Os10g0136900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os10g0136900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 33.42 | 0.272 | 9.87 | 1.09 | 0.242 | -0.202 | 0.142 | -0.64 | -0.451 | 0.115 | 24.5 | 211 | -- | -- |
| 34.96 | 0.275 | 9.88 | 0.953 | 0.256 | -0.222 | -0.082 | -- | -0.484 | 0.0796 | 24.55 | 123 | -- | -- |
| 33.5 | 0.27 | 9.87 | 1.08 | 0.241 | -0.201 | -- | -0.607 | -0.453 | 0.0873 | 24.5 | 212 | -- | -- |
| 34.82 | 0.275 | 9.89 | 0.92 | 0.237 | -0.225 | -- | -- | -0.502 | 24 | 24.5 | 118 | -- | -- |
| 35.48 | 0.277 | 9.88 | 1.05 | -- | -0.265 | -- | -0.54 | -0.47 | -- | 24.8 | 627 | -- | -- |
| 37.85 | 0.288 | 9.87 | 0.966 | 0.223 | -- | 0.0963 | -- | -0.397 | 21.8 | -- | -- | -- | -- |
| 37.88 | 0.288 | 9.87 | 0.962 | 0.222 | -- | -- | -- | -0.397 | 21.9 | -- | -- | -- | -- |
| 35.9 | 0.279 | 9.89 | 0.866 | -- | -0.318 | -- | -- | -0.513 | -- | 24.9 | 747 | -- | -- |
| 55.43 | 0.347 | 9.93 | -- | 0.247 | -0.334 | -- | -- | -0.625 | 1.44 | 24.3 | 219 | -- | -- |
| 40.85 | 0.299 | 9.86 | 0.964 | -- | -- | -- | -- | -0.397 | -- | -- | -- | -- | -- |
| 62.26 | 0.369 | 9.89 | -- | 0.226 | -- | -- | -- | -0.504 | 22.3 | -- | -- | -- | -- |
| 54 | 0.342 | 9.92 | -- | -- | -0.494 | -- | -- | -0.672 | -- | 24.79 | 819 | -- | -- |
| 65.38 | 0.377 | 9.89 | -- | -- | -- | -- | -- | -0.504 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 31.60 | temperature | 25.0 | 1440 | > th | dose independent | rect. | 24 | 1 |
| 2 | 31.61 | temperature | 25.0 | 270 | < th | dose independent | rect. | 13 | 18 |
| 12 | 31.94 | temperature | 25.0 | 1440 | < th | dose independent | rect. | 24 | 3 |
| 24 | 32.15 | wind | 3.0 | 14400 | < th | dose independent | rect. | 2 | 1 |
| 34 | 32.36 | wind | 3.0 | 14400 | > th | dose independent | rect. | 2 | 1 |
| 51 | 32.61 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 4 | 1 |
| 53 | 32.62 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 5 | 1 |
| 58 | 32.66 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 2 | 1 |
| 69 | 32.73 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 2 | 3 |
| 77 | 32.76 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 1 | 1 |
| 83 | 32.78 | atmosphere | 1005.0 | 14400 | < th | dose independent | rect. | 23 | 1 |
| 90 | 32.80 | temperature | 25.0 | 270 | < th | dose independent | sin | 12 | NA |
| 103 | 32.84 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 21 | 8 |
| 104 | 32.85 | wind | 9.0 | 14400 | < th | dose independent | rect. | 8 | 3 |
| 105 | 32.85 | temperature | 25.0 | 270 | > th | dose independent | rect. | 22 | 8 |
| 107 | 32.85 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 24 | 3 |
| 112 | 32.87 | humidity | 80.0 | 14400 | < th | dose dependent | rect. | 5 | 1 |
| 113 | 32.88 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 14 | 17 |
| 115 | 32.90 | temperature | 20.0 | 720 | > th | dose independent | rect. | 5 | 2 |
| 119 | 32.92 | wind | 9.0 | 14400 | < th | dose independent | rect. | 10 | 1 |
| 128 | 32.94 | temperature | 25.0 | 1440 | > th | dose dependent | rect. | 24 | 1 |
| 129 | 32.94 | humidity | 80.0 | 14400 | < th | dose dependent | rect. | 2 | 1 |
| 130 | 32.94 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 23 | 5 |
| 136 | 32.96 | temperature | 30.0 | 270 | < th | dose dependent | rect. | 14 | 15 |
| 145 | 32.99 | temperature | 25.0 | 270 | > th | dose independent | rect. | 11 | 19 |
| 158 | 33.03 | temperature | 25.0 | 720 | < th | dose dependent | rect. | 16 | 2 |
| 169 | 33.06 | humidity | 80.0 | 14400 | < th | dose dependent | rect. | 2 | 4 |
| 175 | 33.07 | temperature | 25.0 | 270 | > th | dose independent | rect. | 19 | 11 |
| 194 | 33.11 | wind | 1.0 | 14400 | > th | dose independent | rect. | 9 | 2 |
| 205 | 33.12 | temperature | 25.0 | 720 | < th | dose dependent | rect. | 13 | 6 |
| 221 | 33.15 | wind | 9.0 | 14400 | > th | dose independent | rect. | 7 | 4 |
| 247 | 33.19 | wind | 9.0 | 14400 | > th | dose independent | rect. | 9 | 2 |
| 252 | 33.19 | temperature | 20.0 | 720 | > th | dose dependent | rect. | 6 | 2 |
| 301 | 33.29 | temperature | 20.0 | 90 | > th | dose dependent | rect. | 11 | 16 |
| 311 | 33.31 | wind | 9.0 | 14400 | > th | dose dependent | rect. | 12 | 1 |
| 363 | 33.40 | wind | 7.0 | 14400 | > th | dose dependent | rect. | 10 | 1 |
| 381 | 33.42 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 6 | 22 |
| 398 | 33.46 | temperature | 20.0 | 90 | > th | dose dependent | rect. | 6 | 21 |
| 404 | 33.47 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 16 | 18 |
| 408 | 33.48 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 6 | 5 |
| 415 | 33.48 | temperature | 20.0 | 90 | > th | dose dependent | rect. | 9 | 18 |
| 417 | 33.49 | temperature | 25.0 | 270 | > th | dose independent | sin | 14 | NA |
| 431 | 33.50 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 8 | 20 |
| 465 | 33.54 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 17 | 1 |
| 483 | 33.57 | wind | 1.0 | 14400 | < th | dose independent | rect. | 9 | 2 |
| 485 | 33.57 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 6 | 5 |
| 495 | 33.58 | atmosphere | 1005.0 | 14400 | > th | dose independent | rect. | 23 | 1 |
| 506 | 33.59 | temperature | 20.0 | 1440 | > th | dose independent | rect. | 20 | 11 |
| 542 | 33.62 | wind | 3.0 | 14400 | < th | dose independent | rect. | 24 | 11 |
| 543 | 33.62 | humidity | 70.0 | 1440 | > th | dose dependent | rect. | 9 | 1 |
| 547 | 33.62 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 21 | 16 |
| 549 | 33.62 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 11 | 17 |
| 569 | 33.64 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 17 | 1 |
| 575 | 33.64 | wind | 3.0 | 14400 | < th | dose independent | rect. | 24 | 13 |
| 588 | 33.65 | temperature | 20.0 | 1440 | < th | dose independent | rect. | 20 | 10 |
| 624 | 33.67 | wind | 3.0 | 43200 | < th | dose dependent | sin | 10 | NA |
| 625 | 33.67 | wind | 7.0 | 14400 | > th | dose dependent | rect. | 10 | 3 |
| 627 | 33.67 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 10 | 14 |
| 642 | 33.68 | wind | 3.0 | 14400 | > th | dose independent | rect. | 24 | 13 |
| 695 | 33.71 | temperature | 30.0 | 10 | < th | dose dependent | rect. | 16 | 14 |
| 716 | 33.73 | wind | 3.0 | 14400 | < th | dose independent | rect. | 19 | 12 |
| 744 | 33.75 | temperature | 20.0 | 270 | > th | dose dependent | rect. | 19 | 8 |
| 752 | 33.76 | wind | 3.0 | 14400 | < th | dose independent | sin | 8 | NA |
| 787 | 33.78 | temperature | 20.0 | 1440 | < th | dose independent | rect. | 5 | 1 |
| 820 | 33.80 | wind | 9.0 | 14400 | < th | dose independent | rect. | 5 | 9 |
| 834 | 33.81 | temperature | 25.0 | 270 | < th | dose independent | rect. | 21 | 10 |
| 844 | 33.81 | temperature | 25.0 | 270 | < th | dose independent | rect. | 24 | 23 |
| 854 | 33.82 | humidity | 70.0 | 1440 | > th | dose independent | rect. | 9 | 3 |
| 872 | 33.83 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 17 | 1 |
| 875 | 33.83 | wind | 9.0 | 14400 | < th | dose independent | rect. | 8 | 6 |
| 887 | 33.83 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 17 | 1 |
| 895 | 33.84 | wind | 3.0 | 14400 | > th | dose independent | sin | 7 | NA |
| 897 | 33.84 | wind | 9.0 | 14400 | < th | dose independent | rect. | 10 | 4 |
| 925 | 33.85 | wind | 9.0 | 14400 | < th | dose independent | rect. | 2 | 12 |
| 967 | 33.87 | wind | 3.0 | 14400 | > th | dose independent | rect. | 19 | 12 |
| 977 | 33.87 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 13 | 15 |