BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os09g0457900 Os09g0457900|AK067195
(274 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os09g0457900 Similar to AP2 domain containing protein RAP2.... 421 e-118
Os02g0764700 Similar to Ethylene-responsive transcription f... 111 6e-25
Os08g0474000 Similar to AP2 domain containing protein RAP2.... 110 1e-24
Os12g0168100 Similar to AP2 domain containing protein RAP2.... 73 3e-13
Os01g0868000 Pathogenesis-related transcriptional factor an... 72 4e-13
Os04g0398000 Pathogenesis-related transcriptional factor an... 72 6e-13
Os05g0437133 Pathogenesis-related transcriptional factor an... 71 1e-12
Os11g0168500 Similar to AP2 domain containing protein RAP2.... 70 2e-12
Os04g0429050 70 2e-12
Os02g0546800 Pathogenesis-related transcriptional factor an... 69 3e-12
AK100167 69 4e-12
Os06g0194000 Similar to Ethylene-responsive transcription f... 69 4e-12
Os02g0782700 Similar to Transcription factor EREBP1 69 5e-12
Os02g0546600 Similar to AP2 domain containing protein RAP2.... 68 8e-12
Os07g0617000 Similar to Ethylene response factor 2 65 4e-11
Os03g0183000 Similar to AP2 domain containing protein RAP2.... 65 5e-11
Os08g0537900 Similar to Ethylene-responsive transcription f... 65 5e-11
Os05g0361700 Similar to EREBP-2 protein (Fragment) 65 5e-11
Os09g0434500 Similar to Ethylene response factor 2 65 6e-11
>Os09g0457900 Similar to AP2 domain containing protein RAP2.6 (Fragment)
Length = 274
Score = 421 bits (1083), Expect = e-118, Method: Compositional matrix adjust.
Identities = 212/274 (77%), Positives = 212/274 (77%)
Query: 1 MTKKVIPAMAAARQDSCKTKLDERGGSHQAPSSARWISSEQEHSIIVAALRYVVSGCTTP 60
MTKKVIPAMAAARQDSCKTKLDERGGSHQAPSSARWISSEQEHSIIVAALRYVVSGCTTP
Sbjct: 1 MTKKVIPAMAAARQDSCKTKLDERGGSHQAPSSARWISSEQEHSIIVAALRYVVSGCTTP 60
Query: 61 PPEIVTVACGEACALCGIDGCLGCDFFXXXXXXXXXXVMATDYXXXXXXXXXXXXXXXXX 120
PPEIVTVACGEACALCGIDGCLGCDFF VMATDY
Sbjct: 61 PPEIVTVACGEACALCGIDGCLGCDFFGAEAAGNEEAVMATDYAAAAAAAAVAGGSGGKR 120
Query: 121 XXXXXXXXXXXXXXHRPWGKWAAEIRDPRRAVRKWLGTFDTXXXXXXXXXXXXLEFRGAR 180
HRPWGKWAAEIRDPRRAVRKWLGTFDT LEFRGAR
Sbjct: 121 VRRRRKKNVYRGVRHRPWGKWAAEIRDPRRAVRKWLGTFDTAEEAARAYDRAALEFRGAR 180
Query: 181 AKLNFPCSEPLPMPSQRNGNGGDXXXXXXXXXEQMTPTLSPCSADAEETTTPVDWQMGAD 240
AKLNFPCSEPLPMPSQRNGNGGD EQMTPTLSPCSADAEETTTPVDWQMGAD
Sbjct: 181 AKLNFPCSEPLPMPSQRNGNGGDAVTAATTTAEQMTPTLSPCSADAEETTTPVDWQMGAD 240
Query: 241 EAGSNQLWDGLQDLMKLDEADTWFPPFSGAASSF 274
EAGSNQLWDGLQDLMKLDEADTWFPPFSGAASSF
Sbjct: 241 EAGSNQLWDGLQDLMKLDEADTWFPPFSGAASSF 274
>Os02g0764700 Similar to Ethylene-responsive transcription factor 4
(Ethylene-responsive element binding factor 4) (Related
to APETALA-2 protein 5) (EREBP-4) (AtERF4)
Length = 242
Score = 111 bits (277), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 84/265 (31%), Positives = 106/265 (40%), Gaps = 44/265 (16%)
Query: 20 KLDERGGSHQAPSSARWISSEQEHSIIVAALRYVVSGCTT-----PPPEIVTVACGEA-C 73
+++ GG P+S E+E S+ + AL VVSG TT P P + TV G A C
Sbjct: 4 RVERGGGGFHLPNS------EREDSLFIRALISVVSGDTTVPTLLPEPTMATVVAGAATC 57
Query: 74 ALCGIDGCLGCDFFXXXXXXXXXXVMA--------TDYXXXXXXXXXXXXXXXXXXXXXX 125
A CG+DGC+G D + T
Sbjct: 58 ARCGVDGCIGVDCEVVVLAAAAGSSCSDEEDEGECTTGAVASGGVTGGVGKRRPRRRSGG 117
Query: 126 XXXXXXXXXHRPWGKWAAEIRDPRRAVRKWLGTFDTXXXXXXXXXXXXLEFRGARAKLNF 185
RPWGKWAAEIRDPRRAV KWLGTFDT LEFRG RAKLNF
Sbjct: 118 EGSRYRGVRRRPWGKWAAEIRDPRRAVCKWLGTFDTAEDAARAYDVAALEFRGQRAKLNF 177
Query: 186 PCS----EPLPMPSQRNGNGGDXXXXXXXXXEQMTPTLSPCSADAEETTTPVDWQMGADE 241
P S +P P+ C ++A + A
Sbjct: 178 PASTAAQQPRPLLHHN--------------------LRENCGSNASSPVHAPEHARTAAA 217
Query: 242 AGSNQLWDGLQDLMKLDEADTWFPP 266
A ++WDGL+++M LD+ W P
Sbjct: 218 AKDQEIWDGLREIMMLDDGSFWSMP 242
>Os08g0474000 Similar to AP2 domain containing protein RAP2.6 (Fragment)
Length = 219
Score = 110 bits (275), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 68/139 (48%), Positives = 78/139 (56%), Gaps = 17/139 (12%)
Query: 136 RPWGKWAAEIRDPRRAVRKWLGTFDTXXXXXXXXXXXXLEFRGARAKLNFPCSEPLPMPS 195
RPWGKWAAEIRDPRRAVRKWLGTFDT +EFRG RAKLNFP E L
Sbjct: 82 RPWGKWAAEIRDPRRAVRKWLGTFDTAEEAARAYDRAAVEFRGPRAKLNFPFPEQLSAHD 141
Query: 196 QRNGNGGDXXXXXXXXXEQMTPTLSPCSADAEETTTPVDW--------QMGADEAGSNQL 247
NG+ + ++P SP SADA+E W G E G +QL
Sbjct: 142 DSNGDAS-----AAAKSDTLSP--SPRSADADEQVEHTRWPQGGGGGGGGGGGETG-DQL 193
Query: 248 WDGLQDLMKLDEAD-TWFP 265
W+GLQDLM+LDE +WFP
Sbjct: 194 WEGLQDLMQLDEGGLSWFP 212
>Os12g0168100 Similar to AP2 domain containing protein RAP2.6 (Fragment)
Length = 341
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 33/52 (63%), Positives = 35/52 (67%)
Query: 135 HRPWGKWAAEIRDPRRAVRKWLGTFDTXXXXXXXXXXXXLEFRGARAKLNFP 186
RPWGKWAAEIRDP +A R WLGTFDT L FRG+RAKLNFP
Sbjct: 161 QRPWGKWAAEIRDPHKAARVWLGTFDTAEDAARAYDGAALRFRGSRAKLNFP 212
>Os01g0868000 Pathogenesis-related transcriptional factor and ERF domain
containing protein
Length = 351
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 31/50 (62%), Positives = 34/50 (68%)
Query: 137 PWGKWAAEIRDPRRAVRKWLGTFDTXXXXXXXXXXXXLEFRGARAKLNFP 186
PWGKWAAEIRDP +A R WLGTF+T L FRG+RAKLNFP
Sbjct: 137 PWGKWAAEIRDPHKAARVWLGTFETAEAAARAYDEAALRFRGSRAKLNFP 186
>Os04g0398000 Pathogenesis-related transcriptional factor and ERF domain
containing protein
Length = 268
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 31/52 (59%), Positives = 35/52 (67%)
Query: 135 HRPWGKWAAEIRDPRRAVRKWLGTFDTXXXXXXXXXXXXLEFRGARAKLNFP 186
RPWGKWAAEIRDP++A R WLGTFDT L F+G +AKLNFP
Sbjct: 72 QRPWGKWAAEIRDPKKAARVWLGTFDTAEDAAIAYDEAALRFKGTKAKLNFP 123
>Os05g0437133 Pathogenesis-related transcriptional factor and ERF domain
containing protein
Length = 228
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 31/50 (62%), Positives = 34/50 (68%)
Query: 137 PWGKWAAEIRDPRRAVRKWLGTFDTXXXXXXXXXXXXLEFRGARAKLNFP 186
PWGKWAAEIRDP +A R WLGTF+T L FRG+RAKLNFP
Sbjct: 35 PWGKWAAEIRDPHKAARVWLGTFETAEAAARAYDEAALRFRGSRAKLNFP 84
>Os11g0168500 Similar to AP2 domain containing protein RAP2.6 (Fragment)
Length = 318
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 33/52 (63%), Positives = 34/52 (65%)
Query: 135 HRPWGKWAAEIRDPRRAVRKWLGTFDTXXXXXXXXXXXXLEFRGARAKLNFP 186
RPWGKWAAEIRDP +A R WLGTFDT L FRG RAKLNFP
Sbjct: 136 QRPWGKWAAEIRDPVKAARVWLGTFDTAEAAARAYDDAALRFRGCRAKLNFP 187
>Os04g0429050
Length = 260
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 32/52 (61%), Positives = 33/52 (63%)
Query: 135 HRPWGKWAAEIRDPRRAVRKWLGTFDTXXXXXXXXXXXXLEFRGARAKLNFP 186
RPWGKWAAEIRDP RA R WLGTF T L FRG RA+LNFP
Sbjct: 84 RRPWGKWAAEIRDPHRAARVWLGTFATAEDAARAYDAAALRFRGGRARLNFP 135
>Os02g0546800 Pathogenesis-related transcriptional factor and ERF domain
containing protein
Length = 216
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 32/50 (64%), Positives = 33/50 (66%)
Query: 137 PWGKWAAEIRDPRRAVRKWLGTFDTXXXXXXXXXXXXLEFRGARAKLNFP 186
PWGKWAAEIRDPR+A R WLGTF T L FRG RAKLNFP
Sbjct: 100 PWGKWAAEIRDPRKAARVWLGTFRTTEDAARAYDAAVLRFRGRRAKLNFP 149
>AK100167
Length = 571
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 32/63 (50%), Positives = 39/63 (61%), Gaps = 2/63 (3%)
Query: 135 HRPWGKWAAEIRDPRRAVRKWLGTFDTXXXXXXXXXXXXLEFRGARAKLNFPCSEPLPMP 194
RPWGKWAAEIRDPR+ VR WLGTF++ RG +AK+NFP + P+
Sbjct: 120 QRPWGKWAAEIRDPRKGVRVWLGTFNSPEEAARAYDAEARRIRGKKAKVNFP--DGAPVA 177
Query: 195 SQR 197
SQR
Sbjct: 178 SQR 180
>Os06g0194000 Similar to Ethylene-responsive transcription factor 3
(Ethylene-responsive element binding factor 3 homolog)
(EREBP-5) (NtERF5)
Length = 362
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 40/64 (62%), Gaps = 2/64 (3%)
Query: 135 HRPWGKWAAEIRDPRRAVRKWLGTFDTXXXXXXXXXXXXLEFRGARAKLNFPCSEPLPMP 194
RPWGKWAAEIRDPR+ VR WLGTF++ RG +AK+NFP + P+
Sbjct: 120 QRPWGKWAAEIRDPRKGVRVWLGTFNSPEEAARAYDAEARRIRGKKAKVNFP--DGAPVA 177
Query: 195 SQRN 198
SQR+
Sbjct: 178 SQRS 181
>Os02g0782700 Similar to Transcription factor EREBP1
Length = 365
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 36/87 (41%), Positives = 45/87 (51%), Gaps = 4/87 (4%)
Query: 135 HRPWGKWAAEIRDPRRAVRKWLGTFDTXXXXXXXXXXXXLEFRGARAKLNFPCSEPLPMP 194
RPWGKWAAEIRDPR+ VR WLGTF++ RG +AK+NFP + P
Sbjct: 125 QRPWGKWAAEIRDPRKGVRVWLGTFNSAEEAARAYDAEARRIRGKKAKVNFPEA---PTT 181
Query: 195 SQRNGNGGDXXXXXXXXXEQMTPTLSP 221
+Q+ G EQ PT+ P
Sbjct: 182 AQKRRAGSTTAKAPKSSVEQ-KPTVKP 207
>Os02g0546600 Similar to AP2 domain containing protein RAP2.2 (Fragment)
Length = 247
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 32/50 (64%), Positives = 33/50 (66%)
Query: 137 PWGKWAAEIRDPRRAVRKWLGTFDTXXXXXXXXXXXXLEFRGARAKLNFP 186
PWGKWAAEIRDPR+A R WLGTF T L FRG RAKLNFP
Sbjct: 133 PWGKWAAEIRDPRKAARVWLGTFRTAEDAARAYDAAALRFRGRRAKLNFP 182
>Os07g0617000 Similar to Ethylene response factor 2
Length = 342
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 29/52 (55%), Positives = 32/52 (61%)
Query: 135 HRPWGKWAAEIRDPRRAVRKWLGTFDTXXXXXXXXXXXXLEFRGARAKLNFP 186
RPWGKWAAEIRDPR+ VR WLGTF T RG +AK+NFP
Sbjct: 117 QRPWGKWAAEIRDPRKGVRVWLGTFGTAEEAAMAYDVEARRIRGKKAKVNFP 168
>Os03g0183000 Similar to AP2 domain containing protein RAP2.6 (Fragment)
Length = 334
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 31/66 (46%), Positives = 37/66 (56%), Gaps = 2/66 (3%)
Query: 135 HRPWGKWAAEIRDPRRAVRKWLGTFDTXXXXXXXXXXXXLEFRGARAKLNFPCSEPLPMP 194
RPWGKWAAEIRDP + R WLGTF+T RG++AK+NFP + P
Sbjct: 116 QRPWGKWAAEIRDPHKGTRVWLGTFNTPEEAARAYDVEARRLRGSKAKVNFPATPAAARP 175
Query: 195 SQRNGN 200
R GN
Sbjct: 176 --RRGN 179
>Os08g0537900 Similar to Ethylene-responsive transcription factor 3
(Ethylene-responsive element binding factor 3) (EREBP-3)
(AtERF3)
Length = 541
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 28/50 (56%), Positives = 34/50 (68%)
Query: 137 PWGKWAAEIRDPRRAVRKWLGTFDTXXXXXXXXXXXXLEFRGARAKLNFP 186
PWGKWAAEIRDP +A R WLGTFDT + F+G++AK+NFP
Sbjct: 370 PWGKWAAEIRDPVKAARVWLGTFDTAEDAARAYDAAAVRFKGSKAKVNFP 419
>Os05g0361700 Similar to EREBP-2 protein (Fragment)
Length = 198
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 28/52 (53%), Positives = 33/52 (63%)
Query: 135 HRPWGKWAAEIRDPRRAVRKWLGTFDTXXXXXXXXXXXXLEFRGARAKLNFP 186
RPWG+WAAEIRDPR+ R WLGT+ T + RGA+AKLNFP
Sbjct: 59 RRPWGRWAAEIRDPRKGARVWLGTYATAEEAARAYDVAARDIRGAKAKLNFP 110
>Os09g0434500 Similar to Ethylene response factor 2
Length = 396
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 43/92 (46%), Gaps = 8/92 (8%)
Query: 135 HRPWGKWAAEIRDPRRAVRKWLGTFDTXXXXXXXXXXXXLEFRGARAKLNFPCSEPLPMP 194
RPWGKWAAEIRDP + VR WLGT++T + RG +AK+NFP +
Sbjct: 141 QRPWGKWAAEIRDPSKGVRVWLGTYNTAEEAARAYDAEARKIRGKKAKVNFPDEPAVAQK 200
Query: 195 SQRNGNGGDXXXXXXXXXEQMTPTLSPCSADA 226
N E++ P L C DA
Sbjct: 201 LSLKQNAA--------KQEKLAPPLKTCGDDA 224
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.318 0.132 0.433
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 9,035,618
Number of extensions: 333057
Number of successful extensions: 923
Number of sequences better than 1.0e-10: 25
Number of HSP's gapped: 942
Number of HSP's successfully gapped: 25
Length of query: 274
Length of database: 17,035,801
Length adjustment: 99
Effective length of query: 175
Effective length of database: 11,866,615
Effective search space: 2076657625
Effective search space used: 2076657625
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 155 (64.3 bits)