BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os10g0144800 Os10g0144800|Os10g0144800
(401 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os10g0144800 Cyclin-like F-box domain containing protein 752 0.0
Os10g0145200 Cyclin-like F-box domain containing protein 120 2e-27
Os10g0146000 100 2e-21
Os10g0145000 Cyclin-like F-box domain containing protein 99 7e-21
Os10g0145100 Cyclin-like F-box domain containing protein 96 5e-20
Os07g0123000 Cyclin-like F-box domain containing protein 82 1e-15
Os07g0120400 Cyclin-like F-box domain containing protein 78 1e-14
Os07g0122900 Cyclin-like F-box domain containing protein 76 4e-14
Os07g0120500 Protein of unknown function DUF538 family protein 74 2e-13
Os10g0139300 Cyclin-like F-box domain containing protein 72 7e-13
Os10g0155300 Cyclin-like F-box domain containing protein 69 7e-12
>Os10g0144800 Cyclin-like F-box domain containing protein
Length = 401
Score = 752 bits (1942), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 373/401 (93%), Positives = 373/401 (93%)
Query: 1 MSLSRPLXXXXXXTVPDELHLEIMVXXXXXXXXXXXXXXVCPEWRRVVRDAAFLRRHREL 60
MSLSRPL TVPDELHLEIMV VCPEWRRVVRDAAFLRRHREL
Sbjct: 1 MSLSRPLAAAAAATVPDELHLEIMVRLPALPQALARASAVCPEWRRVVRDAAFLRRHREL 60
Query: 61 HGGVPATAGFFHNTVVFGGAPGGARFVCAGAGPLALSVPPSVSRQGVPCCHTHVNPGDAW 120
HGGVPATAGFFHNTVVFGGAPGGARFVCAGAGPLALSVPPSVSRQGVPCCHTHVNPGDAW
Sbjct: 61 HGGVPATAGFFHNTVVFGGAPGGARFVCAGAGPLALSVPPSVSRQGVPCCHTHVNPGDAW 120
Query: 121 TVLDCRGGRVLLGCCRFSCYFLVYNPITGKRCLVKAASHKRLHLHHSIRCNATLICXXXX 180
TVLDCRGGRVLLGCCRFSCYFLVYNPITGKRCLVKAASHKRLHLHHSIRCNATLIC
Sbjct: 121 TVLDCRGGRVLLGCCRFSCYFLVYNPITGKRCLVKAASHKRLHLHHSIRCNATLICDDDD 180
Query: 181 XXXXGPFRVAAVYTTVTDGGRLFGAAFLSRTGRWTTAPQVFVDLPRGIDLRGEPSAVVGS 240
GPFRVAAVYTTVTDGGRLFGAAFLSRTGRWTTAPQVFVDLPRGIDLRGEPSAVVGS
Sbjct: 181 ADADGPFRVAAVYTTVTDGGRLFGAAFLSRTGRWTTAPQVFVDLPRGIDLRGEPSAVVGS 240
Query: 241 TAYLSAYSYLVLAFDVEHWTMATFQRPPRCGNARLMKTRGDGVLGLVGALELTVRLWARE 300
TAYLSAYSYLVLAFDVEHWTMATFQRPPRCGNARLMKTRGDGVLGLVGALELTVRLWARE
Sbjct: 241 TAYLSAYSYLVLAFDVEHWTMATFQRPPRCGNARLMKTRGDGVLGLVGALELTVRLWARE 300
Query: 301 AGGWVLRSTVELSDMGLLRDLPSAPLPSSDARFPLLPPVKIIGVAEEGDAVFLWTMLGIF 360
AGGWVLRSTVELSDMGLLRDLPSAPLPSSDARFPLLPPVKIIGVAEEGDAVFLWTMLGIF
Sbjct: 301 AGGWVLRSTVELSDMGLLRDLPSAPLPSSDARFPLLPPVKIIGVAEEGDAVFLWTMLGIF 360
Query: 361 MFCPGSMELKKKAVKKQQNRVDMLQQMSLKINDEASMIYVG 401
MFCPGSMELKKKAVKKQQNRVDMLQQMSLKINDEASMIYVG
Sbjct: 361 MFCPGSMELKKKAVKKQQNRVDMLQQMSLKINDEASMIYVG 401
>Os10g0145200 Cyclin-like F-box domain containing protein
Length = 378
Score = 120 bits (301), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 113/374 (30%), Positives = 157/374 (41%), Gaps = 52/374 (13%)
Query: 16 PDELHLEIMVXXXXXXXXXXXXXXVCPEWRRVVRDAAFLRRHRELHGGVPATAGFFHNTV 75
PD++ EI++ VC WRR+ RD FLRR R H P GFFHN+
Sbjct: 18 PDDVIAEILLRLPPHPSFLSRASLVCNRWRRLARDPGFLRRLRAFHR-TPPVLGFFHNS- 75
Query: 76 VFGGAPGGARFVCAGAGPLALSVPPSVSRQGVPCCHTHVNPGD--AWTVLDCRGGRVLLG 133
P RFV A P ++ + R+ GD W +DCR GR LL
Sbjct: 76 -----PDLPRFVPAEGVPGRVAAEAASLRRD----------GDDGMWWCVDCRHGRALLR 120
Query: 134 CCRFSCYFLVYNPITGKRCLVKAASHKRLHLHHSIRCNATLICXXX----XXXXXGPFRV 189
R LV++P+TG+R + +S + ++ NA + C PF V
Sbjct: 121 S-RDWAELLVWDPMTGERRCITVSSQIQ---EGALDLNAAVFCAASGGGDQDCHSSPFHV 176
Query: 190 AAVYTTVTDGGRLFGAAFLSRTGRWTTAPQVFVDLPRGIDLRGEPSAVVGSTAY--LSAY 247
V+TT GR+F + S W V P +L EP +VG Y L
Sbjct: 177 VVVFTTGQCHGRVFACVYSSGIDAWGDPISTPVTSP--CELYEEPPVLVGEALYWLLDGS 234
Query: 248 SYLVLAFDVEHWTMATFQRPPRCG-----NARLMKTRGDGVLGLVGALELTVRLWARE-- 300
L F + +A P N RL++ D VLGL + ++ LWARE
Sbjct: 235 RILEFEFGNQCLCLALIDHPVENHAILKRNIRLVRMEDDDVLGLAFVKDFSLHLWAREVA 294
Query: 301 ---AGGWVLRSTVELSDMGLLRDLPSAPLPSSDARFPLLPPVKIIGVAEEGDAVFLWTML 357
A W+ R +EL DM L PL R P+ I G AE+GD VF+ T+
Sbjct: 295 DDGASQWIPRRAIEL-DMIL-------PLEGYRCR---AMPIWICGFAEDGDVVFIRTVA 343
Query: 358 GIFMFCPGSMELKK 371
G+F+ +++ KK
Sbjct: 344 GVFLVWLDTLKFKK 357
>Os10g0146000
Length = 368
Score = 100 bits (249), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 106/370 (28%), Positives = 148/370 (40%), Gaps = 67/370 (18%)
Query: 17 DELHLEIMVXXXXXXXXXXXXXXVCPEWRRVVRDAAFLRRHRELHGGVPATAGFFHNTVV 76
++L EI++ VC W R++ AFL R R H P GF+HN+
Sbjct: 24 EDLLFEILLRLPPDPDCLHRAALVCRRWGRLIHGPAFLPRLRAFHR-TPPVLGFYHNSRS 82
Query: 77 FGGAPGGARFVCAGAGPLALSVPPSVSRQGVPCCHTHVNPGDAWTVLDCRGGRVLLGCCR 136
G PS P + V W++L CR GRVLL
Sbjct: 83 LG---------------------PSFVALAAPAGPSLVFGDGDWSLLGCRHGRVLLRSGP 121
Query: 137 FSCYFLVYNPITGKRCLVKAASHKRLHLHHSIRCNATLICXXXXXXXXGPFRVAAVYTTV 196
LV++P+TG R V+ RL H CNA ++ G FRVA V+T
Sbjct: 122 GWLQLLVWDPVTGHRSSVRLG---RL-AGHVRACNAAVL-GDQDTRRHGSFRVAFVFTGE 176
Query: 197 TDGGRLFGAAFLSRTGRWTTAPQVFVDLPRGIDLRGEPSAVVGSTAYLSAYSYLVLAFDV 256
GR + S T W + R D+ +PSA+ G Y
Sbjct: 177 ---GRASACLYSSETAAWGRL--ITAGTARCGDVGKKPSALAGDALY------------- 218
Query: 257 EHWTMATFQRPPRCGNARLMKTRGDGVLGLVGALELTVRLWAREAGG---------WVLR 307
W + +R + R +GD G A + LWAREAGG WVL
Sbjct: 219 --WALDDGRRR----HPRARHGQGDPRRGRAAAARRSGSLWAREAGGADGVASTSSWVLL 272
Query: 308 STVELSDMGLLRDLPSAPLPSSDARFPLLPPVKIIGVAEEGDAVFLWTMLGIFMF-CPGS 366
+++L + PLP + R L+PPV+++GV E G + F+WT+ GIFM
Sbjct: 273 KSIDLDVFAPM------PLPCAGGRVILVPPVRLLGVDEGGISAFIWTIEGIFMLHLEDE 326
Query: 367 MELKKKAVKK 376
M +KK A +
Sbjct: 327 MLMKKVAASR 336
>Os10g0145000 Cyclin-like F-box domain containing protein
Length = 400
Score = 98.6 bits (244), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 103/378 (27%), Positives = 154/378 (40%), Gaps = 58/378 (15%)
Query: 14 TVPDELHLEIMVXXXXXXXXXXXXXXVCPEWRRVVRDAAFLRRHRELHGGVPATAGFFHN 73
T+PD++ EI++ V W R R+ +FLRR RE H P GFF N
Sbjct: 18 TLPDDVLAEILLRLPPHPSFLSSASLVSKRWLRHTRNPSFLRRFREFHRTAPVL-GFFLN 76
Query: 74 TVVFGGAPGGARFVCAGAGPLALSVPPSVSRQGVPCCHTHVNPGDA-WTVLDCRGGRVLL 132
+ G L + R N GD W ++ CR GRVLL
Sbjct: 77 S---------------SHGALFFPTDAPLCRIADQVASLRRNTGDGLWWLVGCRHGRVLL 121
Query: 133 GCCRFSCYFLVYNPIT-GKRC------LVKAASHKRLHLHHSIRCNATLICXXXXXXX-- 183
C ++ LV++P+T G C +V+A + + +A + C
Sbjct: 122 RSCDWA-NLLVWDPMTEGFVCFPAPIQMVQADADR----------DAAVFCAASAGDEDR 170
Query: 184 -XGPFRVAAVYTTVTDGGRLFGAAFLSRTGRWTTAPQVFVDLPRGIDLRGEPSAVVGSTA 242
G F VA V+ + G +FG F S G W V LP + + EP+A+ G
Sbjct: 171 RSGAFNVAVVFVS---GDHVFGCMFSSAIGAWGDVISTPVTLPL-LMIYDEPAALAGEAL 226
Query: 243 YLSAYSYLVLAFDVEHWTMATFQRPPRCGNARLMKTR----GDGVLGLVGALELTVRLWA 298
Y +L F+ ++A RP R D +LGL + + LW
Sbjct: 227 YWIVNGSSLLEFNCGSQSLALISRPSDMPATHRWNIRPVSLEDDLLGLAFFNDFCLHLWV 286
Query: 299 RE-----AGGWVLRSTVELSDMGLLRDLPSAPLPSSDARFPLLPPVKIIGVAEEGDAVFL 353
RE A WV R +VE+ L S P+ + D+R ++ P I G + +G+ VF+
Sbjct: 287 REVADDGATNWVPRKSVEMD------KLLSLPVATEDSRRRIV-PAWICGFSGDGNVVFI 339
Query: 354 WTMLGIFMFCPGSMELKK 371
T GIF+ +++ KK
Sbjct: 340 GTPAGIFLVELDTLKFKK 357
>Os10g0145100 Cyclin-like F-box domain containing protein
Length = 379
Score = 95.9 bits (237), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 101/379 (26%), Positives = 158/379 (41%), Gaps = 55/379 (14%)
Query: 14 TVPDELHLEIMVXXXXXXXXXXXXXXVCPEWRRVVRDAAFLRRHRELHGGVPATAGFFHN 73
++PD++ EI++ VC W ++R +FLRR H P GFFHN
Sbjct: 14 SLPDDVVAEILLCLPPHPSFVSGASLVCKRWLHLIRSPSFLRRVCAFH-RTPPVLGFFHN 72
Query: 74 TVVFGGAPGGARFVCAGAGPLALSVPPSVSRQGVPCCHTH---VNPGDAWTVLDCRGGRV 130
+P V +GVP + + GDA +DCR GR
Sbjct: 73 Y---------------------RDLPSFVPAEGVPGRNRMDGVDDGGDARMFIDCRHGRA 111
Query: 131 LLGCCRFSCYFLVYNPITGKRCLVKAASHK-RLHLHHSIRCNATLICXXXXXXXXG---- 185
LL ++ +V++P+TG+R + + K + + R +A L C G
Sbjct: 112 LLRRYDWA-DLVVWDPMTGERRRIAGPNQKMQGGGAGTSRRSAALFCSCDVSGGGGDQDC 170
Query: 186 ---PFRVAAVYTTVTDGGRLFGAAFLSRTGRWTTAPQVFVDLPRGIDLRGEPSAVVGSTA 242
PF V V+T G R F + S T W LP +L P A+VG +
Sbjct: 171 HSSPFHVVVVFTG---GCRAFACVYSSLTDAWGDLISTPAPLP--CELCDTPPALVGEAS 225
Query: 243 YLSAYSYLVLAFDVEHWTMATFQRP-PRCGNARLMKTRGDGVLGLVGALELTVRLWAREA 301
Y +Y L+L F ++ +RP + RL++ DG LGL + T+ LWARE
Sbjct: 226 YWLSYGGLILEFQFGSQSLTLMKRPLEMLADVRLVRLEEDG-LGLAFIKDSTLHLWAREV 284
Query: 302 GG-------WVLRSTVELSDMGLLRDLPSAPLPSSDARFPLLPPVKIIGVAEEGDAVFLW 354
W+ R +EL LP + + + V I G +E+G+ VF+
Sbjct: 285 ADDGAPKWKWIPRRAIELDKF-----LPMPRVLTGKWCGEMF--VSISGFSEDGNVVFIR 337
Query: 355 TMLGIFMFCPGSMELKKKA 373
T+ G+F+ +++ KK +
Sbjct: 338 TLAGVFLVWLEALKFKKMS 356
>Os07g0123000 Cyclin-like F-box domain containing protein
Length = 414
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 97/352 (27%), Positives = 154/352 (43%), Gaps = 45/352 (12%)
Query: 40 VCPEWRRVVRDAAFLRRHRELHGGVPATAGFFHNTVVFGGAPGGARFVCAGAGPLALSVP 99
VC WRR++ D AFLRR+R+ HG P GF HN V GG G R+V A P++ P
Sbjct: 42 VCKPWRRLLTDQAFLRRYRDFHGA-PPLLGFLHN--VAGG--GEDRYVPFTASPVS---P 93
Query: 100 PSVSRQGVPCCHTHVNPGDAWTVLDCRGGRVLLGCCRFSCYFLVYNPITGKRCLVKAASH 159
P ++ PC W LDCR GR LL FS F V++P+ G+R +
Sbjct: 94 PDIA---CPC----------WVALDCRHGRALLDEFPFSADFTVWHPMAGRRRRLPRPDL 140
Query: 160 KRLHLHHSIRCNATLICXXXXXXXXGPFRVAAVYTTVTD--GGRLFGAAFLSRTGRW--T 215
+ + + + C GPF V V + R + + S + W T
Sbjct: 141 PYFMSYAAAVLCSAVGCNHLDCRGGGPFLVVVVGIDEPEQQNSRPWATVYSSDSDSWSPT 200
Query: 216 TAPQVFVDLPRGIDLRGEPSAVVGSTAYLS-AYSYLVLAFDVEHWTMATFQRPPRCGNAR 274
T+ + + L D+ +P+A+VG + + A ++ +++ +++ PP
Sbjct: 201 TSDYLNLTLTPNCDVDRKPAALVGDALHFALAEGSGIIKYNMGECSLSRIH-PPVVYKGG 259
Query: 275 LMKTRGDGVLGLVGALELTV-RLWAREA---GG--WVLRSTVELSDMGLLRDLPSAPLPS 328
++ G L +G +E ++ +W+ + GG W ++L + LPS +
Sbjct: 260 IVVMAMGGNLLGLGGIEGSILSMWSSDVSLDGGVRWEKNRVIKLESL-----LPS--IDC 312
Query: 329 SDARFPLLPPVKIIGVAEEGDAVFLWTMLGIFMFCPGSMELKKKAVKKQQNR 380
+A L IG + D VF+ T GIFM +ELK V+K R
Sbjct: 313 VEAVACELAQPAPIGFVDGADIVFVRTDAGIFM-----IELKSMCVRKVCER 359
>Os07g0120400 Cyclin-like F-box domain containing protein
Length = 368
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 88/363 (24%), Positives = 141/363 (38%), Gaps = 45/363 (12%)
Query: 40 VCPEWRRVVRDAAFLRRHRELHGGVPATAGFFHNTVVFGGAPGGARFVCAGA-GPLALSV 98
VC WR+++ D AFLRR+R H P GF HN + RFV + P
Sbjct: 34 VCKRWRQLLTDPAFLRRYRAFH-RTPPMLGFIHNVDHSSNSSYIPRFVATTSPSPFYPDF 92
Query: 99 PPSVSRQGVPCCHTHVNPGDAWTVLDCRGGRVLLGCCRFSCYFLVYNPITGKRCLVKAAS 158
PP + W LDCR GR+LL +V++P TG +
Sbjct: 93 PPP-----------SIEFPTYWWALDCRHGRLLLQLFN-PIDLMVWDPTTGDHRIFPQPP 140
Query: 159 HKRLHLHHSIRCNATLICXXXXXXXXGPFRVAAVYTTVTDGGRLFGAAFLSRTGRWTTAP 218
+ + ++ C AT C GP+ V V T D + + S TG W++
Sbjct: 141 YLDFYCTGAVLC-ATRGC-RHVDCHGGPYLVVFVGTGEDDHS--WACVYSSETGEWSSQA 196
Query: 219 QVFVDLPRGIDLRGEPSAVVGSTAYLSAY-SYLVLAFDVEHWTMATFQRPPRCGNARLMK 277
+ D + P +V T Y +L +D+ ++ PP ++
Sbjct: 197 SIAFD----SYVEMLPGLLVQDTLYFRCERGKRILGYDIGRHELSEIDPPPLGHEVGILM 252
Query: 278 TRGDGVLGLVGALELTVRLWAREAGGWVLRSTVELSDMGLLRDLPSAPLPSSDARFPLLP 337
G G LG + ++ LW+R G + + +GL D P+
Sbjct: 253 ESGYGGLGFATVEDCSILLWSRYVGDDGIEEWKKSWVIGL------------DFLNPVGN 300
Query: 338 PV---KIIGVAEEGDAVFLWTMLGIFMFCPGSMELKKKAVKK--QQNRVDMLQQMSLKIN 392
P ++ G AE +F+ + +G+F ++ELK VKK ++ ++ MS +
Sbjct: 301 PSLSWELAGFAEGVHTIFISSEIGVF-----TIELKSGQVKKLCEEGYYTVVPYMSFYTS 355
Query: 393 DEA 395
D A
Sbjct: 356 DIA 358
>Os07g0122900 Cyclin-like F-box domain containing protein
Length = 386
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 94/356 (26%), Positives = 139/356 (39%), Gaps = 71/356 (19%)
Query: 40 VCPEWRRVVRDAAFL-RRHRELHGGVPATAGFFHNTVVFGG--APGGARFVCAGAGPLAL 96
VC WRR++ D FL R P GF H+ P A+FV
Sbjct: 32 VCKPWRRLLSDPVFLRRHRAFHRRRAPPLLGFIHHVSDEPARRVPSFAQFV--------- 82
Query: 97 SVPPSVSRQGVPCCHTHVNPGDAWTVLDCRGGRVLLGCCRFSCYFLVYNPITGKRCLVKA 156
P+ + + H + P LDCR GR L +++P+TG
Sbjct: 83 ---PTTAFRPAELEHKNCWP------LDCRHGRALFQSSNVE--LTIWDPMTGDV----- 126
Query: 157 ASHKRLHLHHSIRC---NATLICX----XXXXXXXGPFRVAAVYTTVTDGGRLFGAA--F 207
+R + C A ++C GPF + V D G +A +
Sbjct: 127 ---RRQREPYGTLCTFATAAVLCAVPGCDHHDCHGGPFVLVFVGNDEDDDGEEIASASSY 183
Query: 208 LSRTGRWTTAPQVFVDLPRGIDLRGEPSAVVGSTA-YLSAYSYLVLAFDVEHWTMATFQR 266
S TG WT A V D ++L +PS + G +L+ + +L +D+ ++
Sbjct: 184 SSETGTWTAASTVHHD--DSLELESKPSVLAGDAVHFLTYFGKAILRYDLTKLELSVILP 241
Query: 267 PPRCGNAR-LMKTRGDGVLGL-VGALELTVRLWAREAG-GWVLRSTVELSDMGLLRDLPS 323
P G+ L+ T DG LGL + E ++ LWAR AG GWV R+ ++L
Sbjct: 242 PVAYGDGDALLMTAEDGELGLALFDGEASIHLWARVAGAGWVRRNVIDLY---------- 291
Query: 324 APLPSSDARFPLLPPV---KIIGVAEEGDAVFLWTMLGIFMFCPGSMELKKKAVKK 376
A P PV ++G AE D +FL T+ G + MELK + K
Sbjct: 292 -------AVLPFFDPVHSLSLVGFAEGTDIIFLHTIHGDY-----RMELKSLQISK 335
>Os07g0120500 Protein of unknown function DUF538 family protein
Length = 516
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/250 (26%), Positives = 104/250 (41%), Gaps = 35/250 (14%)
Query: 40 VCPEWRRVVRDAAFLRRHRELHGGVPATAGFFHNTVVFGGAPGGARFV-CAGAGPLALSV 98
VC WRR++ D AFLRR+R H P GF HN RFV A P +
Sbjct: 33 VCKPWRRILTDPAFLRRYRAFH-RTPPVLGFLHNVDGNKAISSVPRFVPTTAASPFS--- 88
Query: 99 PPSVSRQGVPCCHTHVNPGDAWTVLDCRGGRVLLGCCRFSCYFLVYNPITGKRCLVKAAS 158
PP+ ++P + W LDCR GRVL +V++PITG +
Sbjct: 89 PPA------------IDPPNWWWALDCRHGRVLSHLFN-PMELMVWDPITGDQHRFPLPP 135
Query: 159 HKRLHLHHSIRCNAT----LICXXXXXXXXGPFRVAAVYTTVTDGGRLFGAAFLSRTGRW 214
H + ++ C A+ L C GPF V V T D + + S+TG W
Sbjct: 136 HPHAYCTGAVLCAASDCHHLDC------HQGPFLVVFVGTGRHDHS--WACVYSSKTGEW 187
Query: 215 TTAPQVFVDLPRGIDLRGEPSAVVGSTAYLS-AYSYLVLAFDVEHWTMATFQRPPRCGNA 273
++ + +D +++ PS + +T Y Y +L +D+ ++ P
Sbjct: 188 SSQASIVLD--SYVEML--PSVLAENTLYFYCEYGTKILGYDIGKHELSEIDPPLGHDGG 243
Query: 274 RLMKTRGDGV 283
L+++ +G
Sbjct: 244 ILIESEYEGT 253
>Os10g0139300 Cyclin-like F-box domain containing protein
Length = 425
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 100/379 (26%), Positives = 143/379 (37%), Gaps = 35/379 (9%)
Query: 17 DELHLEIMVXXXXXXXXXXXXXXVCPEWRRVVRDAAFLRRHRELHGGVPAT--AGFFHNT 74
D++ EI + V +RRVV FLRR +LHGG P GFF N
Sbjct: 28 DDILAEIFLRLPPHPACLRRVSLVSRRFRRVVTSRRFLRRFSDLHGGAPGAPLVGFFSNH 87
Query: 75 VVFGGAPGGARFVCAGAGPLALSVPPSVSRQGVPCCHTHVNPG-------DA-WTVLDCR 126
G RF+ G S + NPG DA W V+ CR
Sbjct: 88 N--HGPWADTRFIPVGVDGTGDSRRSRCRSRRATAAR---NPGGVLALGDDAEWHVIGCR 142
Query: 127 GGRVLLGCCRFSCYFLVYNPITGKRCLVKAASHKRLHLHHSIRCNATLICXXXXXXXXGP 186
GGRVLL LV P+ G+R + A + P
Sbjct: 143 GGRVLL-LSPTRLRLLVLEPMLGRRQYIPAPPAPEYRPAYFSNAAVVSAAGGHDELRLRP 201
Query: 187 --FRVAAVYTTVTDGGRLFGAAFLSRTGRWTTAPQVFVDLPRGIDLRGEPSAVVGSTAYL 244
FRV V + R + S T RWT A ++ ID G PS ++G T Y
Sbjct: 202 HLFRVVFVSSNAATK-RSTAFVYNSATFRWTKAAAT--EMSSVID--GRPSVLIGQTLYW 256
Query: 245 SAYSYLVLAFDVEHWTMATFQRPPRC------GNARLMKTRGDGVLGLVGA-----LEL- 292
S+ ++AF++E + P N ++ R G + A L+L
Sbjct: 257 HLISHGLVAFNLETHELHEILVPADAFDDVHDANLSIVVPRSGGGGVGLAAVSGYILQLW 316
Query: 293 TVRLWAREAGGWVLRSTVELSDMGLLRDLPSAPLPSSDARFPLLPPVKIIGVAEEGDAVF 352
T+R + A W LR+ V L + LR+ P P A +P V ++ + E+ + +
Sbjct: 317 TLRDYTHGASTWDLRNIVVLDALLPLRNARLPPPPQLPASAKPMPLVWLMALDEDENVGY 376
Query: 353 LWTMLGIFMFCPGSMELKK 371
+WT G+F +M K
Sbjct: 377 VWTAAGVFAVQLDTMNYHK 395
>Os10g0155300 Cyclin-like F-box domain containing protein
Length = 379
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 89/353 (25%), Positives = 136/353 (38%), Gaps = 64/353 (18%)
Query: 40 VCPEWRRVVRDAAFLRRHRELHGGVPATAGFF---HNTVVFGGAPGGARFVCAGAGPLAL 96
VC WRR+ + F RR H P GFF VF G P
Sbjct: 54 VCKRWRRLAFEPGFRRRFVARHE--PPFLGFFFPYDFDPVFSFNAGFRSTTAQHHLPAHR 111
Query: 97 SVPPSVSRQGVPCCHTHVNPGDAWTVLDCRGGRVLL-----GCCRFSCYFLVYNPITGKR 151
+P G W +++C G L G C+ F+V +PI+G R
Sbjct: 112 FLPER-------------EIGLRWEIVNCCKGLALFRITFRGGCKCK-EFMVVDPISGDR 157
Query: 152 CLVKAASHKRLHLHHSIRCNATLICXXXXXXXXGPFRVAAVYTTVTDGGRLFGAAFLSRT 211
L+ L +AT++ FRV AV+ +F + + S
Sbjct: 158 RLLP------FPLVDGKFLSATVVPAAADRRS---FRVVAVFAERNTFTSVFASVYSSDA 208
Query: 212 GRWTTAPQVFVDLPRGIDLRGEPSAVVGSTAYLSAYSYLVLAFDVEHWTMATFQRPPRCG 271
G W+ LP + + PS + G+ + Y VL FD+E + + P
Sbjct: 209 GVWSDYVSRLC-LPWEVWVL-RPSVLAGNAVHWFLDGYNVLMFDLESQKLGFSELPLDAK 266
Query: 272 NARLMKTR--------GDGVLGLVGALELTVRLWAREAGG-----WVLRSTVELSDMGLL 318
+ R GDG LGL + T++LW RE G W+LR T++L+ +
Sbjct: 267 DDEDFPHRCRCQIIPAGDGRLGLAVIVGSTMQLWEREIGDGSDATWLLRRTLQLNFL--- 323
Query: 319 RDLPSAPLPSSDARFPLLPPVKIIGVAEEGDAVFLWTMLGIFMFCPGSMELKK 371
PL + + I+GVAEE ++ LWT +G+FM ++++K
Sbjct: 324 ------PLEAEGRKL-------IVGVAEENSSILLWTRVGLFMVHLKFLQVRK 363
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.326 0.140 0.453
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 14,634,330
Number of extensions: 698504
Number of successful extensions: 2211
Number of sequences better than 1.0e-10: 12
Number of HSP's gapped: 2201
Number of HSP's successfully gapped: 12
Length of query: 401
Length of database: 17,035,801
Length adjustment: 103
Effective length of query: 298
Effective length of database: 11,657,759
Effective search space: 3474012182
Effective search space used: 3474012182
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 157 (65.1 bits)