Os11g0168500
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to AP2 domain containing protein RAP2.6 (Fragment).
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Os11g0168500 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to AP2 domain containing protein RAP2.6 (Fragment).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 114.34 | 0.502 | 9.33 | 0.335 | 0.729 | -2.3 | 0.0888 | -0.908 | -0.258 | 11.7 | 9.742 | 342 | -- | -- |
| 114.91 | 0.499 | 9.31 | 0.478 | 0.725 | -2.31 | 0.0491 | -- | -0.221 | 11.7 | 9.666 | 344 | -- | -- |
| 114.37 | 0.498 | 9.33 | 0.341 | 0.727 | -2.3 | -- | -0.888 | -0.257 | 11.8 | 9.739 | 344 | -- | -- |
| 114.92 | 0.499 | 9.32 | 0.482 | 0.726 | -2.32 | -- | -- | -0.219 | 11.7 | 9.514 | 344 | -- | -- |
| 124.71 | 0.52 | 9.33 | 0.494 | -- | -2.38 | -- | -0.654 | -0.198 | -- | 15.85 | 662 | -- | -- |
| 171.73 | 0.614 | 9.38 | -0.0416 | 0.931 | -- | 0.585 | -- | -0.555 | 8.65 | -- | -- | -- | -- |
| 172.82 | 0.616 | 9.38 | -0.0217 | 0.927 | -- | -- | -- | -0.554 | 8.74 | -- | -- | -- | -- |
| 124.72 | 0.52 | 9.32 | 0.566 | -- | -2.24 | -- | -- | -0.176 | -- | 16.88 | 666 | -- | -- |
| 120.4 | 0.511 | 9.33 | -- | 0.717 | -2.09 | -- | -- | -0.3 | 11.4 | 8.179 | 344 | -- | -- |
| 221.54 | 0.695 | 9.4 | -0.0202 | -- | -- | -- | -- | -0.547 | -- | -- | -- | -- | -- |
| 172.84 | 0.615 | 9.38 | -- | 0.927 | -- | -- | -- | -0.552 | 8.74 | -- | -- | -- | -- |
| 131.91 | 0.535 | 9.34 | -- | -- | -1.89 | -- | -- | -0.267 | -- | 18.86 | 657 | -- | -- |
| 221.55 | 0.695 | 9.4 | -- | -- | -- | -- | -- | -0.545 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 104.78 | temperature | 20 | 1440 | > th | dose dependent | rect. | 24 | 1 |
| 16 | 108.19 | temperature | 10 | 4320 | > th | dose dependent | rect. | 24 | 1 |
| 18 | 108.25 | temperature | 10 | 4320 | > th | dose dependent | rect. | 23 | 3 |
| 22 | 108.34 | temperature | 30 | 4320 | < th | dose dependent | rect. | 23 | 3 |
| 33 | 108.71 | temperature | 25 | 4320 | < th | dose dependent | rect. | 21 | 1 |
| 36 | 108.83 | temperature | 10 | 4320 | > th | dose dependent | rect. | 21 | 5 |
| 40 | 108.89 | temperature | 30 | 4320 | < th | dose dependent | rect. | 21 | 5 |
| 299 | 111.03 | temperature | 10 | 270 | > th | dose dependent | rect. | 3 | 23 |
| 344 | 111.26 | temperature | 25 | 1440 | < th | dose dependent | sin | 13 | NA |
| 389 | 111.48 | temperature | 30 | 4320 | < th | dose dependent | rect. | 3 | 1 |
| 467 | 111.78 | temperature | 30 | 270 | < th | dose dependent | rect. | 22 | 23 |
| 476 | 111.81 | temperature | 15 | 270 | > th | dose dependent | rect. | 16 | 23 |
| 640 | 112.35 | temperature | 10 | 4320 | > th | dose dependent | sin | 12 | NA |
| 692 | 112.52 | temperature | 30 | 270 | < th | dose dependent | rect. | 24 | 23 |
| 757 | 112.76 | temperature | 20 | 1440 | > th | dose dependent | sin | 10 | NA |
| 954 | 113.30 | temperature | 10 | 720 | > th | dose dependent | rect. | 12 | 21 |