BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os08g0118000 Os08g0118000|AK068379
(372 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os08g0118000 HMG-I and HMG-Y, DNA-binding domain containing... 533 e-152
Os02g0125200 HMG-I and HMG-Y, DNA-binding domain containing... 275 3e-74
Os08g0512400 HMG-I and HMG-Y, DNA-binding domain containing... 166 4e-41
Os10g0572900 Protein of unknown function DUF296 domain cont... 158 7e-39
Os09g0491708 HMG-I and HMG-Y, DNA-binding domain containing... 157 1e-38
Os11g0149100 Protein of unknown function DUF296 domain cont... 157 2e-38
Os12g0147000 Protein of unknown function DUF296 domain cont... 152 4e-37
Os04g0589900 HMG-I and HMG-Y, DNA-binding domain containing... 150 1e-36
Os02g0824300 HMG-I and HMG-Y, DNA-binding domain containing... 149 3e-36
Os06g0326000 HMG-I and HMG-Y, DNA-binding domain containing... 106 2e-23
Os04g0683900 HMG-I and HMG-Y, DNA-binding domain containing... 93 4e-19
Os02g0448000 Protein of unknown function DUF296 domain cont... 77 3e-14
Os02g0820800 HMG-I and HMG-Y, DNA-binding domain containing... 73 3e-13
Os04g0590200 Protein of unknown function DUF296 domain cont... 72 6e-13
Os08g0159700 Protein of unknown function DUF296 domain cont... 69 6e-12
Os08g0563200 Protein of unknown function DUF296 domain cont... 69 8e-12
Os03g0270000 Protein of unknown function DUF296 domain cont... 67 2e-11
Os09g0464300 66 3e-11
Os06g0136900 Protein of unknown function DUF296 domain cont... 65 8e-11
>Os08g0118000 HMG-I and HMG-Y, DNA-binding domain containing protein
Length = 372
Score = 533 bits (1374), Expect = e-152, Method: Compositional matrix adjust.
Identities = 283/372 (76%), Positives = 283/372 (76%)
Query: 1 MEAKSGXXXXXXXXXXXXXXXXXXXFQPQAAVAEQXXXXXXXXXXXXXXXXXXXXXXXXX 60
MEAKSG FQPQAAVAEQ
Sbjct: 1 MEAKSGEASVAPVAVATEATAATVSFQPQAAVAEQGSSSGGVLVPPPPMAAGGGGVVVAA 60
Query: 61 XXXXXXXXXXXXXXXXXXYGPDGSLIRPLNATPISASVPMAASAVGPYTPASAVGAAMKR 120
YGPDGSLIRPLNATPISASVPMAASAVGPYTPASAVGAAMKR
Sbjct: 61 APVAGVVKVGKKRGRPRKYGPDGSLIRPLNATPISASVPMAASAVGPYTPASAVGAAMKR 120
Query: 121 GRGRPLDFASTAKLXXXXXXXXXXXXXXFGFHFDSIGEMVACSAGANFTPHIITVAPGED 180
GRGRPLDFASTAKL FGFHFDSIGEMVACSAGANFTPHIITVAPGED
Sbjct: 121 GRGRPLDFASTAKLHHHHQHQHHHQQQQFGFHFDSIGEMVACSAGANFTPHIITVAPGED 180
Query: 181 VTMKVISFSQQGPRAICILSANGVISNVTLRQPDSSGGTLTYEGRFELLSLSGSFMPTEN 240
VTMKVISFSQQGPRAICILSANGVISNVTLRQPDSSGGTLTYEGRFELLSLSGSFMPTEN
Sbjct: 181 VTMKVISFSQQGPRAICILSANGVISNVTLRQPDSSGGTLTYEGRFELLSLSGSFMPTEN 240
Query: 241 SGTRSRSGGMSVSLASPDGRXXXXXXXXXXXXXSPVQIVVGSFLPSYQMEQKNKKPRVEA 300
SGTRSRSGGMSVSLASPDGR SPVQIVVGSFLPSYQMEQKNKKPRVEA
Sbjct: 241 SGTRSRSGGMSVSLASPDGRVVGGGVAGLLVAASPVQIVVGSFLPSYQMEQKNKKPRVEA 300
Query: 301 APALAQTPPAVPISSTDTHSSEQGQHSSVAPRTTNIVTSAYNPDQSWASPAQSIPDSART 360
APALAQTPPAVPISSTDTHSSEQGQHSSVAPRTTNIVTSAYNPDQSWASPAQSIPDSART
Sbjct: 301 APALAQTPPAVPISSTDTHSSEQGQHSSVAPRTTNIVTSAYNPDQSWASPAQSIPDSART 360
Query: 361 PSGDVKVTASGA 372
PSGDVKVTASGA
Sbjct: 361 PSGDVKVTASGA 372
>Os02g0125200 HMG-I and HMG-Y, DNA-binding domain containing protein
Length = 388
Score = 275 bits (704), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 159/265 (60%), Positives = 179/265 (67%), Gaps = 17/265 (6%)
Query: 79 YGPDGSLIRPLNATPISASVPMAASAVGPYTPASAVGAAMKRGRGRPLDFASTAKLXXXX 138
YGPDGSL+RPL ATPISASVP S G YTPA+AVGA MKRGRGRP+ F S A
Sbjct: 76 YGPDGSLLRPLKATPISASVP-DDSGGGQYTPAAAVGAVMKRGRGRPVGFVSRASPVSVA 134
Query: 139 XXXXXXXXXXFGFH--------FDSIGEMVACSAGANFTPHIITVAPGEDVTMKVISFSQ 190
+GE+VAC++GANFTPHII VA GEDV MKVISFSQ
Sbjct: 135 VTAATSTAAVVVSSPATHTQTPLGPLGELVACASGANFTPHIINVAAGEDVNMKVISFSQ 194
Query: 191 QGPRAICILSANGVISNVTLRQPDSSGGTLTYEGRFELLSLSGSFMPTENSGTRSRSGGM 250
QGPRAICILSANGVISNVTLRQ D+ GGT+TYEGRFELLSLSGSF PT++ GTRSRSGGM
Sbjct: 195 QGPRAICILSANGVISNVTLRQQDTLGGTVTYEGRFELLSLSGSFTPTDSGGTRSRSGGM 254
Query: 251 SVSLASPDGRXXXXXXXXXXXXXSPVQIVVGSFLPSYQMEQK-NKKPRVEAAPALAQTPP 309
SVSLA+ DGR SPVQ+VVGSFLPSYQ++Q KKP +E + PP
Sbjct: 255 SVSLAATDGRVIGGGVAGLLVAASPVQVVVGSFLPSYQLDQNATKKPVIEIT-TVPPPPP 313
Query: 310 AV--PISS----TDTHSSEQGQHSS 328
A+ ISS D++S GQH S
Sbjct: 314 AIGFTISSGDPMEDSYSGSHGQHRS 338
>Os08g0512400 HMG-I and HMG-Y, DNA-binding domain containing protein
Length = 292
Score = 166 bits (419), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 104/224 (46%), Positives = 134/224 (59%), Gaps = 34/224 (15%)
Query: 79 YGPDGSLIRPLNATPISA-SVPMAASAVGPYTP------ASAVGAAMKRG---RGRPLDF 128
YGPDGS+ L +P +A S P+A GP++P AS + + G RGRP
Sbjct: 29 YGPDGSMSLGLVTSPTAAASTPVAQGVPGPFSPTQPKPPASFLSSGWPDGVKKRGRPKGS 88
Query: 129 ASTAKLXXXXXXXXXXXXXXFGFHFDSIGEMVACSAGANFTPHIITVAPGEDVTMKVISF 188
+ ++ D++G SAG FTPH+ITV GEDV+ K++SF
Sbjct: 89 TNKPRI-------------------DAVG-----SAGVGFTPHVITVLAGEDVSAKIMSF 124
Query: 189 SQQGPRAICILSANGVISNVTLRQPDSSGGTLTYEGRFELLSLSGSFMPTENSGTRSRSG 248
+Q G RA+C+LSANG ISNVTLRQ +SGGT+TYEGRFE+LSLSGSF+ T++ G RSR+G
Sbjct: 125 AQHGNRAVCVLSANGAISNVTLRQTATSGGTVTYEGRFEILSLSGSFLLTDHGGQRSRTG 184
Query: 249 GMSVSLASPDGRXXXXXXXXXXXXXSPVQIVVGSFLPSYQMEQK 292
G+SVSLA PDGR +PVQIVVGSF + E K
Sbjct: 185 GLSVSLAGPDGRLLGGGVAGLLIAATPVQIVVGSFNSEGKKEPK 228
>Os10g0572900 Protein of unknown function DUF296 domain containing protein
Length = 251
Score = 158 bits (399), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 85/167 (50%), Positives = 112/167 (67%), Gaps = 9/167 (5%)
Query: 152 HFDSIGEMVACSAGANFTPHIITVAPGEDVTMKVISFSQQGPRAICILSANGVISNVTLR 211
F+++G S G FTPHI+TV GEDV K+++FSQQGPR +CILSANG ISNVTLR
Sbjct: 23 QFEALG-----SWGIAFTPHILTVKAGEDVASKIMAFSQQGPRTVCILSANGAISNVTLR 77
Query: 212 QPDSSGGTLTYEGRFELLSLSGSFMPTENSGTRSRSGGMSVSLASPDGRXXXXXXXXXXX 271
QP +SGG +TYEGRFE++SLSGSF+ E+ TRSR+GG+SV+LA DGR
Sbjct: 78 QPATSGGLVTYEGRFEIISLSGSFLLAEDGDTRSRTGGLSVALAGSDGRVLGGCVAGMLM 137
Query: 272 XXSPVQIVVGSFLPSYQMEQKNKKPRVE---AAPALAQTPPAVPISS 315
+PVQ+VV SF+ + + + +VE A P +A PA P++S
Sbjct: 138 AATPVQVVVASFIAEGKKSKPVETRKVEPMSAPPQMATYVPA-PVAS 183
>Os09g0491708 HMG-I and HMG-Y, DNA-binding domain containing protein
Length = 359
Score = 157 bits (397), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 110/233 (47%), Positives = 135/233 (57%), Gaps = 42/233 (18%)
Query: 79 YGPDGSLIRPLNATPISASVPMAASAVGPYTPASAVGA-----------AMKRGRGRPLD 127
YGPDGS+ L P+S + A +A GP++PA+A + A KRGR +
Sbjct: 99 YGPDGSMS--LALVPVSTA---AVAASGPFSPAAAAKSPDAVSSAPPPGAKKRGRPK--- 150
Query: 128 FASTAKLXXXXXXXXXXXXXXFGFHFDSIGEMVACSAGANFTPHIITVAPGEDVTMKVIS 187
ST K H S G SAGA FTPH+I V GEDV+ K++S
Sbjct: 151 -GSTNKK-----------------HVPSFGIGDIGSAGAGFTPHVIFVKAGEDVSAKIMS 192
Query: 188 FSQQGPRAICILSANGVISNVTLRQPDSSGGTLTYEGRFELLSLSGSFMPTENSGTRSRS 247
FSQ G R +C+LSANG ISNVTLRQ +SGGT+TYEGRFE+LSLSGSF+ +EN G RSR+
Sbjct: 193 FSQHGTRGVCVLSANGAISNVTLRQAATSGGTVTYEGRFEILSLSGSFLLSENGGHRSRT 252
Query: 248 GGMSVSLASPDGRXXXXXXXXXXXXXSPVQIVVGSFLPSYQMEQKNKKPRVEA 300
GG+SVSLA PDGR SPVQIVVGSF + K P++ A
Sbjct: 253 GGLSVSLAGPDGRVLGGGVAGLLTAASPVQIVVGSF-----NTEGKKGPKLHA 300
>Os11g0149100 Protein of unknown function DUF296 domain containing protein
Length = 366
Score = 157 bits (396), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 79/141 (56%), Positives = 100/141 (70%), Gaps = 2/141 (1%)
Query: 155 SIGEMVACSAGANFTPHIITVAPGEDVTMKVISFSQQGPRAICILSANGVISNVTLRQPD 214
++GE A SAG +FTPH+I V GEDV +++SFSQ+GPR+ICILSANG ISNV L QP
Sbjct: 124 TLGEWYALSAGGSFTPHVIIVGTGEDVAGRIMSFSQKGPRSICILSANGTISNVALSQPG 183
Query: 215 SSGGTLTYEGRFELLSLSGSFMPTENSGTRSRSGGMSVSLASPDGRXXXXXXXXXXXXXS 274
SSG T TYEGRFE+L L+GSF E G R R+GG+SVSLA PDGR S
Sbjct: 184 SSGSTFTYEGRFEILQLTGSFTMAEEGG-RRRTGGLSVSLAGPDGRVVGGVVAGMLRAAS 242
Query: 275 PVQIVVGSFLPSYQMEQKNKK 295
P+Q++VGSFLP+ ++Q ++
Sbjct: 243 PIQVIVGSFLPN-SLKQHQRR 262
>Os12g0147000 Protein of unknown function DUF296 domain containing protein
Length = 387
Score = 152 bits (384), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 76/141 (53%), Positives = 100/141 (70%), Gaps = 2/141 (1%)
Query: 155 SIGEMVACSAGANFTPHIITVAPGEDVTMKVISFSQQGPRAICILSANGVISNVTLRQPD 214
++GE A SAG +FTPH+I VA GEDV +++SFSQ+GPR++CIL+ANG ISNV L QP
Sbjct: 135 NLGEWYALSAGGSFTPHVIIVATGEDVAARIMSFSQKGPRSVCILAANGTISNVVLNQPG 194
Query: 215 SSGGTLTYEGRFELLSLSGSFMPTENSGTRSRSGGMSVSLASPDGRXXXXXXXXXXXXXS 274
SSG T +YEG FE+L L+GSF E G R R+GG+SVSLA PDGR S
Sbjct: 195 SSGSTFSYEGCFEILQLTGSFTIAEE-GVRRRTGGLSVSLAGPDGRVVGGVVAGMLRAAS 253
Query: 275 PVQIVVGSFLPSYQMEQKNKK 295
P+Q++VGSFLP+ ++Q ++
Sbjct: 254 PIQVIVGSFLPN-NLKQHQRR 273
>Os04g0589900 HMG-I and HMG-Y, DNA-binding domain containing protein
Length = 379
Score = 150 bits (380), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 78/157 (49%), Positives = 103/157 (65%), Gaps = 8/157 (5%)
Query: 152 HFDSIGEMVACSAGANFTPHIITVAPGEDVTMKVISFSQQGPRAICILSANGVISNVTLR 211
D++G S+G +FTPHIITV P EDV K+++FSQQGPR CI+SANG + TLR
Sbjct: 159 QLDALG-----SSGTSFTPHIITVKPNEDVASKIMAFSQQGPRTTCIISANGALCTATLR 213
Query: 212 QPDSSGGTLTYEGRFELLSLSGSFMPTENSGTRSRSGGMSVSLASPDGRXXXXXXXXXXX 271
QP +SGG +TYEG F++LSLSGSF+ E+ TRSR+GG+SV+LA DGR
Sbjct: 214 QPATSGGIVTYEGHFDILSLSGSFLLAEDGDTRSRTGGLSVALAGSDGRIVGGCVAGMLM 273
Query: 272 XXSPVQIVVGSFLPSYQMEQKNKKPRVEAAPALAQTP 308
+PVQ+VVGSF+ +K K+ ++ P A TP
Sbjct: 274 AATPVQVVVGSFIAE---GKKGKEEHLKREPTSAPTP 307
>Os02g0824300 HMG-I and HMG-Y, DNA-binding domain containing protein
Length = 394
Score = 149 bits (377), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 76/176 (43%), Positives = 102/176 (57%), Gaps = 21/176 (11%)
Query: 119 KRGRGRPLDFASTAKLXXXXXXXXXXXXXXFGFHFDSIGEMVACSAGANFTPHIITVAPG 178
KRGRGRP +L S+G+ S G FTPH+I ++PG
Sbjct: 180 KRGRGRPPGSGKMQQLA-------------------SLGKWFLGSVGTGFTPHVIIISPG 220
Query: 179 EDVTMKVISFSQQGPRAICILSANGVISNVTLRQPDSSGGTLTYEGRFELLSLSGSFMPT 238
EDV +++SFSQQGPRA+CI+SA G +S TL Q +SGG +TYEGRFE+L LSGS++
Sbjct: 221 EDVAARIMSFSQQGPRAVCIISATGAVSTATLHQDSNSGGVVTYEGRFEILCLSGSYLVI 280
Query: 239 ENSGTRSRSGGMSVSLASPDGRXXXXXXXXXXXXXSPVQIVVGSFLPSYQMEQKNK 294
E G+R+RSGG+ ++L PD R VQ++VGSF+ Y +KNK
Sbjct: 281 EEGGSRTRSGGLCIALCGPDHRVIGGSVGGVLTAAGTVQVIVGSFM--YGGTKKNK 334
>Os06g0326000 HMG-I and HMG-Y, DNA-binding domain containing protein
Length = 378
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 65/130 (50%), Positives = 86/130 (66%), Gaps = 2/130 (1%)
Query: 168 FTPHIITVAPGEDVTMKVISFSQQGPRAICILSANGVISNVTLRQPDSSGGT-LTYEGRF 226
P +ITV GEDV +V+SF++ G A+C+LSANG +SN+TLRQ SSG T + YEG F
Sbjct: 200 LKPSVITVQVGEDVVSRVMSFTKNG-WAVCVLSANGAVSNMTLRQAGSSGATTVNYEGHF 258
Query: 227 ELLSLSGSFMPTENSGTRSRSGGMSVSLASPDGRXXXXXXXXXXXXXSPVQIVVGSFLPS 286
E+LSLSGS++ +E+ G SR+GG+SVSLA PDGR +PVQ+V+GSFL
Sbjct: 259 EILSLSGSYLLSESVGLSSRAGGLSVSLAGPDGRVLGGGVAGPLNAATPVQVVIGSFLAD 318
Query: 287 YQMEQKNKKP 296
+ K P
Sbjct: 319 VKKGHKQAMP 328
>Os04g0683900 HMG-I and HMG-Y, DNA-binding domain containing protein
Length = 419
Score = 92.8 bits (229), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 57/158 (36%), Positives = 83/158 (52%), Gaps = 25/158 (15%)
Query: 157 GEMVACSAGANFTPHIITVAPGEDVTMKVISFSQQGPRAICILSANGVISNVTLRQPDSS 216
G + SAG +FTPHIIT +P EDV K+++F+ RA+C+LSA G +S V LR P +
Sbjct: 207 GNAFSGSAGTSFTPHIITASPSEDVAGKIVAFANHSSRAVCVLSATGSVSRVVLRHP--A 264
Query: 217 GGTLT-------------YEGRFELLSLSGSFMPTENSGTRSRSGGMSVSLASPDGRXXX 263
G ++ YEG +E+LS+SG + N +S G+SV+L SP+
Sbjct: 265 DGAMSRVHASSHYKNPAIYEGLYEILSMSGCY----NLMNEGQSDGLSVTLCSPERHIIG 320
Query: 264 XXXXXXXXXXSPVQIVVGSFLPSYQMEQKNKKPRVEAA 301
S VQ+V+GSF+ Q KP+ + A
Sbjct: 321 GVLGGALVAASTVQVVLGSFV------QGGSKPKSKKA 352
>Os02g0448000 Protein of unknown function DUF296 domain containing protein
Length = 316
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 32/67 (47%), Positives = 48/67 (71%)
Query: 171 HIITVAPGEDVTMKVISFSQQGPRAICILSANGVISNVTLRQPDSSGGTLTYEGRFELLS 230
H++ VA G D++ + +F+++ R +C+LS G ++NVTLRQP S G + GRFE+LS
Sbjct: 127 HVMEVAGGCDISESITTFARRRQRGVCVLSGAGTVTNVTLRQPASQGAVVALHGRFEILS 186
Query: 231 LSGSFMP 237
LSGSF+P
Sbjct: 187 LSGSFLP 193
>Os02g0820800 HMG-I and HMG-Y, DNA-binding domain containing protein
Length = 266
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 30/67 (44%), Positives = 45/67 (67%)
Query: 171 HIITVAPGEDVTMKVISFSQQGPRAICILSANGVISNVTLRQPDSSGGTLTYEGRFELLS 230
H++ VA G DV + FS++ R +C+LS G ++NV LRQP + G + GRFE+LS
Sbjct: 88 HVMEVAGGADVADAIAQFSRRRQRGVCVLSGAGTVANVALRQPSAPGAVVALHGRFEILS 147
Query: 231 LSGSFMP 237
L+G+F+P
Sbjct: 148 LTGTFLP 154
>Os04g0590200 Protein of unknown function DUF296 domain containing protein
Length = 305
Score = 72.0 bits (175), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 33/68 (48%), Positives = 50/68 (73%), Gaps = 1/68 (1%)
Query: 171 HIITVAPGEDVTMKVISFSQQGPRAICILSANGVISNVTLRQPDS-SGGTLTYEGRFELL 229
HI+ V G DV V +++++ R +C+LS +GV++NVTLRQP + +G ++ GRFE+L
Sbjct: 112 HILEVGSGCDVFECVSTYARRRQRGVCVLSGSGVVTNVTLRQPSAPAGAVVSLHGRFEIL 171
Query: 230 SLSGSFMP 237
SLSGSF+P
Sbjct: 172 SLSGSFLP 179
>Os08g0159700 Protein of unknown function DUF296 domain containing protein
Length = 289
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 34/73 (46%), Positives = 48/73 (65%), Gaps = 6/73 (8%)
Query: 171 HIITVAPGEDVTMKVISFSQQGPRAICILSANGVISNVTLRQPDS------SGGTLTYEG 224
HI+ VA G DV + +++++ R +C+LSA G ++NVTLRQP S S T G
Sbjct: 93 HILEVAAGCDVFEALTAYARRRQRGVCVLSAAGTVANVTLRQPQSAQPGPASPAVATLHG 152
Query: 225 RFELLSLSGSFMP 237
RFE+LSL+GSF+P
Sbjct: 153 RFEILSLAGSFLP 165
>Os08g0563200 Protein of unknown function DUF296 domain containing protein
Length = 235
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 72/158 (45%), Gaps = 3/158 (1%)
Query: 171 HIITVAPGEDVTMKVISFSQQGPRAICILSANGVISNVTLRQPDSSGGTLTYEGRFELLS 230
H++ VA G DV + F+++ R +C+LS G +++V LRQP + + GRFE+LS
Sbjct: 65 HVMEVAGGADVAESIAHFARRRQRGVCVLSGAGTVTDVALRQPAAPSAVVALRGRFEILS 124
Query: 231 LSGSFMPTENSGTRSRSGGMSVSLASPDGRXXXXXXXXXXXXXSPVQIVVGSFLPSYQME 290
L+G+F+P S G++V LA G+ PV ++ +F +
Sbjct: 125 LTGTFLPGPAP---PGSTGLTVYLAGGQGQVVGGSVVGTLTAAGPVMVIASTFANATYER 181
Query: 291 QKNKKPRVEAAPALAQTPPAVPISSTDTHSSEQGQHSS 328
+ EAA PP + + D G H +
Sbjct: 182 LPLDQEEEEAAAGGMMAPPPLMAGAADPLLFGGGMHDA 219
>Os03g0270000 Protein of unknown function DUF296 domain containing protein
Length = 258
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 46/68 (67%), Gaps = 1/68 (1%)
Query: 171 HIITVAPGEDVTMKVISFSQQGPRAICILSANGVISNVTLRQPDSSG-GTLTYEGRFELL 229
H++ +A G D+ + FS++ R + +LS +G ++NVTLRQP +G + GRFE+L
Sbjct: 75 HVLEIASGADIVEAIAGFSRRRQRGVSVLSGSGAVTNVTLRQPAGTGAAAVALRGRFEIL 134
Query: 230 SLSGSFMP 237
S+SG+F+P
Sbjct: 135 SMSGAFLP 142
>Os09g0464300
Length = 334
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 56/104 (53%), Gaps = 9/104 (8%)
Query: 166 ANFTPHIITVAPGEDVTMKVISFSQQGPRAICILSANGVISNVTLRQPD-----SSGGTL 220
A PH+I + G DV + FS + IC+L+ G ++NV+LR P S+ +
Sbjct: 109 AAMRPHVIEIPGGRDVAEALARFSSRRNLGICVLAGTGAVANVSLRHPSPGVPGSAPAAI 168
Query: 221 TYEGRFELLSLSGSFMP----TENSGTRSRSGGMSVSLASPDGR 260
+ GR+E+LSLS +F+P + + G+S+SLA P G+
Sbjct: 169 VFHGRYEILSLSATFLPPAMSSVAPQAAVAAAGLSISLAGPHGQ 212
>Os06g0136900 Protein of unknown function DUF296 domain containing protein
Length = 328
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 47/68 (69%), Gaps = 1/68 (1%)
Query: 171 HIITVAPGEDVTMKVISFSQQGPRAICILSANGVISNVTLRQPDSS-GGTLTYEGRFELL 229
H++ VA G D+ V +F+++ +C+LSA G ++NV++RQP + G + GRF++L
Sbjct: 141 HVLEVASGCDLVDSVATFARRRQVGVCVLSATGAVTNVSVRQPGAGPGAVVNLTGRFDIL 200
Query: 230 SLSGSFMP 237
SLSGSF+P
Sbjct: 201 SLSGSFLP 208
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.311 0.126 0.358
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 10,307,268
Number of extensions: 396744
Number of successful extensions: 1552
Number of sequences better than 1.0e-10: 21
Number of HSP's gapped: 1536
Number of HSP's successfully gapped: 21
Length of query: 372
Length of database: 17,035,801
Length adjustment: 102
Effective length of query: 270
Effective length of database: 11,709,973
Effective search space: 3161692710
Effective search space used: 3161692710
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 157 (65.1 bits)