Os02g0764700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Similar to Ethylene-responsive transcription factor 4 (Ethylene-responsive element binding factor 4) (Related to APETALA-2 protein 5) (EREBP-4) (AtERF4).
FiT-DB / Search/ Help/ Sample detail
|
Os02g0764700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Similar to Ethylene-responsive transcription factor 4 (Ethylene-responsive element binding factor 4) (Related to APETALA-2 protein 5) (EREBP-4) (AtERF4).
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = wind,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 311.29 | 0.829 | 5.02 | 0.371 | 3.16 | 2.07 | 4.8 | -6.14 | -0.0463 | 15.3 | 0.5999 | 78 | -- | -- |
| 340.92 | 0.86 | 5.15 | 0.243 | 3.36 | 2.37 | 4.05 | -- | -0.131 | 15.4 | 3.366 | 76 | -- | -- |
| 366.1 | 0.891 | 5.07 | 0.41 | 3.33 | 1.98 | -- | -2.46 | -0.0762 | 15.2 | -1.967 | 139 | -- | -- |
| 372.53 | 0.899 | 5.11 | 0.376 | 3.62 | 2.1 | -- | -- | -0.0621 | 15.4 | 3.922 | 105 | -- | -- |
| 734.44 | 1.26 | 5.04 | 1.13 | -- | 5.37 | -- | -3.97 | -0.0995 | -- | -7.666 | 61 | -- | -- |
| 409.69 | 0.949 | 5.13 | -0.0944 | 4.12 | -- | 2.16 | -- | -0.13 | 15.5 | -- | -- | -- | -- |
| 424.27 | 0.965 | 5.13 | -0.0562 | 4.14 | -- | -- | -- | -0.117 | 15.5 | -- | -- | -- | -- |
| 734.18 | 1.26 | 5.11 | 1.15 | -- | 5.68 | -- | -- | -0.14 | -- | -7.489 | 61 | -- | -- |
| 374.53 | 0.901 | 5.12 | -- | 3.63 | 2.01 | -- | -- | -0.102 | 15.3 | 3.924 | 136 | -- | -- |
| 1382.51 | 1.74 | 5.13 | -0.231 | -- | -- | -- | -- | -0.227 | -- | -- | -- | -- | -- |
| 424.35 | 0.964 | 5.13 | -- | 4.14 | -- | -- | -- | -0.111 | 15.5 | -- | -- | -- | -- |
| 766.57 | 1.29 | 5.14 | -- | -- | 5.34 | -- | -- | -0.264 | -- | -2.636 | 61 | -- | -- |
| 1383.91 | 1.74 | 5.12 | -- | -- | -- | -- | -- | -0.201 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 308.48 | wind | 1 | 90 | > th | dose dependent | rect. | 21 | 23 |
| 2 | 311.27 | wind | 1 | 90 | > th | dose dependent | rect. | 6 | 21 |
| 8 | 313.08 | wind | 3 | 90 | > th | dose dependent | rect. | 16 | 23 |
| 10 | 313.56 | wind | 1 | 90 | > th | dose dependent | no | NA | NA |
| 13 | 313.93 | wind | 9 | 90 | < th | dose dependent | no | NA | NA |
| 17 | 314.69 | wind | 9 | 90 | < th | dose dependent | rect. | 19 | 23 |
| 24 | 316.60 | wind | 1 | 90 | > th | dose dependent | rect. | 13 | 23 |
| 27 | 317.03 | wind | 1 | 90 | > th | dose dependent | rect. | 1 | 23 |
| 29 | 317.14 | wind | 7 | 90 | < th | dose dependent | rect. | 3 | 23 |
| 32 | 317.72 | wind | 3 | 90 | > th | dose dependent | rect. | 16 | 21 |
| 68 | 320.39 | wind | 7 | 90 | < th | dose dependent | rect. | 15 | 23 |
| 86 | 321.89 | wind | 9 | 270 | < th | dose dependent | rect. | 10 | 23 |
| 90 | 322.34 | wind | 5 | 90 | > th | dose independent | rect. | 17 | 19 |
| 112 | 323.76 | wind | 1 | 30 | > th | dose dependent | rect. | 11 | 23 |
| 120 | 324.15 | wind | 7 | 90 | < th | dose dependent | rect. | 12 | 23 |
| 121 | 324.16 | wind | 7 | 90 | < th | dose dependent | rect. | 1 | 23 |
| 133 | 324.52 | wind | 5 | 90 | > th | dose dependent | sin | 9 | NA |
| 175 | 326.62 | wind | 5 | 90 | > th | dose independent | rect. | 16 | 23 |
| 208 | 327.69 | wind | 7 | 90 | > th | dose independent | sin | 9 | NA |
| 215 | 328.04 | wind | 5 | 90 | < th | dose independent | rect. | 19 | 23 |
| 285 | 329.65 | wind | 3 | 90 | > th | dose independent | rect. | 21 | 23 |
| 319 | 330.28 | wind | 7 | 90 | < th | dose independent | sin | 9 | NA |
| 425 | 332.58 | wind | 5 | 270 | < th | dose independent | rect. | 9 | 23 |
| 496 | 333.82 | wind | 5 | 90 | > th | dose independent | rect. | 19 | 17 |
| 552 | 334.62 | wind | 5 | 270 | < th | dose independent | rect. | 24 | 23 |
| 623 | 335.55 | wind | 5 | 270 | > th | dose dependent | rect. | 19 | 16 |
| 658 | 336.00 | wind | 5 | 270 | < th | dose independent | rect. | 12 | 23 |
| 667 | 336.06 | wind | 5 | 90 | > th | dose independent | rect. | 5 | 23 |
| 671 | 336.08 | wind | 5 | 90 | > th | dose independent | rect. | 21 | 15 |
| 695 | 336.24 | wind | 5 | 90 | < th | dose independent | no | NA | NA |
| 697 | 336.26 | wind | 5 | 90 | > th | dose independent | rect. | 3 | 23 |
| 715 | 336.41 | wind | 5 | 90 | > th | dose independent | no | NA | NA |
| 750 | 336.72 | wind | 5 | 90 | < th | dose independent | rect. | 3 | 23 |
| 761 | 336.89 | wind | 3 | 90 | > th | dose dependent | rect. | 21 | 15 |
| 768 | 336.99 | radiation | 30 | 4320 | > th | dose independent | rect. | 15 | 19 |
| 836 | 337.69 | wind | 5 | 90 | > th | dose independent | rect. | 19 | 23 |
| 862 | 337.84 | wind | 5 | 90 | > th | dose independent | rect. | 1 | 23 |
| 892 | 338.20 | wind | 7 | 720 | < th | dose independent | rect. | 18 | 21 |
| 907 | 338.53 | wind | 9 | 720 | > th | dose independent | rect. | 21 | 14 |
| 932 | 338.78 | radiation | 20 | 4320 | > th | dose independent | rect. | 15 | 17 |
| 960 | 339.07 | wind | 7 | 720 | > th | dose dependent | sin | 3 | NA |
| 974 | 339.30 | radiation | 40 | 4320 | > th | dose dependent | rect. | 9 | 1 |
| 987 | 339.41 | wind | 5 | 270 | < th | dose independent | rect. | 16 | 23 |