Os02g0249700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Cyclin-like F-box domain containing protein.
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Os02g0249700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Cyclin-like F-box domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 259.1 | 0.756 | 6.37 | -1.03 | 2.19 | 0.369 | 0.721 | 4.44 | -0.0235 | 17.8 | 20.18 | 8 | -- | -- |
| 275.09 | 0.772 | 6.46 | -1.82 | 1.99 | 0.768 | 1.3 | -- | -0.219 | 17.8 | 17.94 | 134 | -- | -- |
| 260.24 | 0.751 | 6.36 | -0.974 | 2.2 | 0.292 | -- | 4.79 | 0.00809 | 17.7 | 20.58 | 7 | -- | -- |
| 278.18 | 0.777 | 6.47 | -1.88 | 2.1 | 1.04 | -- | -- | -0.29 | 17.8 | 14.2 | 120 | -- | -- |
| 423.97 | 0.959 | 6.42 | -1.72 | -- | 2.93 | -- | 4.07 | -0.433 | -- | 14.1 | 307 | -- | -- |
| 282.58 | 0.788 | 6.44 | -1.65 | 2.33 | -- | 1.64 | -- | -0.143 | 17.5 | -- | -- | -- | -- |
| 289.17 | 0.796 | 6.44 | -1.65 | 2.34 | -- | -- | -- | -0.136 | 17.5 | -- | -- | -- | -- |
| 415.52 | 0.949 | 6.45 | -2.11 | -- | 2.34 | -- | -- | -0.406 | -- | 24.45 | 327 | -- | -- |
| 360.71 | 0.885 | 6.4 | -- | 2.31 | 0.141 | -- | -- | 0.0263 | 17.5 | 19.6 | 323 | -- | -- |
| 573.65 | 1.12 | 6.4 | -1.73 | -- | -- | -- | -- | -0.193 | -- | -- | -- | -- | -- |
| 361.09 | 0.889 | 6.39 | -- | 2.37 | -- | -- | -- | 0.0476 | 17.5 | -- | -- | -- | -- |
| 529.7 | 1.07 | 6.39 | -- | -- | 2.04 | -- | -- | -0.132 | -- | 24.69 | 326 | -- | -- |
| 652.46 | 1.19 | 6.36 | -- | -- | -- | -- | -- | -0.0014 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 242.91 | wind | 3.0 | 14400 | > th | dose independent | rect. | 2 | 1 |
| 2 | 244.01 | humidity | 80.0 | 14400 | < th | dose dependent | rect. | 4 | 1 |
| 7 | 244.66 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 4 | 1 |
| 8 | 244.66 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 4 | 1 |
| 21 | 245.57 | wind | 3.0 | 14400 | < th | dose independent | rect. | 2 | 1 |
| 82 | 247.85 | wind | 9.0 | 14400 | < th | dose independent | rect. | 12 | 2 |
| 86 | 247.96 | wind | 9.0 | 14400 | < th | dose independent | rect. | 3 | 11 |
| 101 | 248.41 | wind | 9.0 | 14400 | > th | dose independent | rect. | 3 | 11 |
| 107 | 248.61 | wind | 9.0 | 14400 | > th | dose independent | rect. | 13 | 1 |
| 114 | 248.68 | wind | 9.0 | 14400 | > th | dose independent | rect. | 24 | 14 |
| 118 | 248.83 | humidity | 80.0 | 14400 | < th | dose independent | rect. | 24 | 1 |
| 123 | 248.88 | wind | 9.0 | 14400 | < th | dose independent | rect. | 10 | 4 |
| 142 | 249.39 | wind | 9.0 | 14400 | > th | dose independent | rect. | 10 | 4 |
| 155 | 249.66 | wind | 5.0 | 4320 | < th | dose independent | rect. | 20 | 1 |
| 163 | 249.95 | wind | 9.0 | 14400 | > th | dose dependent | rect. | 3 | 12 |
| 185 | 250.36 | wind | 9.0 | 14400 | > th | dose dependent | rect. | 10 | 5 |
| 188 | 250.40 | temperature | 25.0 | 4320 | > th | dose independent | rect. | 23 | 1 |
| 194 | 250.50 | wind | 9.0 | 14400 | > th | dose independent | sin | 4 | NA |
| 202 | 250.66 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 19 | 12 |
| 218 | 250.80 | atmosphere | 1010.0 | 10 | < th | dose dependent | rect. | 13 | 16 |
| 223 | 250.88 | temperature | 25.0 | 4320 | < th | dose independent | rect. | 23 | 2 |
| 238 | 251.19 | humidity | 80.0 | 14400 | > th | dose independent | rect. | 22 | 10 |
| 247 | 251.27 | wind | 9.0 | 14400 | < th | dose independent | sin | 4 | NA |
| 249 | 251.28 | temperature | 25.0 | 4320 | < th | dose independent | rect. | 22 | 5 |
| 263 | 251.44 | wind | 5.0 | 4320 | > th | dose independent | rect. | 20 | 1 |
| 283 | 251.69 | wind | 9.0 | 14400 | > th | dose dependent | rect. | 13 | 1 |
| 327 | 252.25 | wind | 3.0 | 14400 | > th | dose independent | rect. | 1 | 6 |
| 370 | 252.81 | humidity | 50.0 | 1440 | > th | dose dependent | rect. | 2 | 8 |
| 407 | 253.16 | wind | 3.0 | 14400 | < th | dose independent | rect. | 1 | 6 |
| 439 | 253.56 | atmosphere | 1010.0 | 10 | < th | dose dependent | rect. | 13 | 21 |
| 451 | 253.68 | wind | 9.0 | 14400 | > th | dose dependent | sin | 4 | NA |
| 492 | 254.25 | atmosphere | 1010.0 | 10 | < th | dose dependent | rect. | 13 | 19 |
| 494 | 254.29 | humidity | 80.0 | 1440 | > th | dose independent | rect. | 24 | 14 |
| 496 | 254.30 | humidity | 80.0 | 1440 | < th | dose independent | rect. | 24 | 14 |
| 511 | 254.44 | humidity | 90.0 | 1440 | < th | dose dependent | rect. | 2 | 8 |
| 556 | 254.80 | humidity | 80.0 | 4320 | > th | dose dependent | rect. | 8 | 2 |
| 570 | 254.93 | temperature | 20.0 | 720 | > th | dose independent | rect. | 12 | 12 |
| 597 | 255.07 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 6 | 2 |
| 604 | 255.11 | wind | 3.0 | 4320 | > th | dose dependent | rect. | 20 | 1 |
| 646 | 255.45 | wind | 1.0 | 43200 | < th | dose independent | rect. | 20 | 3 |
| 683 | 255.68 | temperature | 20.0 | 90 | > th | dose independent | rect. | 21 | 20 |
| 694 | 255.76 | temperature | 20.0 | 90 | > th | dose dependent | rect. | 19 | 22 |
| 707 | 255.84 | wind | 1.0 | 43200 | < th | dose independent | rect. | 18 | 9 |
| 708 | 255.84 | humidity | 60.0 | 14400 | > th | dose independent | rect. | 20 | 12 |
| 709 | 255.84 | temperature | 20.0 | 90 | > th | dose independent | rect. | 12 | 17 |
| 718 | 255.88 | temperature | 25.0 | 90 | < th | dose dependent | rect. | 24 | 23 |
| 741 | 255.99 | wind | 3.0 | 14400 | > th | dose independent | rect. | 5 | 2 |
| 750 | 256.02 | temperature | 20.0 | 270 | > th | dose independent | rect. | 19 | 22 |
| 763 | 256.14 | temperature | 20.0 | 90 | > th | dose dependent | rect. | 21 | 20 |
| 774 | 256.18 | temperature | 20.0 | 1440 | > th | dose dependent | rect. | 1 | 3 |
| 778 | 256.20 | temperature | 20.0 | 1440 | > th | dose dependent | rect. | 1 | 1 |
| 781 | 256.21 | temperature | 25.0 | 10 | < th | dose dependent | rect. | 24 | 23 |
| 797 | 256.32 | temperature | 10.0 | 270 | > th | dose dependent | rect. | 18 | 22 |
| 806 | 256.35 | temperature | 20.0 | 1440 | > th | dose dependent | rect. | 3 | 1 |
| 836 | 256.51 | wind | 3.0 | 14400 | > th | dose independent | rect. | 1 | 10 |
| 874 | 256.64 | wind | 9.0 | 14400 | > th | dose independent | rect. | 15 | 1 |
| 886 | 256.66 | precipitation | 0.1 | 14400 | < th | dose independent | rect. | 17 | 1 |
| 887 | 256.66 | precipitation | 0.1 | 14400 | < th | dose dependent | rect. | 17 | 1 |
| 892 | 256.69 | temperature | 20.0 | 90 | > th | dose independent | rect. | 21 | 22 |
| 901 | 256.73 | atmosphere | 1005.0 | 43200 | < th | dose independent | rect. | 10 | 1 |
| 917 | 256.79 | atmosphere | 1000.0 | 270 | > th | dose independent | rect. | 15 | 21 |
| 974 | 257.01 | wind | 3.0 | 14400 | < th | dose independent | rect. | 1 | 10 |
| 983 | 257.02 | temperature | 20.0 | 10 | > th | dose dependent | rect. | 21 | 21 |
| 988 | 257.04 | temperature | 20.0 | 30 | > th | dose dependent | rect. | 7 | 21 |
| 996 | 257.09 | humidity | 80.0 | 4320 | > th | dose independent | rect. | 9 | 1 |
| 998 | 257.09 | atmosphere | 1000.0 | 270 | > th | dose independent | rect. | 14 | 23 |