Os10g0145100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Cyclin-like F-box domain containing protein.
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Os10g0145100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Cyclin-like F-box domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 54.56 | 0.347 | 7.27 | 0.462 | 0.485 | -0.742 | 0.69 | -0.766 | 0.222 | 20.6 | 79 | 1348 | -- | -- |
| 55.06 | 0.346 | 7.26 | 0.527 | 0.491 | -0.781 | 0.689 | -- | 0.232 | 20.6 | 78.31 | 1333 | -- | -- |
| 55.42 | 0.347 | 7.26 | 0.487 | 0.505 | -0.641 | -- | -0.439 | 0.253 | 20.5 | 76 | 1332 | -- | -- |
| 55.78 | 0.348 | 7.25 | 0.543 | 0.51 | -0.685 | -- | -- | 0.269 | 20.8 | 75.88 | 1303 | -- | -- |
| 68.74 | 0.386 | 7.25 | 0.468 | -- | -0.637 | -- | -0.577 | 0.233 | -- | 76 | 1408 | -- | -- |
| 62.71 | 0.371 | 7.27 | 0.485 | 0.497 | -- | 0.727 | -- | 0.198 | 20.1 | -- | -- | -- | -- |
| 64.29 | 0.375 | 7.27 | 0.464 | 0.496 | -- | -- | -- | 0.198 | 20.2 | -- | -- | -- | -- |
| 69.19 | 0.387 | 7.24 | 0.536 | -- | -0.673 | -- | -- | 0.251 | -- | 75.95 | 1408 | -- | -- |
| 63.51 | 0.371 | 7.27 | -- | 0.492 | -0.671 | -- | -- | 0.188 | 20.8 | 76.99 | 1314 | -- | -- |
| 77.83 | 0.412 | 7.26 | 0.46 | -- | -- | -- | -- | 0.192 | -- | -- | -- | -- | -- |
| 69.96 | 0.391 | 7.28 | -- | 0.493 | -- | -- | -- | 0.147 | 20.2 | -- | -- | -- | -- |
| 76.17 | 0.406 | 7.25 | -- | -- | -0.675 | -- | -- | 0.194 | -- | 78.91 | 1383 | -- | -- |
| 83.41 | 0.426 | 7.27 | -- | -- | -- | -- | -- | 0.141 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 52.77 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 1 | 13 |
| 10 | 52.95 | humidity | 80.0 | 1440 | < th | dose independent | sin | 5 | NA |
| 11 | 52.96 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 1 | 13 |
| 41 | 53.20 | humidity | 70.0 | 1440 | > th | dose dependent | rect. | 4 | 10 |
| 43 | 53.21 | humidity | 70.0 | 1440 | > th | dose dependent | rect. | 11 | 1 |
| 51 | 53.25 | humidity | 80.0 | 1440 | > th | dose independent | sin | 4 | NA |
| 61 | 53.31 | wind | 9.0 | 14400 | < th | dose independent | rect. | 6 | 5 |
| 71 | 53.34 | wind | 9.0 | 14400 | > th | dose independent | rect. | 10 | 1 |
| 101 | 53.49 | wind | 9.0 | 14400 | < th | dose independent | rect. | 10 | 1 |
| 117 | 53.59 | wind | 3.0 | 14400 | < th | dose independent | rect. | 3 | 1 |
| 119 | 53.62 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 4 | 2 |
| 144 | 53.72 | humidity | 70.0 | 1440 | > th | dose dependent | sin | 3 | NA |
| 146 | 53.73 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 4 | 1 |
| 159 | 53.79 | wind | 9.0 | 14400 | > th | dose independent | rect. | 7 | 4 |
| 170 | 53.83 | humidity | 70.0 | 1440 | > th | dose dependent | rect. | 9 | 4 |
| 235 | 54.06 | wind | 3.0 | 14400 | > th | dose independent | rect. | 3 | 1 |
| 289 | 54.22 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 11 | 1 |
| 298 | 54.25 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 23 | 8 |
| 301 | 54.27 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 11 | 1 |
| 304 | 54.27 | wind | 7.0 | 14400 | > th | dose dependent | rect. | 10 | 1 |
| 359 | 54.42 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 10 | 3 |
| 370 | 54.45 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 17 | 1 |
| 379 | 54.47 | temperature | 25.0 | 270 | < th | dose independent | rect. | 1 | 6 |
| 399 | 54.52 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 10 | 3 |
| 405 | 54.53 | humidity | 80.0 | 14400 | < th | dose dependent | rect. | 5 | 1 |
| 424 | 54.58 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 21 | 10 |
| 440 | 54.62 | wind | 7.0 | 14400 | > th | dose dependent | rect. | 12 | 1 |
| 446 | 54.64 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 17 | 1 |
| 459 | 54.66 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 23 | 13 |
| 486 | 54.71 | humidity | 90.0 | 1440 | < th | dose dependent | sin | 6 | NA |
| 512 | 54.76 | humidity | 90.0 | 1440 | < th | dose dependent | rect. | 1 | 10 |
| 534 | 54.80 | wind | 7.0 | 14400 | > th | dose independent | rect. | 12 | 1 |
| 536 | 54.80 | wind | 3.0 | 43200 | < th | dose independent | rect. | 1 | 6 |
| 558 | 54.82 | humidity | 80.0 | 14400 | < th | dose dependent | rect. | 2 | 5 |
| 577 | 54.84 | humidity | 90.0 | 1440 | < th | dose dependent | rect. | 5 | 3 |
| 591 | 54.86 | wind | 3.0 | 43200 | > th | dose independent | rect. | 5 | 2 |
| 593 | 54.86 | humidity | 60.0 | 14400 | < th | dose independent | rect. | 15 | 2 |
| 601 | 54.87 | wind | 3.0 | 43200 | < th | dose independent | rect. | 5 | 2 |
| 613 | 54.88 | wind | 7.0 | 14400 | > th | dose dependent | rect. | 10 | 3 |
| 628 | 54.90 | wind | 1.0 | 43200 | < th | dose dependent | rect. | 5 | 1 |
| 673 | 54.97 | wind | 3.0 | 14400 | < th | dose dependent | rect. | 3 | 2 |
| 686 | 54.99 | wind | 3.0 | 43200 | > th | dose independent | rect. | 1 | 6 |
| 689 | 54.99 | wind | 3.0 | 43200 | < th | dose dependent | sin | 7 | NA |
| 706 | 55.01 | humidity | 80.0 | 14400 | < th | dose dependent | rect. | 2 | 1 |
| 739 | 55.04 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 15 | 1 |
| 740 | 55.04 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 15 | 3 |
| 743 | 55.04 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 15 | 1 |
| 749 | 55.05 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 17 | 1 |
| 750 | 55.05 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 17 | 1 |
| 775 | 55.08 | precipitation | 0.1 | 14400 | > th | dose independent | rect. | 15 | 1 |
| 782 | 55.08 | precipitation | 0.1 | 14400 | > th | dose dependent | rect. | 15 | 1 |
| 790 | 55.09 | humidity | 70.0 | 14400 | > th | dose independent | rect. | 11 | 1 |
| 791 | 55.09 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 1 | 2 |
| 797 | 55.10 | temperature | 20.0 | 270 | > th | dose independent | rect. | 7 | 18 |
| 814 | 55.12 | wind | 3.0 | 43200 | < th | dose independent | rect. | 1 | 13 |
| 832 | 55.14 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 15 | 10 |
| 837 | 55.14 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 15 | 17 |
| 838 | 55.14 | humidity | 60.0 | 14400 | < th | dose independent | rect. | 15 | 17 |
| 843 | 55.14 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 3 | 10 |
| 850 | 55.15 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 15 | 5 |
| 852 | 55.15 | humidity | 60.0 | 14400 | < th | dose independent | rect. | 15 | 6 |
| 957 | 55.23 | wind | 3.0 | 43200 | < th | dose dependent | rect. | 4 | 8 |