Os10g0144800
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Cyclin-like F-box domain containing protein.
FiT-DB / Search/ Help/ Sample detail
|
Os10g0144800 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Cyclin-like F-box domain containing protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = wind,
response mode = > th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 152.6 | 0.58 | 2.87 | 0.117 | 0.0729 | 1.45 | -0.376 | 0.849 | 0.0545 | 12.3 | 9 | 267 | -- | -- |
| 152.63 | 0.575 | 2.87 | 0.116 | 0.0673 | 1.25 | -0.357 | -- | 0.0563 | 12.2 | 9.038 | 267 | -- | -- |
| 153.05 | 0.576 | 2.87 | 0.103 | 0.0885 | 1.37 | -- | 0.308 | 0.0551 | 9.73 | 9.1 | 268 | -- | -- |
| 153.04 | 0.576 | 2.87 | 0.098 | 0.0901 | 1.29 | -- | -- | 0.0537 | 9.84 | 9.01 | 268 | -- | -- |
| 150.37 | 0.571 | 2.87 | 0.0835 | -- | 1.6 | -- | 0.952 | 0.0457 | -- | 10.8 | 345 | -- | -- |
| 157.65 | 0.589 | 2.87 | 0.0182 | 0.0806 | -- | -0.58 | -- | 0.0228 | 14.5 | -- | -- | -- | -- |
| 158.7 | 0.59 | 2.87 | 0.00243 | 0.0918 | -- | -- | -- | 0.0187 | 12.1 | -- | -- | -- | -- |
| 150.6 | 0.572 | 2.87 | 0.0797 | -- | 1.34 | -- | -- | 0.045 | -- | 10.85 | 309 | -- | -- |
| 153.29 | 0.577 | 2.87 | -- | 0.0895 | 1.24 | -- | -- | 0.0422 | 9.85 | 9.075 | 268 | -- | -- |
| 159.23 | 0.59 | 2.88 | -0.000469 | -- | -- | -- | -- | 0.0174 | -- | -- | -- | -- | -- |
| 158.7 | 0.589 | 2.87 | -- | 0.0918 | -- | -- | -- | 0.0185 | 12.1 | -- | -- | -- | -- |
| 150.76 | 0.572 | 2.87 | -- | -- | 1.31 | -- | -- | 0.0358 | -- | 10.87 | 310 | -- | -- |
| 159.23 | 0.589 | 2.88 | -- | -- | -- | -- | -- | 0.0175 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 146.97 | wind | 9 | 90 | > th | dose independent | rect. | 15 | 1 |
| 3 | 146.97 | wind | 9 | 90 | > th | dose dependent | rect. | 15 | 1 |
| 5 | 146.98 | wind | 9 | 10 | > th | dose independent | rect. | 15 | 1 |
| 13 | 146.98 | wind | 9 | 10 | > th | dose dependent | rect. | 15 | 1 |
| 22 | 147.44 | humidity | 70 | 30 | < th | dose independent | rect. | 19 | 1 |
| 37 | 148.33 | atmosphere | 1000 | 10 | < th | dose independent | rect. | 7 | 1 |
| 44 | 148.33 | atmosphere | 1000 | 10 | < th | dose dependent | rect. | 7 | 1 |
| 83 | 149.41 | humidity | 70 | 90 | < th | dose dependent | rect. | 19 | 1 |
| 145 | 150.75 | wind | 9 | 270 | > th | dose dependent | rect. | 18 | 22 |
| 148 | 150.90 | wind | 9 | 270 | > th | dose dependent | rect. | 21 | 19 |
| 154 | 150.96 | wind | 9 | 270 | > th | dose independent | rect. | 12 | 11 |
| 182 | 151.03 | wind | 9 | 270 | > th | dose independent | rect. | 18 | 22 |
| 183 | 151.03 | wind | 9 | 270 | > th | dose dependent | rect. | 12 | 11 |
| 202 | 151.16 | wind | 9 | 270 | > th | dose independent | rect. | 20 | 20 |
| 292 | 151.96 | radiation | 10 | 14400 | < th | dose dependent | rect. | 19 | 1 |
| 322 | 152.10 | temperature | 10 | 1440 | > th | dose independent | rect. | 19 | 1 |
| 325 | 152.10 | temperature | 30 | 1440 | < th | dose independent | rect. | 19 | 1 |
| 329 | 152.10 | humidity | 50 | 1440 | > th | dose independent | rect. | 19 | 1 |
| 331 | 152.10 | atmosphere | 995 | 1440 | > th | dose independent | rect. | 19 | 1 |
| 335 | 152.10 | radiation | 1 | 1440 | < th | dose independent | rect. | 19 | 1 |
| 358 | 152.10 | temperature | 10 | 1440 | > th | dose independent | rect. | 20 | 23 |
| 390 | 152.20 | wind | 9 | 270 | > th | dose independent | sin | 0 | NA |
| 409 | 152.29 | wind | 9 | 270 | < th | dose independent | sin | 0 | NA |
| 471 | 152.42 | wind | 9 | 270 | > th | dose dependent | sin | 2 | NA |
| 522 | 152.59 | radiation | 10 | 1440 | > th | dose independent | rect. | 17 | 13 |
| 541 | 152.65 | humidity | 60 | 14400 | < th | dose independent | rect. | 16 | 17 |
| 546 | 152.66 | wind | 9 | 270 | < th | dose independent | sin | 15 | NA |
| 628 | 152.72 | wind | 9 | 270 | > th | dose independent | no | NA | NA |
| 634 | 152.72 | humidity | 60 | 14400 | > th | dose independent | rect. | 17 | 16 |
| 676 | 152.73 | radiation | 10 | 1440 | > th | dose independent | rect. | 17 | 1 |
| 704 | 152.74 | wind | 9 | 270 | > th | dose independent | sin | 16 | NA |
| 721 | 152.76 | temperature | 25 | 30 | > th | dose dependent | rect. | 19 | 14 |
| 769 | 152.82 | atmosphere | 1005 | 30 | > th | dose independent | rect. | 19 | 1 |
| 771 | 152.82 | temperature | 25 | 30 | > th | dose dependent | rect. | 19 | 1 |
| 777 | 152.83 | humidity | 60 | 14400 | < th | dose independent | rect. | 16 | 4 |
| 787 | 152.83 | wind | 9 | 270 | > th | dose dependent | sin | 14 | NA |
| 788 | 152.84 | humidity | 60 | 14400 | > th | dose independent | rect. | 16 | 4 |
| 795 | 152.84 | humidity | 60 | 14400 | > th | dose independent | rect. | 16 | 9 |
| 804 | 152.84 | humidity | 60 | 14400 | > th | dose independent | rect. | 16 | 14 |
| 846 | 152.90 | humidity | 70 | 14400 | < th | dose dependent | rect. | 17 | 16 |
| 860 | 152.95 | humidity | 70 | 4320 | < th | dose dependent | rect. | 16 | 1 |
| 867 | 152.97 | humidity | 60 | 14400 | < th | dose dependent | rect. | 16 | 18 |
| 872 | 152.99 | wind | 9 | 1440 | < th | dose independent | rect. | 19 | 1 |
| 904 | 153.01 | wind | 9 | 270 | > th | dose independent | rect. | 15 | 23 |
| 915 | 153.04 | wind | 9 | 270 | < th | dose independent | no | NA | NA |
| 920 | 153.05 | humidity | 60 | 14400 | < th | dose independent | sin | 11 | NA |
| 921 | 153.05 | wind | 5 | 90 | > th | dose independent | rect. | 1 | 2 |
| 928 | 153.07 | radiation | 10 | 1440 | < th | dose independent | rect. | 17 | 2 |
| 943 | 153.10 | radiation | 10 | 1440 | < th | dose independent | rect. | 17 | 8 |
| 954 | 153.11 | radiation | 10 | 1440 | < th | dose independent | rect. | 17 | 11 |
| 978 | 153.17 | humidity | 60 | 14400 | > th | dose independent | sin | 11 | NA |
| 990 | 153.18 | radiation | 10 | 1440 | < th | dose independent | rect. | 17 | 4 |
| 991 | 153.18 | wind | 7 | 270 | > th | dose independent | rect. | 24 | 8 |