Os10g0155300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Cyclin-like F-box domain containing protein.
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Os10g0155300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Cyclin-like F-box domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 35.36 | 0.279 | 9.86 | 0.647 | 2 | -0.963 | 0.856 | 1.64 | 0.0613 | 5.71 | 19.05 | 300 | -- | -- |
| 36.94 | 0.283 | 9.9 | 0.373 | 2.02 | -0.967 | 0.511 | -- | -0.00701 | 5.62 | 16.14 | 358 | -- | -- |
| 36.69 | 0.282 | 9.88 | 0.526 | 2 | -1 | -- | 0.895 | 0.0252 | 5.69 | 17.84 | 317 | -- | -- |
| 37.27 | 0.284 | 9.9 | 0.366 | 2.02 | -1.01 | -- | -- | -0.0196 | 5.64 | 16.41 | 344 | -- | -- |
| 154.94 | 0.58 | 9.84 | 1.13 | -- | -2.84 | -- | 4.72 | 0.247 | -- | 24.29 | 309 | -- | -- |
| 49.62 | 0.33 | 9.93 | 0.127 | 2.33 | -- | 0.647 | -- | -0.18 | 5.6 | -- | -- | -- | -- |
| 50.64 | 0.333 | 9.93 | 0.13 | 2.34 | -- | -- | -- | -0.183 | 5.59 | -- | -- | -- | -- |
| 161.83 | 0.592 | 9.91 | 0.608 | -- | -2.44 | -- | -- | 0.11 | -- | 24.3 | 324 | -- | -- |
| 40.44 | 0.296 | 9.91 | -- | 2.07 | -0.855 | -- | -- | -0.0829 | 5.62 | 16.62 | 341 | -- | -- |
| 333.98 | 0.854 | 9.97 | 0.205 | -- | -- | -- | -- | -0.126 | -- | -- | -- | -- | -- |
| 51.09 | 0.334 | 9.93 | -- | 2.34 | -- | -- | -- | -0.197 | 5.59 | -- | -- | -- | -- |
| 171.27 | 0.61 | 9.93 | -- | -- | -2.36 | -- | -- | 0.0283 | -- | 24.4 | 323 | -- | -- |
| 335.09 | 0.854 | 9.97 | -- | -- | -- | -- | -- | -0.149 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 32.29 | temperature | 15 | 720 | > th | dose dependent | rect. | 21 | 13 |
| 3 | 32.47 | temperature | 15 | 720 | > th | dose dependent | rect. | 22 | 11 |
| 14 | 33.00 | temperature | 15 | 270 | > th | dose dependent | rect. | 4 | 13 |
| 16 | 33.09 | temperature | 20 | 270 | > th | dose dependent | rect. | 21 | 21 |
| 24 | 33.30 | temperature | 15 | 720 | > th | dose dependent | rect. | 5 | 4 |
| 30 | 33.35 | temperature | 10 | 720 | > th | dose dependent | rect. | 22 | 18 |
| 39 | 33.45 | temperature | 10 | 720 | > th | dose dependent | rect. | 4 | 6 |
| 63 | 33.85 | temperature | 15 | 720 | > th | dose dependent | sin | 7 | NA |
| 65 | 33.86 | temperature | 20 | 720 | > th | dose independent | rect. | 22 | 11 |
| 230 | 35.13 | temperature | 20 | 270 | > th | dose dependent | rect. | 12 | 23 |
| 240 | 35.20 | temperature | 15 | 270 | > th | dose dependent | sin | 2 | NA |
| 256 | 35.28 | temperature | 20 | 270 | > th | dose dependent | rect. | 3 | 23 |
| 292 | 35.49 | temperature | 20 | 270 | > th | dose dependent | no | NA | NA |
| 296 | 35.51 | temperature | 20 | 720 | > th | dose independent | sin | 8 | NA |
| 309 | 35.57 | temperature | 30 | 270 | < th | dose dependent | rect. | 24 | 23 |
| 314 | 35.60 | temperature | 30 | 720 | < th | dose dependent | rect. | 1 | 11 |
| 343 | 35.72 | temperature | 30 | 270 | < th | dose dependent | rect. | 7 | 22 |
| 369 | 35.84 | temperature | 30 | 270 | < th | dose dependent | rect. | 16 | 21 |
| 429 | 36.06 | temperature | 20 | 720 | > th | dose independent | rect. | 4 | 5 |
| 439 | 36.10 | temperature | 20 | 720 | > th | dose independent | rect. | 22 | 18 |
| 474 | 36.21 | temperature | 20 | 720 | > th | dose independent | rect. | 6 | 1 |
| 496 | 36.29 | temperature | 30 | 270 | < th | dose dependent | rect. | 7 | 14 |
| 569 | 36.55 | temperature | 30 | 720 | < th | dose dependent | sin | 5 | NA |
| 595 | 36.64 | temperature | 10 | 720 | > th | dose dependent | rect. | 14 | 20 |
| 615 | 36.69 | temperature | 30 | 720 | < th | dose dependent | rect. | 24 | 19 |
| 624 | 36.72 | temperature | 30 | 270 | < th | dose dependent | sin | 0 | NA |
| 638 | 36.76 | temperature | 30 | 270 | < th | dose dependent | no | NA | NA |
| 796 | 37.18 | radiation | 1 | 720 | < th | dose dependent | sin | 11 | NA |
| 806 | 37.23 | radiation | 1 | 720 | < th | dose dependent | rect. | 17 | 18 |
| 900 | 37.43 | radiation | 1 | 14400 | > th | dose independent | rect. | 18 | 12 |
| 981 | 37.53 | temperature | 20 | 1440 | > th | dose dependent | rect. | 17 | 11 |