BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os09g0318600 Os09g0318600|AK101412
(527 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os09g0318600 Homeodomain-like containing protein 939 0.0
Os09g0317700 Homeodomain-like containing protein 580 e-165
Os11g0282700 Homeodomain-like containing protein 113 3e-25
Os06g0521000 Homeodomain-like containing protein 108 1e-23
Os01g0527800 107 2e-23
Os09g0241700 Homeodomain-like containing protein 96 7e-20
Os10g0449100 93 4e-19
Os06g0716600 89 6e-18
Os01g0385600 Homeodomain-like containing protein 86 6e-17
Os01g0821200 85 1e-16
Os01g0261900 80 4e-15
Os02g0466700 79 7e-15
Os08g0178900 Homeodomain-like containing protein 77 4e-14
Os06g0534700 74 2e-13
Os11g0514200 74 3e-13
Os01g0549300 Homeodomain-like containing protein 74 3e-13
Os04g0286500 Homeodomain-like containing protein 72 1e-12
Os01g0373400 Homeodomain-like containing protein 67 3e-11
Os10g0410300 Homeodomain-like containing protein 65 9e-11
>Os09g0318600 Homeodomain-like containing protein
Length = 527
Score = 939 bits (2426), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 456/527 (86%), Positives = 456/527 (86%)
Query: 1 MGPRPPGGSSDKKSCQNVTPDKDSSMNFCHQQYPQHLFSQPPYAMNXXXXXXXXXXXXTQ 60
MGPRPPGGSSDKKSCQNVTPDKDSSMNFCHQQYPQHLFSQPPYAMN TQ
Sbjct: 1 MGPRPPGGSSDKKSCQNVTPDKDSSMNFCHQQYPQHLFSQPPYAMNFPFPPFPHYPPYTQ 60
Query: 61 NLQYAVXXXXXXXXXXXXXGAMPSTFLPAPVIPSKAPSDQGTPRSITGPGEQGTDNAEPE 120
NLQYAV GAMPSTFLPAPVIPSKAPSDQGTPRSITGPGEQGTDNAEPE
Sbjct: 61 NLQYAVPPQYAPYTLPPPAGAMPSTFLPAPVIPSKAPSDQGTPRSITGPGEQGTDNAEPE 120
Query: 121 KATKRLYWTEKEDIRLISAWLIYYKTDRYWEKVVAEYNSTIPATRRRELQHVKGHWHKIF 180
KATKRLYWTEKEDIRLISAWLIYYKTDRYWEKVVAEYNSTIPATRRRELQHVKGHWHKIF
Sbjct: 121 KATKRLYWTEKEDIRLISAWLIYYKTDRYWEKVVAEYNSTIPATRRRELQHVKGHWHKIF 180
Query: 181 RKVAHFHDCWCRVKAKYPSGHSEGMQLMDKTWLMYNEEARVMYLEEAEHNFAFDHCWKAV 240
RKVAHFHDCWCRVKAKYPSGHSEGMQLMDKTWLMYNEEARVMYLEEAEHNFAFDHCWKAV
Sbjct: 181 RKVAHFHDCWCRVKAKYPSGHSEGMQLMDKTWLMYNEEARVMYLEEAEHNFAFDHCWKAV 240
Query: 241 WNQPKWKAYMSCLFTKRTMQXXXXXXXXXXXXXXXXPGKEIGEEVCMTSKEAKVKRSTSS 300
WNQPKWKAYMSCLFTKRTMQ PGKEIGEEVCMTSKEAKVKRSTSS
Sbjct: 241 WNQPKWKAYMSCLFTKRTMQSDSWEYMSSSEDSEEMPGKEIGEEVCMTSKEAKVKRSTSS 300
Query: 301 SEMQEDMLIKNPEELTEVEPSISNEKLLLASLKQQDACTKDTGISKKQSELLTADTSWPT 360
SEMQEDMLIKNPEELTEVEPSISNEKLLLASLKQQDACTKDTGISKKQSELLTADTSWPT
Sbjct: 301 SEMQEDMLIKNPEELTEVEPSISNEKLLLASLKQQDACTKDTGISKKQSELLTADTSWPT 360
Query: 361 GFRLVDTSELNEHQQGLAVRDDMLEKESRPQGFDAQDNERATRENIPRKETQPRICKAPX 420
GFRLVDTSELNEHQQGLAVRDDMLEKESRPQGFDAQDNERATRENIPRKETQPRICKAP
Sbjct: 361 GFRLVDTSELNEHQQGLAVRDDMLEKESRPQGFDAQDNERATRENIPRKETQPRICKAPK 420
Query: 421 XXXXXXXXXXXXXCEVQEDIKHAMHLQTMLNNDRVKMSEVQLRLSKEQLELARIKQEEAR 480
CEVQEDIKHAMHLQTMLNNDRVKMSEVQLRLSKEQLELARIKQEEAR
Sbjct: 421 FSRKRKGKASSSSCEVQEDIKHAMHLQTMLNNDRVKMSEVQLRLSKEQLELARIKQEEAR 480
Query: 481 XXXXXXXXXXXXXXXXADTSRFDEFQKAEYEKALRHIGGMLFSKDGN 527
ADTSRFDEFQKAEYEKALRHIGGMLFSKDGN
Sbjct: 481 EKKETTLYKKYTELLLADTSRFDEFQKAEYEKALRHIGGMLFSKDGN 527
>Os09g0317700 Homeodomain-like containing protein
Length = 495
Score = 580 bits (1494), Expect = e-165, Method: Compositional matrix adjust.
Identities = 303/542 (55%), Positives = 349/542 (64%), Gaps = 62/542 (11%)
Query: 1 MGPRPPGGSSDKKSCQNVTPDKDSSMNFCHQQYPQHLFSQPPYAMNXXXXXXXXXXXXTQ 60
MGP PP SDKK+CQNV P+K SS +FCH Q+PQHL S P YAMN +Q
Sbjct: 1 MGPHPPSSYSDKKTCQNVPPEKPSSTSFCHPQFPQHLLSHPAYAMNFPFPPFPHYPPYSQ 60
Query: 61 NLQYAVXXXXXXXXXXXXXGAMPSTFLPAPVIPSKAPSDQGTPRSITGPGEQGTDNAEPE 120
N QYAV GAMPS ++PA V+PSKAPSDQGTP S+TGPG+Q D+AEPE
Sbjct: 61 NFQYAVPPQYAPYSLPPPDGAMPSPYVPATVMPSKAPSDQGTPHSVTGPGQQDDDDAEPE 120
Query: 121 KATKRLYWTEKEDIRLISAWLIYYKTDRYWEKVVAEYNSTIPATRRRELQHVKGHWHKIF 180
+ +RL WTE+EDIRLIS WLI YKTD+YW+KV AEYNS P RRRE++H+K W ++
Sbjct: 121 RTARRLAWTEEEDIRLISTWLINYKTDKYWDKVAAEYNSATPGARRREVKHLKNRWQRMI 180
Query: 181 RKVAHFHDCWCRVKAKYPSGHSEGMQLMDKTWLMYNEEARVMYLEEAEHNFAFDHCWKAV 240
KVAHF+DCWCRV AKYPSG SEGMQ MDKTWLMYN+EA VMYLEEA+H F F HCW AV
Sbjct: 181 NKVAHFNDCWCRVMAKYPSGQSEGMQQMDKTWLMYNKEAHVMYLEEAKHKFTFGHCWNAV 240
Query: 241 WNQPKWKAYMSCLFTKRTMQXXXXXXXXXXXXXXXXPGKEIGEEVCMTSKEAKVKRSTSS 300
W+QPKWK Y+S KR M+ E G V S S
Sbjct: 241 WDQPKWKEYISSFSAKRVMRS------------------ESG---------GYVSSSEDS 273
Query: 301 SEMQE--------DMLIKNPEELTEVEPSISNEKLLLASLKQQDACTKDTGISKKQSELL 352
+MQE DML KN E++TEV+PS+SN+ KKQ ELL
Sbjct: 274 EDMQEGKCLVDPLDMLPKNHEDMTEVQPSVSNQ--------------------KKQLELL 313
Query: 353 TADTSWPTGFRL------VDTSELNEHQQGLAVRDDMLEKESRPQGFDAQDNERATRENI 406
TAD SWP F+L TS+LNEHQQG+AVRD+MLEKES PQ F+ DNER RE+
Sbjct: 314 TADASWPIEFQLGRHQLMTGTSKLNEHQQGVAVRDEMLEKESGPQDFEVLDNERVAREDE 373
Query: 407 PRKETQP-RICKAPXXXXXXXXXXXXXXCEVQEDIKHAMHLQTMLNNDRVKMSEVQLRLS 465
P+KETQP + KA CEVQEDIKHA++LQTMLNNDR KMSEVQLRLS
Sbjct: 374 PKKETQPHQGFKARKVNRKRKGKASSSSCEVQEDIKHALYLQTMLNNDREKMSEVQLRLS 433
Query: 466 KEQLELARIKQEEARXXXXXXXXXXXXXXXXADTSRFDEFQKAEYEKALRHIGGMLFSKD 525
KEQLELARIKQ+EA ADTSRFDEFQKAEYEKAL+HIGG+LFSKD
Sbjct: 434 KEQLELARIKQDEANVKKETALYMKYTELLLADTSRFDEFQKAEYEKALKHIGGILFSKD 493
Query: 526 GN 527
N
Sbjct: 494 VN 495
>Os11g0282700 Homeodomain-like containing protein
Length = 514
Score = 113 bits (283), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 70/181 (38%), Positives = 95/181 (52%), Gaps = 26/181 (14%)
Query: 89 APVIPSKAPSDQGTPRSITGPGEQ-------GTDNAEPEKATKRLYWTEKEDIRLISAWL 141
AP PS P++ +P + +GPGEQ G + + KRL WT +EDIRL+SAWL
Sbjct: 134 APWAPS--PAEYRSPVTKSGPGEQHPINIDSGGEETPTVRTEKRLTWTHEEDIRLVSAWL 191
Query: 142 I---------YYKTDRYWEKVVAEYNSTIPATRRRELQHVKGHWHKIFRKVAHFHDCWCR 192
+ K D YW V YNST P R R+ + +K +HKI + V F +
Sbjct: 192 NNLNDSINGNFKKNDCYWGDVTTAYNSTTPRNRMRQEKQIKDRFHKIKKNVGRFCCAYKE 251
Query: 193 VKAKYPSGHSEGMQLMDKTWLMYNEEARVMYLEEAEHNFAFDHCWKAVWNQPKWKAYMSC 252
VK+ Y SG +E +QLM+K Y + + E F F HCWKA+ +QPKW AY+
Sbjct: 252 VKSIYVSGQNE-LQLMEKVHATYEADYK-------EGQFTFLHCWKALRDQPKWHAYLEE 303
Query: 253 L 253
L
Sbjct: 304 L 304
>Os06g0521000 Homeodomain-like containing protein
Length = 291
Score = 108 bits (270), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 67/179 (37%), Positives = 93/179 (51%), Gaps = 24/179 (13%)
Query: 91 VIPSKAPSDQGTPRSITGPGEQ-------GTDNAEPEKATKRLYWTEKEDIRLISAWLI- 142
V P+ P++Q P S PG Q G + A + KRL W+ +EDIRL+SAWL
Sbjct: 111 VPPNYYPAEQVAPCSKLRPGAQQPVNIDSGDEEAHTVRTEKRLTWSTEEDIRLVSAWLNN 170
Query: 143 --------YYKTDRYWEKVVAEYNSTIPATRRRELQHVKGHWHKIFRKVAHFHDCWCRVK 194
+ K DRYW V AEYNST P R R+ + +K +HKI + V F + VK
Sbjct: 171 SNDSISGNFKKNDRYWGDVTAEYNSTTPKNRTRQEKQIKDRFHKIKKNVGRFCCVYKEVK 230
Query: 195 AKYPSGHSEGMQLMDKTWLMYNEEARVMYLEEAEHNFAFDHCWKAVWNQPKWKAYMSCL 253
+ Y SG ++ MQL +K Y + + E F+F HCW + +QPKW +Y+ L
Sbjct: 231 SIYVSGQND-MQLREKAEAAYQADYK-------EGPFSFLHCWNILRDQPKWHSYLEEL 281
>Os01g0527800
Length = 484
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 66/179 (36%), Positives = 92/179 (51%), Gaps = 24/179 (13%)
Query: 91 VIPSKAPSDQGTPRSITGPGEQ-------GTDNAEPEKATKRLYWTEKEDIRLISAWLI- 142
V P+ P++Q P S PG Q G + A + KRL W+ +EDIRL+SAWL
Sbjct: 111 VPPNYYPAEQVAPCSKLHPGAQQPVNIDSGDEEAPNVRTEKRLTWSTEEDIRLVSAWLNN 170
Query: 143 --------YYKTDRYWEKVVAEYNSTIPATRRRELQHVKGHWHKIFRKVAHFHDCWCRVK 194
+ K D YW V AEYNST P R R+ + +K +HKI + V F + VK
Sbjct: 171 SNDSISGNFKKNDCYWGDVTAEYNSTTPKNRTRQEKQIKDRFHKIKKNVGRFCCVYKEVK 230
Query: 195 AKYPSGHSEGMQLMDKTWLMYNEEARVMYLEEAEHNFAFDHCWKAVWNQPKWKAYMSCL 253
+ Y +G ++ MQL +K Y + + E F+F HCW + +QPKW AY+ L
Sbjct: 231 SIYVNGQND-MQLREKAEAAYQADYK-------EGPFSFLHCWNILRDQPKWHAYLEEL 281
>Os09g0241700 Homeodomain-like containing protein
Length = 315
Score = 95.9 bits (237), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 56/147 (38%), Positives = 74/147 (50%), Gaps = 17/147 (11%)
Query: 116 NAEPEKATKRLYWTEKEDIRLISAWLI---------YYKTDRYWEKVVAEYNSTIPATRR 166
N + KRL W + ED+RLISAWL + K D+YW V A YNST P R
Sbjct: 44 NGHVARTDKRLSWMKDEDLRLISAWLNNSNDPIESNFKKNDKYWGDVAAAYNSTTPKNRA 103
Query: 167 RELQHVKGHWHKIFRKVAHFHDCWCRVKAKYPSGHSEGMQLMDKTWLMYNEEARVMYLEE 226
R ++ VK + KI +KV +F W V + Y SG S LM+K +Y + +
Sbjct: 104 RLVKQVKDRFGKIRKKVGNFCCSWKEVNSLYASGES-NEDLMNKAQKIYENDFK------ 156
Query: 227 AEHNFAFDHCWKAVWNQPKWKAYMSCL 253
+ F F HCW + QPKW AY+ L
Sbjct: 157 -DGPFLFMHCWNELKKQPKWHAYLEQL 182
>Os10g0449100
Length = 424
Score = 93.2 bits (230), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 77/257 (29%), Positives = 115/257 (44%), Gaps = 50/257 (19%)
Query: 115 DNAEPEKATKRLYWTEKEDIRLISAWLIYY---------KTDRYWEKVVAEYNSTIPATR 165
D+ + + KRL W ED+RL+SAWL + K + YW VV YNST P R
Sbjct: 135 DDGDDVRTAKRLTWASDEDLRLVSAWLYHSNDPINGNGKKNESYWGDVVELYNSTTPINR 194
Query: 166 RRELQHVKGHWHKIFRKVAHFHDCWCRVKAKYPSGHSEGMQLMDKTWLMYNEEARVMYLE 225
+RE++H+K W +I R V F W + Y SG+S+ QL D A Y++
Sbjct: 195 KREVKHLKDRWQRIKRWVGFFCASWKKAALVYTSGYSDD-QLRD--------FANQFYVD 245
Query: 226 EA--EHNFAFDHCWKAVWNQPKWKAYMSCLFT--KRTMQXXXXXXXXXXXXXXXXPGKEI 281
+ E F HCWK + ++PKW A + L KR++ K+I
Sbjct: 246 DYPNEGPFTVLHCWKVLRDEPKWHAVLEELEKPHKRSLDDGSDTLSQ----------KDI 295
Query: 282 GE-EVCMTSKEAKVKRS--------TSSSEMQEDM---------LIKNPEELTEVEPSIS 323
GE E + EAK +R+ ++EDM K EE + IS
Sbjct: 296 GEKERPIGRNEAKKQRNGKGKGKGKDDDDSLREDMKKYMDVQAAASKRHEEFLGTQHRIS 355
Query: 324 NEKLLLASLKQQDACTK 340
+ K+ +A L+++ T+
Sbjct: 356 DAKVEVARLRREAVLTE 372
>Os06g0716600
Length = 542
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 88/183 (48%), Gaps = 23/183 (12%)
Query: 89 APVIPSKAPSDQGTPRSITGPGEQGTDNA-EPEKATKRLYWTEKEDIRLISAWLIYY--- 144
+P +++ D TP S D+ E + KR++WT++ED+R++S+WL+
Sbjct: 104 SPSDQNQSEDDYSTPISARDNTYVNVDSGDETPRTEKRIFWTQEEDVRMMSSWLLNSTDS 163
Query: 145 ------KTDRYWEKVVAEYNSTIPATRRRELQHVKGHWHKIFRKVAHFHDCWCRVKAKYP 198
K ++YW V A YN T P+ RRR + +K +HK+ + FH W + + Y
Sbjct: 164 TVGADRKNEQYWTDVEATYNETTPSHRRRNAKQIKDRFHKVNKWTDLFHSAWLKARMIYT 223
Query: 199 SGHSEGMQLMDKTWLMYNEEARVMYLEEAEH----NFAFDHCWKAVWNQPKWKAYMSCLF 254
SG++ D+ W+ E+A V Y+++ E F W V + KW Y + L
Sbjct: 224 SGYN------DQMWI---EKAHVFYIKDNEKLNLGPFVLMEVWNTVKTEAKWITYNNGLK 274
Query: 255 TKR 257
R
Sbjct: 275 AAR 277
>Os01g0385600 Homeodomain-like containing protein
Length = 211
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 50/148 (33%), Positives = 74/148 (50%), Gaps = 17/148 (11%)
Query: 115 DNAEPEKATKRLYWTEKEDIRLISAWLI---------YYKTDRYWEKVVAEYNSTIPATR 165
+N + KRL W+ +ED+RL+SAWL + K D+YW V A YNST P++R
Sbjct: 63 NNGNSTRTEKRLGWSTEEDLRLVSAWLNNSNDPIESNFKKNDKYWADVAAAYNSTTPSSR 122
Query: 166 RRELQHVKGHWHKIFRKVAHFHDCWCRVKAKYPSGHSEGMQLMDKTWLMYNEEARVMYLE 225
R+++ VK + KI +KV +F W + Y SG + LM K +Y + +
Sbjct: 123 FRQVKQVKDRFSKIKKKVGNFCCSWKEANSLYASGEC-NVDLMAKAQKIYENDFK----- 176
Query: 226 EAEHNFAFDHCWKAVWNQPKWKAYMSCL 253
+ F CW + QPK AY+ L
Sbjct: 177 --DGPFLLTQCWNELKTQPKCHAYLDQL 202
>Os01g0821200
Length = 356
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 79/274 (28%), Positives = 118/274 (43%), Gaps = 56/274 (20%)
Query: 115 DNAEPEKATKRLYWTEKEDIRLISAWLIYY---------KTDRYWEKVVAEYNSTIPATR 165
D+ + + KRL W ED+RL+SAWL + K + Y VV YN+T P R
Sbjct: 82 DDGDNVRTAKRLTWASDEDLRLVSAWLYHSNDPINGNGKKNESYRGDVVELYNNTTPINR 141
Query: 166 RRELQHVKGHWHKIFRKVAHFHDCWCRVKAKYPSGHSEGMQLMDKTWLMYNEEARVMYLE 225
+RE++H+K W +I R V F W + Y SG+S+ QL D A Y+
Sbjct: 142 KREVKHLKDQWQRIKRWVGFFCASWKKAALVYTSGYSDD-QLRD--------FANQFYVN 192
Query: 226 E--AEHNFAFDHCWKAVWNQPKWKAYMSCLFT--KRTMQXXXXXXXXXXXXXXXXPGKEI 281
+ E F H WK + ++PKW A + L KR++ K+I
Sbjct: 193 DYPNEGPFTVLHYWKVLHDEPKWHAVLEELEKPHKRSLDDGSDTLSQ----------KDI 242
Query: 282 GE-EVCMTSKEAKVKRS--------TSSSEMQEDM---------LIKNPEELTEVEPSIS 323
GE E M EAK +R+ + EDM K EE + IS
Sbjct: 243 GEKERPMGRNEAKKQRNGKGKGKGKDDDDSLHEDMKKYMDVQAAASKRHEEFLGTQHRIS 302
Query: 324 NEKLLLASLKQQDACTKDTGISKKQSELLTADTS 357
+ K+ +A L+++ T + +L++ DTS
Sbjct: 303 DAKVEVARLRREAVLT------ESYQKLMSMDTS 330
>Os01g0261900
Length = 193
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 45/116 (38%), Positives = 61/116 (52%), Gaps = 10/116 (8%)
Query: 114 TDNAEPEKATKRLYWTEKEDIRLISAWLI---------YYKTDRYWEKVVAEYNSTIPAT 164
+N + + KRL WT ED+RLISAWL + K D+YW V A YNST P +
Sbjct: 61 VENGDISRTKKRLLWTNDEDLRLISAWLNNSNDSIESNFKKNDKYWGDVAAAYNSTTPKS 120
Query: 165 RRRELQHVKGHWHKIFRKVAHFHDCWCRVKAKYPSGHSEGMQLMDKTWLMYNEEAR 220
R R+++ VK + KI +KV +F W + Y SG S LM K MY + +
Sbjct: 121 RVRQVKQVKDRFGKIKKKVGNFCCSWKEANSLYASGESHD-DLMAKAVKMYENDFK 175
>Os02g0466700
Length = 686
Score = 79.3 bits (194), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 80/148 (54%), Gaps = 19/148 (12%)
Query: 111 EQGTDNA-EPEKATKRLYWTEKEDIRLISAWLIYY---------KTDRYWEKVVAEYNS- 159
E+ +DN+ E + R+ WTE+E+IRL+S+WL K + YW+ V E+NS
Sbjct: 399 EESSDNSQEAGRRGTRVNWTEEENIRLLSSWLNNSVDPINGNDKKAEYYWKAVAVEFNSN 458
Query: 160 TIPATRRRELQHVKGHWHKIFRKVAHFHDCWCRVKAKYPSGHSEGMQLMDKTWLMYNEEA 219
T + R+R + K HW + +++ F + R ++ + SG+S+ M +M+K +M+
Sbjct: 459 TSRSNRKRTVVQCKTHWGGVKKEIGKFCGAYSRARSTFSSGYSDDM-IMEKAHIMFKS-- 515
Query: 220 RVMYLEEAEHNFAFDHCWKAVWNQPKWK 247
E E F ++ W+ + +QPKW+
Sbjct: 516 -----ENNEKPFTLEYMWRELKDQPKWR 538
>Os08g0178900 Homeodomain-like containing protein
Length = 389
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 49/141 (34%), Positives = 69/141 (48%), Gaps = 20/141 (14%)
Query: 121 KATKRLYWTEKEDIRLISAWLIYYKTD----------RYWEKVVAEYNSTIPATRRRELQ 170
+ KR+ WTE+EDIRL+SAW I + TD +YW +VV YN T P R+R L+
Sbjct: 93 RTEKRILWTEEEDIRLMSAW-IEHSTDSTCGADKGGGQYWGEVVESYNKTTPPLRKRNLK 151
Query: 171 HVKGHWHKIFRKVAHFHDCWCRVKAKYPSGHSEGMQL--MDKTWLMYNEEARVMYLEEAE 228
K WHKI R F + + + + SG+S M + K ++ N+EA++
Sbjct: 152 QCKDRWHKINRWTDLFECAYVKARRIFTSGYSNQMWIDAAHKFYVDDNKEAKL------- 204
Query: 229 HNFAFDHCWKAVWNQPKWKAY 249
F WK KWK Y
Sbjct: 205 GPFVLMEVWKICREVSKWKTY 225
>Os06g0534700
Length = 409
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 77/148 (52%), Gaps = 26/148 (17%)
Query: 114 TDNAEPEKATKRLYWTEKEDIRLISAWLIYY---------KTDRYWEKVVAEYNSTIPAT 164
+D++E + R+ WTE ++IRL+S+WL K+++YW+ V E+NS +P+
Sbjct: 149 SDSSEEGRRGTRINWTEDDNIRLMSSWLNNSVDPIKGNDKKSEQYWKAVAREFNSNMPSN 208
Query: 165 -RRRELQHVKGHWHKIFRKVAHFHDCWCRVKAKYPSGHSEGMQLMDKTWLMYNEEARVMY 223
+R + + HW + R V F + + + + SG+S+ M + E+AR Y
Sbjct: 209 GNKRNPKQCRTHWDNVKRDVTKFCGFYSKARTTFTSGYSDDMIM---------EKAREWY 259
Query: 224 LEEAEHN----FAFDHCWKAVWNQPKWK 247
+HN F ++ WK + +QPKW+
Sbjct: 260 ---KKHNNQKPFTLEYMWKDLKDQPKWR 284
>Os11g0514200
Length = 409
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 77/148 (52%), Gaps = 26/148 (17%)
Query: 114 TDNAEPEKATKRLYWTEKEDIRLISAWLIYY---------KTDRYWEKVVAEYNSTIPAT 164
+D++E + R+ WTE ++IRL+S+WL K+++YW+ V E+NS +P+
Sbjct: 149 SDSSEEGRRGTRINWTEDDNIRLMSSWLNNSVDPIKGNDKKSEQYWKAVAREFNSNMPSN 208
Query: 165 -RRRELQHVKGHWHKIFRKVAHFHDCWCRVKAKYPSGHSEGMQLMDKTWLMYNEEARVMY 223
+R + + HW + R V F + + + + SG+S+ M + E+AR Y
Sbjct: 209 GNKRNPKQCRTHWDNVKRDVTKFCGFYSKARTTFTSGYSDDMIM---------EKAREWY 259
Query: 224 LEEAEHN----FAFDHCWKAVWNQPKWK 247
+HN F ++ WK + +QPKW+
Sbjct: 260 ---KKHNNQKPFTLEYMWKDLKDQPKWR 284
>Os01g0549300 Homeodomain-like containing protein
Length = 389
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 50/149 (33%), Positives = 70/149 (46%), Gaps = 20/149 (13%)
Query: 121 KATKRLYWTEKEDIRLISAWLIYYKTD----------RYWEKVVAEYNSTIPATRRRELQ 170
+ KR+ WTE+EDI L+SAW I + TD +YW +VV YN T P R+R L+
Sbjct: 93 RTEKRILWTEEEDIILMSAW-IEHSTDSTCGADKGGGQYWGEVVESYNKTTPPLRKRNLK 151
Query: 171 HVKGHWHKIFRKVAHFHDCWCRVKAKYPSGHSEGMQL--MDKTWLMYNEEARVMYLEEAE 228
K WHKI R F + + + + SG+S M + K ++ N+EA++
Sbjct: 152 QCKDRWHKINRWTDLFECAYVKARRIFTSGYSNQMWIDAAHKFYVDDNKEAKL------- 204
Query: 229 HNFAFDHCWKAVWNQPKWKAYMSCLFTKR 257
F WK KWK Y L R
Sbjct: 205 GPFVLMEVWKICREVSKWKTYNDNLRNAR 233
>Os04g0286500 Homeodomain-like containing protein
Length = 417
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 75/151 (49%), Gaps = 19/151 (12%)
Query: 111 EQGTDNA-EPEKATKRLYWTEKEDIRLISAWLIYY---------KTDRYWEKVVAEYNST 160
E+ +DN+ E + + WTE+E++RL+S+WL K + YW V AE+N
Sbjct: 136 EESSDNSQETGRRGTHVNWTEEENLRLLSSWLNNSLDSINGNDKKGEYYWRDVAAEFNGN 195
Query: 161 IPA-TRRRELQHVKGHWHKIFRKVAHFHDCWCRVKAKYPSGHSEGMQLMDKTWLMYNEEA 219
+ R+R + K HW + + +A F + R + + SG S+ M +M+K +Y E
Sbjct: 196 ASSNNRKRTVVQCKTHWGGVKKDIAKFCGAYSRARRTWSSGFSDDM-IMEKAHALYKSEN 254
Query: 220 RVMYLEEAEHNFAFDHCWKAVWNQPKWKAYM 250
+ F ++ W+ + +QPKW+ +
Sbjct: 255 N-------DKTFTLEYMWRELKDQPKWRRIL 278
>Os01g0373400 Homeodomain-like containing protein
Length = 376
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/158 (31%), Positives = 72/158 (45%), Gaps = 21/158 (13%)
Query: 112 QGTDNAEPEKATKRLYWTEKEDIRLISAWLIYYKTD----------RYWEKVVAEYNSTI 161
G D+ EK R+ WT ED+R++SAWL + TD +YW +VV YN T
Sbjct: 158 HGNDSVRTEK---RIMWTPDEDVRVMSAWL-EHSTDFTCGADKGGVQYWGEVVETYNKTT 213
Query: 162 PATRRRELQHVKGHWHKIFRKVAHFHDCWCRVKAKYPSGHSEGMQL--MDKTWLMYNEEA 219
P RRR + K W+KI + F + + + + SG+S M L K ++ N+E
Sbjct: 214 PPLRRRNAKQCKDRWNKINKWTDLFECAYAKARRVFTSGYSAEMWLDAAHKFYVDDNKEC 273
Query: 220 RVMYLEEAEHNFAFDHCWKAVWNQPKWKAYMSCLFTKR 257
+ + + WK + PKWK Y L R
Sbjct: 274 K-----DVVGPYMLTEVWKICRDVPKWKTYNENLKNAR 306
>Os10g0410300 Homeodomain-like containing protein
Length = 293
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 65/133 (48%), Gaps = 20/133 (15%)
Query: 125 RLYWTEKEDIRLISAWLIYYKTD----------RYWEKVVAEYNSTIPAT-RRRELQHVK 173
R+ WTE+E++ L+S W I+Y TD YW+ V +N++ P +R ++ +K
Sbjct: 57 RINWTEEENLHLLSYW-IHYSTDPVKGIDRKSEFYWKAVADVFNTSAPTNGHKRSVKQLK 115
Query: 174 GHWHKIFRKVAHFHDCWCRVKAKYPSGHSEGMQLMDKTWLMYNEEARVMYLEEAEHNFAF 233
HW + R + F + R+KA + SG S+ M + N + E + F
Sbjct: 116 THWGDVKRDITKFCGVYGRLKATWKSGQSDDMVM--------NSAHAIFEKENKDKPFTL 167
Query: 234 DHCWKAVWNQPKW 246
++ W+ V + PKW
Sbjct: 168 EYMWREVKDLPKW 180
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.314 0.129 0.389
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 16,204,349
Number of extensions: 613209
Number of successful extensions: 1850
Number of sequences better than 1.0e-10: 19
Number of HSP's gapped: 1813
Number of HSP's successfully gapped: 19
Length of query: 527
Length of database: 17,035,801
Length adjustment: 105
Effective length of query: 422
Effective length of database: 11,553,331
Effective search space: 4875505682
Effective search space used: 4875505682
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.5 bits)
S2: 158 (65.5 bits)