Os12g0147000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF296 domain containing protein.
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Os12g0147000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein of unknown function DUF296 domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = atmosphere,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 73.55 | 0.403 | 3.23 | -2.41 | 0.0709 | 19.8 | 0.125 | -115 | 0.00246 | 10.5 | 995.4 | 1307 | -- | -- |
| 75.32 | 0.407 | 2.85 | -0.102 | 0.0558 | 0.508 | 0.0903 | -- | 0.00156 | 11.4 | 996.3 | 1046 | -- | -- |
| 73.62 | 0.4 | 3.23 | -2.41 | 0.07 | 19.8 | -- | -115 | 0.00248 | 10.5 | 995.4 | 1296 | -- | -- |
| 72.92 | 0.398 | 2.87 | -0.165 | 0.0619 | 1.4 | -- | -- | -0.0332 | 11.1 | 995.4 | 392 | -- | -- |
| 73.88 | 0.4 | 3.22 | -2.31 | -- | 19.8 | -- | -115 | 0.00205 | -- | 995.5 | 1230 | -- | -- |
| 77.07 | 0.412 | 2.85 | -0.0825 | 0.0475 | -- | 0.0735 | -- | -0.00612 | 12.2 | -- | -- | -- | -- |
| 77.09 | 0.411 | 2.85 | -0.0797 | 0.0473 | -- | -- | -- | -0.00584 | 12 | -- | -- | -- | -- |
| 72.87 | 0.398 | 2.85 | -0.105 | -- | 1.39 | -- | -- | 0.00366 | -- | 995.5 | 392 | -- | -- |
| 72.86 | 0.398 | 2.84 | -- | 0.067 | 1.39 | -- | -- | 0.0141 | 10.4 | 995.4 | 392 | -- | -- |
| 77.23 | 0.411 | 2.85 | -0.0811 | -- | -- | -- | -- | -0.00649 | -- | -- | -- | -- | -- |
| 77.26 | 0.411 | 2.85 | -- | 0.0484 | -- | -- | -- | 0.00303 | 12.1 | -- | -- | -- | -- |
| 73.16 | 0.398 | 2.84 | -- | -- | 1.37 | -- | -- | 0.0152 | -- | 995.5 | 392 | -- | -- |
| 77.41 | 0.411 | 2.85 | -- | -- | -- | -- | -- | 0.00251 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 65.13 | wind | 7 | 10 | > th | dose independent | rect. | 19 | 1 |
| 3 | 65.13 | wind | 7 | 10 | > th | dose dependent | rect. | 19 | 1 |
| 56 | 67.63 | wind | 7 | 270 | > th | dose dependent | rect. | 16 | 1 |
| 57 | 67.65 | atmosphere | 1000 | 90 | < th | dose independent | rect. | 18 | 1 |
| 61 | 67.65 | atmosphere | 1000 | 90 | < th | dose dependent | rect. | 18 | 1 |
| 102 | 68.41 | wind | 9 | 270 | > th | dose independent | rect. | 16 | 1 |
| 105 | 68.47 | wind | 7 | 270 | > th | dose dependent | rect. | 16 | 4 |
| 127 | 69.10 | wind | 7 | 270 | > th | dose independent | rect. | 16 | 4 |
| 130 | 69.20 | humidity | 70 | 90 | < th | dose independent | rect. | 18 | 1 |
| 205 | 70.52 | wind | 5 | 30 | > th | dose dependent | rect. | 19 | 5 |
| 233 | 70.72 | atmosphere | 1000 | 90 | < th | dose dependent | rect. | 18 | 5 |
| 309 | 71.43 | humidity | 70 | 90 | < th | dose dependent | rect. | 18 | 1 |
| 374 | 71.80 | wind | 7 | 10 | > th | dose dependent | rect. | 19 | 15 |
| 421 | 72.03 | atmosphere | 995 | 270 | > th | dose independent | sin | 9 | NA |
| 496 | 72.37 | temperature | 30 | 270 | > th | dose dependent | rect. | 16 | 1 |
| 506 | 72.39 | humidity | 80 | 10 | < th | dose independent | rect. | 20 | 1 |
| 533 | 72.40 | temperature | 30 | 270 | > th | dose dependent | rect. | 16 | 3 |
| 559 | 72.45 | atmosphere | 995 | 270 | < th | dose independent | sin | 9 | NA |
| 577 | 72.55 | wind | 7 | 30 | > th | dose independent | sin | 11 | NA |
| 639 | 72.66 | temperature | 30 | 270 | > th | dose independent | rect. | 17 | 2 |
| 679 | 72.68 | temperature | 30 | 30 | < th | dose independent | rect. | 5 | 23 |
| 688 | 72.71 | atmosphere | 995 | 270 | < th | dose dependent | sin | 9 | NA |
| 697 | 72.73 | wind | 9 | 270 | > th | dose independent | sin | 13 | NA |
| 820 | 72.77 | radiation | 10 | 270 | > th | dose dependent | rect. | 17 | 1 |
| 876 | 72.81 | temperature | 30 | 90 | > th | dose independent | rect. | 11 | 2 |
| 958 | 72.92 | temperature | 30 | 10 | > th | dose dependent | rect. | 11 | 2 |
| 979 | 72.93 | radiation | 10 | 270 | > th | dose independent | rect. | 17 | 1 |