Os05g0320100
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Cyclin-like F-box domain containing protein.
FiT-DB / Search/ Help/ Sample detail
|
Os05g0320100 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Cyclin-like F-box domain containing protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 34.94 | 0.278 | 9.25 | 1.01 | 0.696 | -0.571 | 0.0971 | 1.93 | 0.211 | 6.93 | 21.49 | 1625 | -- | -- |
| 35.42 | 0.277 | 9.28 | 0.78 | 0.777 | -0.639 | 0.187 | -- | 0.193 | 6.77 | 19.13 | 11466 | -- | -- |
| 34.95 | 0.275 | 9.25 | 0.996 | 0.689 | -0.572 | -- | 1.9 | 0.204 | 6.96 | 21.79 | 1649 | -- | -- |
| 34.76 | 0.275 | 9.28 | 0.727 | 0.725 | -0.722 | -- | -- | 0.186 | 6.8 | 15.09 | 11169 | -- | -- |
| 47.01 | 0.319 | 9.27 | 0.934 | -- | -1.1 | -- | 2.98 | 0.197 | -- | 23.74 | 437 | -- | -- |
| 44.05 | 0.311 | 9.34 | 0.27 | 0.72 | -- | 0.0539 | -- | -0.0546 | 6.96 | -- | -- | -- | -- |
| 44.06 | 0.311 | 9.34 | 0.271 | 0.72 | -- | -- | -- | -0.0547 | 6.96 | -- | -- | -- | -- |
| 50.25 | 0.33 | 9.33 | 0.426 | -- | -0.846 | -- | -- | 0.0382 | -- | 24.39 | 419 | -- | -- |
| 41.76 | 0.303 | 9.34 | -- | 0.656 | -0.521 | -- | -- | -0.0685 | 7.9 | 25.79 | 1614 | -- | -- |
| 71.29 | 0.395 | 9.35 | 0.286 | -- | -- | -- | -- | -0.0413 | -- | -- | -- | -- | -- |
| 45.99 | 0.317 | 9.34 | -- | 0.723 | -- | -- | -- | -0.0849 | 6.94 | -- | -- | -- | -- |
| 54.98 | 0.345 | 9.35 | -- | -- | -0.788 | -- | -- | -0.0206 | -- | 24.7 | 413 | -- | -- |
| 73.44 | 0.4 | 9.36 | -- | -- | -- | -- | -- | -0.073 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 30.51 | temperature | 20 | 720 | > th | dose dependent | rect. | 2 | 8 |
| 11 | 30.92 | humidity | 90 | 14400 | > th | dose dependent | rect. | 20 | 5 |
| 19 | 31.12 | humidity | 90 | 14400 | > th | dose independent | rect. | 18 | 7 |
| 27 | 31.16 | humidity | 90 | 14400 | < th | dose independent | rect. | 18 | 7 |
| 44 | 31.30 | humidity | 90 | 14400 | > th | dose dependent | rect. | 22 | 1 |
| 57 | 31.35 | humidity | 90 | 14400 | > th | dose independent | sin | 15 | NA |
| 86 | 31.46 | humidity | 90 | 14400 | > th | dose dependent | sin | 15 | NA |
| 111 | 31.56 | humidity | 90 | 14400 | < th | dose independent | sin | 16 | NA |
| 140 | 31.63 | humidity | 90 | 14400 | > th | dose independent | rect. | 22 | 1 |
| 145 | 31.64 | temperature | 30 | 720 | < th | dose dependent | rect. | 3 | 7 |
| 156 | 31.67 | humidity | 90 | 14400 | < th | dose independent | rect. | 21 | 2 |
| 195 | 31.79 | humidity | 90 | 14400 | > th | dose independent | rect. | 9 | 18 |
| 289 | 31.97 | humidity | 90 | 14400 | > th | dose dependent | rect. | 15 | 17 |
| 308 | 32.00 | humidity | 90 | 14400 | > th | dose dependent | rect. | 4 | 22 |
| 332 | 32.04 | humidity | 80 | 14400 | > th | dose dependent | rect. | 18 | 1 |
| 391 | 32.10 | humidity | 90 | 14400 | < th | dose independent | rect. | 17 | 17 |
| 443 | 32.15 | wind | 1 | 43200 | > th | dose dependent | rect. | 6 | 1 |
| 493 | 32.20 | temperature | 20 | 720 | > th | dose dependent | sin | 7 | NA |
| 497 | 32.20 | humidity | 90 | 14400 | > th | dose dependent | rect. | 9 | 23 |
| 515 | 32.22 | humidity | 90 | 14400 | > th | dose independent | rect. | 4 | 23 |
| 540 | 32.24 | radiation | 1 | 14400 | > th | dose independent | rect. | 18 | 11 |
| 546 | 32.24 | humidity | 90 | 14400 | > th | dose dependent | no | NA | NA |
| 551 | 32.24 | humidity | 90 | 14400 | > th | dose dependent | rect. | 18 | 23 |
| 577 | 32.26 | humidity | 90 | 14400 | > th | dose independent | rect. | 1 | 23 |
| 596 | 32.28 | humidity | 90 | 14400 | > th | dose independent | no | NA | NA |
| 624 | 32.31 | humidity | 90 | 14400 | < th | dose independent | rect. | 18 | 1 |
| 630 | 32.31 | humidity | 80 | 14400 | > th | dose dependent | rect. | 17 | 3 |
| 655 | 32.35 | humidity | 90 | 14400 | < th | dose independent | rect. | 24 | 23 |
| 714 | 32.43 | radiation | 1 | 14400 | > th | dose independent | rect. | 18 | 1 |
| 732 | 32.44 | humidity | 80 | 43200 | < th | dose dependent | rect. | 22 | 1 |
| 743 | 32.46 | humidity | 90 | 14400 | < th | dose independent | rect. | 2 | 23 |
| 745 | 32.46 | wind | 9 | 43200 | < th | dose dependent | rect. | 6 | 1 |
| 753 | 32.47 | humidity | 90 | 14400 | < th | dose independent | no | NA | NA |
| 790 | 32.52 | humidity | 80 | 43200 | > th | dose independent | rect. | 24 | 1 |
| 803 | 32.53 | humidity | 80 | 14400 | > th | dose independent | rect. | 12 | 8 |
| 808 | 32.53 | wind | 1 | 43200 | < th | dose dependent | rect. | 1 | 1 |
| 813 | 32.54 | wind | 3 | 43200 | < th | dose independent | rect. | 6 | 4 |
| 830 | 32.56 | humidity | 80 | 14400 | > th | dose independent | rect. | 16 | 2 |
| 850 | 32.58 | wind | 3 | 43200 | > th | dose independent | rect. | 6 | 4 |
| 852 | 32.58 | humidity | 80 | 43200 | > th | dose independent | rect. | 23 | 6 |
| 856 | 32.59 | humidity | 80 | 14400 | < th | dose independent | rect. | 14 | 4 |
| 862 | 32.60 | wind | 1 | 43200 | < th | dose independent | rect. | 1 | 1 |
| 864 | 32.60 | humidity | 80 | 43200 | > th | dose independent | rect. | 23 | 8 |
| 886 | 32.62 | wind | 3 | 43200 | < th | dose dependent | rect. | 8 | 1 |
| 892 | 32.63 | wind | 3 | 43200 | > th | dose independent | rect. | 3 | 11 |
| 893 | 32.63 | radiation | 1 | 14400 | < th | dose independent | rect. | 18 | 11 |
| 918 | 32.66 | humidity | 90 | 14400 | < th | dose independent | rect. | 20 | 23 |
| 920 | 32.67 | humidity | 80 | 43200 | > th | dose independent | rect. | 3 | 2 |
| 924 | 32.67 | wind | 3 | 43200 | < th | dose independent | rect. | 3 | 11 |
| 925 | 32.67 | radiation | 1 | 720 | < th | dose dependent | rect. | 5 | 2 |
| 926 | 32.68 | humidity | 80 | 14400 | < th | dose independent | rect. | 16 | 1 |
| 931 | 32.68 | humidity | 80 | 43200 | < th | dose independent | rect. | 23 | 8 |
| 974 | 32.72 | wind | 3 | 43200 | < th | dose independent | rect. | 2 | 8 |
| 992 | 32.74 | wind | 3 | 43200 | > th | dose independent | rect. | 6 | 1 |