWEVWVLRPSVLAGNAVHWFLDGYNVLMFDLESQKLGFSELPLDAKDDEDF 271
D +S LP E+ P L G A +W G +L F SQ L + PL+ D
Sbjct: 201 DLISTPAPLPCEL-CDTPPALVGEASYWLSYGGLILEFQFGSQSLTLMKRPLEMLAD--- 256
Query: 272 PHRCRCQIIPAGDGRLGLAVIVGSTMQLWEREIGDGSDA--TWLLRRTLQLN-FLPLE-- 326
+++ + LGLA I ST+ LW RE+ D W+ RR ++L+ FLP+
Sbjct: 257 -----VRLVRLEEDGLGLAFIKDSTLHLWAREVADDGAPKWKWIPRRAIELDKFLPMPRV 311
Query: 327 ------AEGRKLIVGVAEENSSILLWTRVGLFMVHLKFLQVRKVYGEISVDNYYPYSSF 379
E I G +E+ + + + T G+F+V L+ L+ +K+ + + +PYSSF
Sbjct: 312 LTGKWCGEMFVSISGFSEDGNVVFIRTLAGVFLVWLEALKFKKMSDPLYMMTVHPYSSF 370
>Os07g0120400 Cyclin-like F-box domain containing protein
Length = 368
Score = 105 bits (262), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 101/347 (29%), Positives = 155/347 (44%), Gaps = 33/347 (9%)
Query: 46 STLPTASAVCKRWRRLAFEPGFRRRFVARHE-PPFLGFFFPYDFDPVFSFNAGFRSTTAQ 104
++L AS VCKRWR+L +P F RR+ A H PP LGF D S+ F +TT+
Sbjct: 26 ASLVRASLVCKRWRQLLTDPAFLRRYRAFHRTPPMLGFIHNVDHSSNSSYIPRFVATTSP 85
Query: 105 HHLPAHRFLPEREIGLRWEIVNCCKGLALFRITFRGGCKCKEFMVVDPISGDRRLLPFP- 163
P E W ++C G L ++ + MV DP +GD R+ P P
Sbjct: 86 SPFYPDFPPPSIEFPTYWWALDCRHGRLLLQLF-----NPIDLMVWDPTTGDHRIFPQPP 140
Query: 164 ----LVDGKFLSATVVPAAADRRSFRVVAVFAERNTFTSVFASVYSSDAGVWSDYVSRLC 219
G L AT D + VF +A VYSS+ G WS S+
Sbjct: 141 YLDFYCTGAVLCATRGCRHVDCHGGPYLVVFVGTGEDDHSWACVYSSETGEWS---SQAS 197
Query: 220 LPWEVWV-LRPSVLAGNAVHWFLD-GYNVLMFDLESQKLGFSELPLDAKDDEDFPHRCRC 277
+ ++ +V + P +L + +++ + G +L +D+ +L SE+ D H
Sbjct: 198 IAFDSYVEMLPGLLVQDTLYFRCERGKRILGYDIGRHEL--SEI-----DPPPLGHEVGI 250
Query: 278 QIIPAGDGRLGLAVIVGSTMQLWEREIGDGSDATWLLRRTLQLNFL-PLEAEGRKL-IVG 335
++ +G G LG A + ++ LW R +GD W + L+FL P+ + G
Sbjct: 251 -LMESGYGGLGFATVEDCSILLWSRYVGDDGIEEWKKSWVIGLDFLNPVGNPSLSWELAG 309
Query: 336 VAEENSSILLWTRVGLFMVHLKFLQVRKVYGEISVDNYY---PYSSF 379
AE +I + + +G+F + LK QV+K+ E YY PY SF
Sbjct: 310 FAEGVHTIFISSEIGVFTIELKSGQVKKLCEE----GYYTVVPYMSF 352
>Os07g0122900 Cyclin-like F-box domain containing protein
Length = 386
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 117/351 (33%), Positives = 156/351 (44%), Gaps = 50/351 (14%)
Query: 51 ASAVCKRWRRLAFEPGF---RRRFVARHEPPFLGFFFPYDFDP---VFSFNAGFRSTTAQ 104
ASAVCK WRRL +P F R F R PP LGF +P V SF A F TTA
Sbjct: 29 ASAVCKPWRRLLSDPVFLRRHRAFHRRRAPPLLGFIHHVSDEPARRVPSF-AQFVPTTA- 86
Query: 105 HHLPAHRFLP-EREIGLRWEIVNCCKGLALFRITFRGGCKCKEFMVVDPISGD--RRLLP 161
F P E E W + +C G ALF+ E + DP++GD R+ P
Sbjct: 87 -------FRPAELEHKNCWPL-DCRHGRALFQ------SSNVELTIWDPMTGDVRRQREP 132
Query: 162 FPLVDGKFLSATVVPAAA-----DRRSFRVVAVFAERNTFTS----VFASVYSSDAGVWS 212
+ + F +A V+ A D V VF + AS YSS+ G W+
Sbjct: 133 YGTL-CTFATAAVLCAVPGCDHHDCHGGPFVLVFVGNDEDDDGEEIASASSYSSETGTWT 191
Query: 213 DYVSRLCLPWEVWVLRPSVLAGNAVHWFLD-GYNVLMFDLESQKLGFSELPLDAKDDEDF 271
+ +PSVLAG+AVH+ G +L +DL +L LP A D D
Sbjct: 192 AASTVHHDDSLELESKPSVLAGDAVHFLTYFGKAILRYDLTKLELSVI-LPPVAYGDGD- 249
Query: 272 PHRCRCQIIPAGDGRLGLAVIVG-STMQLWEREIGDGSDATWLLRRTLQL-NFLPLEAEG 329
++ A DG LGLA+ G +++ LW R G G W+ R + L LP
Sbjct: 250 -----ALLMTAEDGELGLALFDGEASIHLWARVAGAG----WVRRNVIDLYAVLPFFDPV 300
Query: 330 RKL-IVGVAEENSSILLWTRVGLFMVHLKFLQVRKVYGEISVDNYYPYSSF 379
L +VG AE I L T G + + LK LQ+ K++ + N +PY SF
Sbjct: 301 HSLSLVGFAEGTDIIFLHTIHGDYRMELKSLQISKLWEKDRCFNIFPYMSF 351
>Os10g0136900 Conserved hypothetical protein
Length = 297
Score = 85.1 bits (209), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 74/257 (28%), Positives = 119/257 (46%), Gaps = 27/257 (10%)
Query: 143 KCKEFMVVDPISGDRRLLPFP-LVDGK-------------FLSATVVPAAADRRSFRVVA 188
K E ++ DP +GD R + P +DGK V F V
Sbjct: 41 KQNEIVLWDPDTGDHRRVGIPPEIDGKEKIVWNEAALCAAADDDGHVHGGFSCCPFNVAL 100
Query: 189 VFAERNTFTSVFASVYSSDAGVWSDYVSRLCLPWEVWV-LRPSVLAGNAVHWFLDGYN-- 245
V N T +FA Y+S+ G WS+ + P+ V+ + P +L G++++WF G
Sbjct: 101 VGVASNN-TQMFACFYTSETGRWSNLIFTPA-PFLVFAFVDPGILVGHSLYWFPTGLGSA 158
Query: 246 VLMFDLESQKLGFSELPLDAKDDEDFPHRCRCQIIPAGDGRLGLAVIVGSTMQLWEREIG 305
+L FDL+ Q L E P + + H QI A G LGL + ++Q+WER++
Sbjct: 159 ILQFDLDRQTLAVIEWP---SNPNCYSHYMS-QIFLAEGGYLGLVTLSYDSLQIWERKVC 214
Query: 306 DGSDATWLLRRTLQLNFLPLEAEGRK----LIVGVAEENSSILLWTRVGLFMVHLKFLQV 361
W+L+RT +LN + G K + +G AE+ +LL +FM+ + LQ
Sbjct: 215 SEGVTRWVLQRTAELNKVLELGSGVKTSHLVRLGYAEDVKVMLLCADSSVFMLQIDSLQS 274
Query: 362 RKVYGEISVDNYYPYSS 378
RK++ + + +PY+S
Sbjct: 275 RKLWETNIMSSLHPYAS 291
>Os07g0120500 Protein of unknown function DUF538 family protein
Length = 516
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 73/222 (32%), Positives = 102/222 (45%), Gaps = 22/222 (9%)
Query: 51 ASAVCKRWRRLAFEPGFRRRFVARHE-PPFLGFFFPYDFDPVFSFNAGFRSTTAQHHLPA 109
AS VCK WRR+ +P F RR+ A H PP LGF D + S F TTA
Sbjct: 30 ASLVCKPWRRILTDPAFLRRYRAFHRTPPVLGFLHNVDGNKAISSVPRFVPTTAASPFSP 89
Query: 110 HRFLPEREIGLRWEIVNCCKGLALFRITFRGGCKCKEFMVVDPISGDRRLLPFPLVDGKF 169
P W ++C G L + E MV DPI+GD+ P P +
Sbjct: 90 PAIDPPN----WWWALDCRHGRVLSHL-----FNPMELMVWDPITGDQHRFPLPPHPHAY 140
Query: 170 LSATVVPAAAD-------RRSFRVVAVFAERNTFTSVFASVYSSDAGVWSDYVSRLCLPW 222
+ V+ AA+D + F VV V R+ + +A VYSS G WS S + L
Sbjct: 141 CTGAVLCAASDCHHLDCHQGPFLVVFVGTGRHDHS--WACVYSSKTGEWSSQAS-IVLDS 197
Query: 223 EVWVLRPSVLAGNAVHWFLD-GYNVLMFDLESQKLGFSELPL 263
V +L PSVLA N ++++ + G +L +D+ +L + PL
Sbjct: 198 YVEML-PSVLAENTLYFYCEYGTKILGYDIGKHELSEIDPPL 238
>Os10g0139300 Cyclin-like F-box domain containing protein
Length = 425
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 102/376 (27%), Positives = 152/376 (40%), Gaps = 59/376 (15%)
Query: 52 SAVCKRWRRLAFEPGFRRRFVARHE----PPFLGFFFPYD--------FDPVFSFNAGFR 99
S V +R+RR+ F RRF H P +GFF ++ F PV G
Sbjct: 49 SLVSRRFRRVVTSRRFLRRFSDLHGGAPGAPLVGFFSNHNHGPWADTRFIPVGVDGTGDS 108
Query: 100 STTAQHHLPAHRFL-PEREIGL----RWEIVNCCKGLALFRITFRGGCKCKEFMVVDPIS 154
+ A P + L W ++ C G L R +V++P+
Sbjct: 109 RRSRCRSRRATAARNPGGVLALGDDAEWHVIGCRGGRVLLLSPTR-----LRLLVLEPML 163
Query: 155 GDRRLLPFPLVD----GKFLSATVVPAAADRRS-------FRVVAVFAERNTFTSVFASV 203
G R+ +P P F +A VV AA FRVV V + T S A V
Sbjct: 164 GRRQYIPAPPAPEYRPAYFSNAAVVSAAGGHDELRLRPHLFRVVFVSSNAATKRST-AFV 222
Query: 204 YSSDAGVWSDYVSRLCLPWEVWVLRPSVLAGNAVHWFLDGYNVLMFDLESQKLGFSELPL 263
Y+S W+ + V RPSVL G ++W L + ++ F+LE+ +L +P
Sbjct: 223 YNSATFRWTKAAATEMS--SVIDGRPSVLIGQTLYWHLISHGLVAFNLETHELHEILVPA 280
Query: 264 DAKDDEDFPHRCRCQIIP--AGDGRLGLAVIVGSTMQLWEREIGDGSDATWLLRRTLQLN 321
DA DD H I+ +G G +GLA + G +QLW +TW LR + L+
Sbjct: 281 DAFDDV---HDANLSIVVPRSGGGGVGLAAVSGYILQLWTLRDYTHGASTWDLRNIVVLD 337
Query: 322 F--------------LPLEAEGRKLI--VGVAEENSSILLWTRVGLFMVHLKFLQVRKVY 365
LP A+ L+ + + E+ + +WT G+F V L + KV
Sbjct: 338 ALLPLRNARLPPPPQLPASAKPMPLVWLMALDEDENVGYVWTAAGVFAVQLDTMNYHKVL 397
Query: 366 GEI--SVDNYYPYSSF 379
G + + +PY SF
Sbjct: 398 GPVCRGMQFVFPYKSF 413
>Os10g0144800 Cyclin-like F-box domain containing protein
Length = 401
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 94/361 (26%), Positives = 142/361 (39%), Gaps = 64/361 (17%)
Query: 46 STLPTASAVCKRWRRLAFEPGFRRRFVARHE--PPFLGFFFPYDFDPVFSFNAGFRSTTA 103
L ASAVC WRR+ + F RR H P GFF VF G
Sbjct: 32 QALARASAVCPEWRRVVRDAAFLRRHRELHGGVPATAGFF---HNTVVFGGAPGGARFVC 88
Query: 104 QHHLPAHRFLPER-------------EIGLRWEIVNCCKGLALFRITFRGGCKCK-EFMV 149
P +P G W +++C G L G C+ F+V
Sbjct: 89 AGAGPLALSVPPSVSRQGVPCCHTHVNPGDAWTVLDCRGGRVLL-----GCCRFSCYFLV 143
Query: 150 VDPISGDRRLLP------FPLVDGKFLSATVVPAAADRRS---FRVVAVFAERNTFTSVF 200
+PI+G R L+ L +AT++ D + FRV AV+ +F
Sbjct: 144 YNPITGKRCLVKAASHKRLHLHHSIRCNATLICDDDDADADGPFRVAAVYTTVTDGGRLF 203
Query: 201 ASVYSSDAGVWSDYVSRLC-LPWEVWVL-RPSVLAGNAVHWFLDGYNVLMFDLESQKLGF 258
+ + S G W+ LP + + PS + G+ + Y VL FD+E +
Sbjct: 204 GAAFLSRTGRWTTAPQVFVDLPRGIDLRGEPSAVVGSTAYLSAYSYLVLAFDVEHWTMAT 263
Query: 259 SELPLDAKDDEDFPHRCRCQIIPAGDGRLGLAVIVGSTMQLWEREIGDGSDATWLLRRTL 318
+ P + R GDG LGL + T++LW RE G W+LR T+
Sbjct: 264 FQRPPRCGNARLMKTR--------GDGVLGLVGALELTVRLWAREAGG-----WVLRSTV 310
Query: 319 QLNFL---------PLEAEGRKL-------IVGVAEENSSILLWTRVGLFMVHLKFLQVR 362
+L+ + PL + + I+GVAEE ++ LWT +G+FM ++++
Sbjct: 311 ELSDMGLLRDLPSAPLPSSDARFPLLPPVKIIGVAEEGDAVFLWTMLGIFMFCPGSMELK 370
Query: 363 K 363
K
Sbjct: 371 K 371
>Os06g0249700
Length = 371
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 98/346 (28%), Positives = 144/346 (41%), Gaps = 39/346 (11%)
Query: 52 SAVCKRWRRLAFEPGFRRRFVARH-EPPFLGFFFPYDFDPVFSFNAGFRSTTAQHHLPAH 110
SAVCK WRRL F R+ A H PP LGFF + F++ R+T+ +
Sbjct: 41 SAVCKPWRRLLSGRIFLSRYHALHLAPPILGFFC-EEKALTGPFSSFVRTTSFR------ 93
Query: 111 RFLPEREIGLRWEIVNCC---KGLALFRITFRGGCKCKEFMVVDPISGDRRLLPFPL--V 165
+P+R G + C G ALF + +V+DPI+G R L L V
Sbjct: 94 PIIPDRGGGGGDGWLIPCDSRHGRALFITQ-----PPLQLLVLDPITGMERPLAAVLCAV 148
Query: 166 DGKFLSATVVPAAADRRSFRVVAVFAERNTFTSVFASVYSSDAGVWSDYVSRLCLP-WEV 224
DG R++RV A+ + A+VYSS+ WSD S P V
Sbjct: 149 DGCGHHD------CHGRAYRV-ALVGTDVAGGATHAAVYSSETYAWSDPTSIDHHPNARV 201
Query: 225 WVLRPSVLAGNAVHWFLDGYNVLMFDLESQKLGFSELPLDAKDDEDFPHRCRCQIIPAGD 284
RPSVL GNA +FL N + + + + S +P C ++ A
Sbjct: 202 QARRPSVLVGNARLYFLCDNNTSIVEFDMATMTLSVIPSPPLAGPGHEEVCGALLVTAEG 261
Query: 285 GRLGLAVIVGS--TMQLWEREIGDGS--------DATWLLRRTLQLNFLPLEAEGRKLIV 334
G LG A I+ T+ W +E D LL T+ ++ + L++
Sbjct: 262 GGLGFAAILKQSRTLHQWSKEEATNQWKHLKHVRDLEHLLPYTVGVHLHDPFSRMSNLLI 321
Query: 335 GVAEENSSILLWTRVGLFMVHLKFLQ-VRKVYGEISVDNYYPYSSF 379
G A+ I++ T G+F V L + +KV ++ +PY SF
Sbjct: 322 GFAD--GVIVVRTHDGVFTVELGSSRPPKKVSRRSAIVAAFPYLSF 365
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.327 0.142 0.458
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 12,827,167
Number of extensions: 568789
Number of successful extensions: 1623
Number of sequences better than 1.0e-10: 21
Number of HSP's gapped: 1573
Number of HSP's successfully gapped: 21
Length of query: 379
Length of database: 17,035,801
Length adjustment: 103
Effective length of query: 276
Effective length of database: 11,657,759
Effective search space: 3217541484
Effective search space used: 3217541484
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 157 (65.1 bits)