Os09g0457900
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to AP2 domain containing protein RAP2.6 (Fragment).
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Os09g0457900 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Similar to AP2 domain containing protein RAP2.6 (Fragment).
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 229.22 | 0.711 | 2.85 | 1.09 | 0.256 | -3.21 | -1.23 | 37.4 | -0.0141 | 11.2 | 32.16 | 230 | -- | -- |
| 235.91 | 0.721 | 3.01 | -0.315 | 0.209 | 1.51 | -1.32 | -- | -0.0258 | 11.1 | 32.16 | 230 | -- | -- |
| 228.28 | 0.704 | 2.94 | 0.132 | 0.295 | -3.12 | -- | 46.8 | -0.0253 | 13.8 | 34.63 | 168 | -- | -- |
| 231.05 | 0.708 | 3.01 | -0.486 | 0.293 | 2.77 | -- | -- | -0.0771 | 13.7 | 34.5 | 128 | -- | -- |
| 232.25 | 0.71 | 2.99 | -0.129 | -- | -1.9 | -- | 41 | -0.0305 | -- | 34.85 | 170 | -- | -- |
| 247.02 | 0.737 | 3.01 | -0.279 | 0.304 | -- | -1.07 | -- | -0.0503 | 12.1 | -- | -- | -- | -- |
| 250.31 | 0.741 | 3.02 | -0.316 | 0.357 | -- | -- | -- | -0.0512 | 14.1 | -- | -- | -- | -- |
| 233.9 | 0.712 | 3.01 | -0.37 | -- | 4 | -- | -- | -0.0335 | -- | 34.58 | 128 | -- | -- |
| 232.29 | 0.71 | 3 | -- | 0.309 | 3.74 | -- | -- | 0.0116 | 13.7 | 34.6 | 128 | -- | -- |
| 257.94 | 0.75 | 3.02 | -0.331 | -- | -- | -- | -- | -0.0597 | -- | -- | -- | -- | -- |
| 252.94 | 0.744 | 3.01 | -- | 0.363 | -- | -- | -- | -0.0159 | 14.1 | -- | -- | -- | -- |
| 237.53 | 0.718 | 3.01 | -- | -- | 3.95 | -- | -- | 0.00433 | -- | 34.59 | 128 | -- | -- |
| 260.83 | 0.754 | 3.01 | -- | -- | -- | -- | -- | -0.0229 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 223.17 | atmosphere | 995.0 | 10 | > th | dose independent | sin | 6 | NA |
| 7 | 225.08 | wind | 7.0 | 30 | > th | dose dependent | rect. | 19 | 1 |
| 10 | 225.66 | atmosphere | 1000.0 | 270 | < th | dose independent | rect. | 12 | 3 |
| 12 | 226.10 | wind | 7.0 | 30 | > th | dose independent | rect. | 19 | 1 |
| 14 | 226.27 | temperature | 30.0 | 10 | > th | dose dependent | rect. | 14 | 5 |
| 29 | 226.28 | temperature | 30.0 | 10 | > th | dose dependent | sin | 13 | NA |
| 32 | 226.92 | atmosphere | 1000.0 | 10 | < th | dose dependent | rect. | 14 | 2 |
| 36 | 227.02 | atmosphere | 1000.0 | 90 | < th | dose dependent | rect. | 14 | 1 |
| 37 | 227.04 | atmosphere | 1000.0 | 90 | < th | dose dependent | rect. | 13 | 4 |
| 46 | 227.37 | temperature | 30.0 | 270 | > th | dose dependent | rect. | 12 | 3 |
| 66 | 227.69 | atmosphere | 1000.0 | 10 | < th | dose dependent | rect. | 16 | 1 |
| 74 | 227.82 | temperature | 30.0 | 10 | > th | dose dependent | rect. | 14 | 2 |
| 82 | 228.30 | precipitation | 0.1 | 10 | > th | dose independent | rect. | 19 | 1 |
| 92 | 228.30 | precipitation | 0.1 | 10 | > th | dose dependent | rect. | 19 | 1 |
| 103 | 228.32 | wind | 9.0 | 270 | < th | dose independent | sin | 7 | NA |
| 127 | 228.69 | temperature | 30.0 | 30 | > th | dose dependent | rect. | 16 | 1 |
| 180 | 229.69 | precipitation | 0.1 | 10 | < th | dose independent | sin | 21 | NA |
| 181 | 229.69 | precipitation | 0.1 | 10 | < th | dose dependent | sin | 21 | NA |
| 209 | 229.96 | humidity | 50.0 | 270 | < th | dose independent | rect. | 12 | 2 |
| 279 | 230.41 | atmosphere | 1000.0 | 270 | < th | dose dependent | rect. | 12 | 1 |
| 283 | 230.47 | humidity | 50.0 | 270 | < th | dose dependent | rect. | 13 | 1 |
| 302 | 230.79 | atmosphere | 995.0 | 30 | > th | dose independent | rect. | 1 | 23 |
| 428 | 231.26 | wind | 9.0 | 270 | > th | dose independent | rect. | 18 | 19 |
| 431 | 231.27 | temperature | 30.0 | 270 | > th | dose dependent | sin | 2 | NA |
| 442 | 231.45 | precipitation | 0.1 | 10 | > th | dose independent | sin | 21 | NA |
| 446 | 231.49 | precipitation | 0.1 | 10 | > th | dose dependent | sin | 21 | NA |
| 447 | 231.52 | wind | 9.0 | 90 | > th | dose independent | rect. | 11 | 3 |
| 502 | 231.89 | wind | 9.0 | 270 | > th | dose dependent | rect. | 11 | 1 |
| 507 | 231.91 | atmosphere | 1000.0 | 30 | < th | dose independent | rect. | 13 | 5 |
| 509 | 231.91 | wind | 3.0 | 10 | > th | dose independent | rect. | 13 | 8 |
| 516 | 231.95 | wind | 9.0 | 270 | > th | dose dependent | rect. | 18 | 19 |
| 533 | 231.97 | wind | 7.0 | 90 | > th | dose dependent | rect. | 11 | 4 |
| 649 | 232.36 | wind | 9.0 | 270 | > th | dose independent | rect. | 11 | 1 |
| 665 | 232.38 | temperature | 30.0 | 270 | > th | dose dependent | no | NA | NA |
| 760 | 232.39 | humidity | 60.0 | 270 | < th | dose dependent | rect. | 11 | 4 |
| 774 | 232.44 | precipitation | 0.1 | 10 | < th | dose independent | sin | 18 | NA |
| 775 | 232.44 | precipitation | 0.1 | 10 | < th | dose dependent | sin | 18 | NA |
| 788 | 232.52 | wind | 3.0 | 270 | > th | dose dependent | rect. | 10 | 1 |
| 792 | 232.56 | wind | 9.0 | 30 | > th | dose dependent | rect. | 21 | 17 |
| 861 | 232.92 | wind | 3.0 | 10 | > th | dose independent | rect. | 15 | 6 |
| 870 | 232.97 | wind | 5.0 | 30 | > th | dose independent | rect. | 18 | 5 |
| 879 | 233.00 | wind | 9.0 | 270 | > th | dose independent | sin | 7 | NA |
| 894 | 233.12 | humidity | 60.0 | 270 | < th | dose independent | rect. | 10 | 5 |
| 900 | 233.17 | temperature | 30.0 | 270 | < th | dose independent | rect. | 6 | 9 |
| 902 | 233.20 | wind | 1.0 | 270 | > th | dose dependent | rect. | 8 | 4 |
| 913 | 233.26 | wind | 5.0 | 30 | > th | dose dependent | rect. | 18 | 5 |
| 974 | 233.43 | wind | 7.0 | 720 | < th | dose independent | rect. | 5 | 8 |