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Os10g0136200

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Cyclin-like F-box domain containing protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 9.37 (0.0184) R2 : 0.528
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -1.69 (0.0792) R2dE : 0.525 R2E : 0.528
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : 0.00685 (0.0405) R2dN8 : 4.02e-05 R2N8 : 0.00277
σ : 0.341
deviance : 53.31
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C
peak time of C : --
E
wheather : temperature
threshold : 25.06
memory length : 10
response mode : < th
dose dependency : dose dependent
G
type of G : no
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = temperature, response mode = < th, dose dependency = dose dependent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
27.34 0.246 9.34 0.693 0.556 -1.46 0.0574 -0.0723 0.0828 7.06 26.52 22 -- --
27.34 0.244 9.34 0.683 0.558 -1.45 0.0686 -- 0.0818 7.03 26.62 19 -- --
27.34 0.244 9.34 0.694 0.558 -1.46 -- -0.0665 0.0819 7.01 26.6 19 -- --
27.35 0.244 9.34 0.682 0.558 -1.45 -- -- 0.0787 7.01 26.62 19 -- --
41.35 0.301 9.34 0.728 -- -1.48 -- -0.213 0.128 -- 25.06 10 -- --
57.9 0.357 9.27 1.02 0.596 -- 0.257 -- 0.402 9.71 -- -- -- --
58.15 0.357 9.27 1.03 0.595 -- -- -- 0.402 9.66 -- -- -- --
41.43 0.301 9.35 0.696 -- -1.47 -- -- 0.121 -- 25.06 10 -- --
38.87 0.29 9.35 -- 0.554 -1.58 -- -- 0.00808 6.74 26.83 18 -- --
79.16 0.416 9.28 1.03 -- -- -- -- 0.403 -- -- -- -- --
86.19 0.434 9.29 -- 0.593 -- -- -- 0.287 9.53 -- -- -- --
53.31 0.341 9.37 -- -- -1.69 -- -- 0.00685 -- 25.06 10 -- --
106.94 0.483 9.31 -- -- -- -- -- 0.289 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 27.83 temperature 25 720 < th dose dependent rect. 6 19
9 28.08 temperature 10 720 > th dose dependent rect. 11 20
20 28.39 temperature 25 10 < th dose dependent rect. 1 23
28 28.49 temperature 25 10 < th dose dependent rect. 9 23
30 28.50 temperature 25 30 < th dose dependent rect. 7 23
31 28.54 temperature 25 30 < th dose dependent no NA NA
33 28.54 temperature 25 30 < th dose dependent rect. 11 23
34 28.54 temperature 25 30 < th dose dependent rect. 19 23
35 28.54 temperature 25 30 < th dose dependent rect. 23 23
38 28.55 temperature 25 30 < th dose dependent rect. 15 23
39 28.57 temperature 25 30 < th dose dependent rect. 17 23
40 28.57 temperature 25 30 < th dose dependent rect. 21 23
41 28.60 temperature 25 30 < th dose dependent rect. 13 23
65 28.77 temperature 25 30 < th dose dependent rect. 3 23
80 28.92 temperature 25 30 < th dose dependent rect. 5 23
87 28.99 temperature 25 720 < th dose dependent sin 22 NA
143 29.39 temperature 10 720 > th dose dependent rect. 18 22
173 29.48 temperature 25 1440 < th dose dependent rect. 17 23
182 29.51 temperature 25 1440 < th dose dependent no NA NA
199 29.53 temperature 25 1440 < th dose dependent rect. 15 23
212 29.56 temperature 25 1440 < th dose dependent rect. 23 23
222 29.58 temperature 25 1440 < th dose dependent rect. 13 23
229 29.61 temperature 10 720 > th dose dependent rect. 3 21
255 29.68 temperature 25 1440 < th dose dependent sin 17 NA
358 29.94 temperature 25 1440 < th dose dependent rect. 1 15
398 30.04 temperature 25 1440 < th dose dependent sin 3 NA
566 30.42 temperature 25 1440 < th dose dependent rect. 21 2
693 30.74 temperature 10 720 > th dose dependent no NA NA
882 31.31 temperature 10 1440 > th dose dependent rect. 22 2
966 31.45 temperature 10 10 > th dose dependent no NA NA
967 31.45 temperature 10 1440 > th dose dependent rect. 21 5
995 31.48 temperature 15 720 > th dose dependent rect. 23 23