Os08g0159700
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF296 domain containing protein.
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Os08g0159700 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein of unknown function DUF296 domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 318.36 | 0.838 | 3.39 | 0.0796 | 0.3 | 3.09 | -0.047 | 7.41 | -0.217 | 12.9 | 20 | 4836 | -- | -- |
| 338.44 | 0.863 | 3.22 | 0.000692 | 0.317 | 0.0621 | 0.00197 | -- | -0.262 | 12.8 | 14.49 | 1880 | -- | -- |
| 318.34 | 0.831 | 3.39 | 0.0913 | 0.291 | 3.2 | -- | 7.61 | -0.215 | 12.9 | 19.87 | 4829 | -- | -- |
| 332.05 | 0.849 | 3.2 | 0.194 | 0.324 | 0.61 | -- | -- | -0.15 | 13.4 | 35.86 | 1817 | -- | -- |
| 322.31 | 0.836 | 3.45 | 0.214 | -- | 5.63 | -- | 12.6 | -0.257 | -- | 17.86 | 3694 | -- | -- |
| 338.45 | 0.862 | 3.22 | -0.00195 | 0.316 | -- | 0.00935 | -- | -0.262 | 12.8 | -- | -- | -- | -- |
| 338.45 | 0.862 | 3.22 | -0.0016 | 0.316 | -- | -- | -- | -0.262 | 12.8 | -- | -- | -- | -- |
| 336.11 | 0.854 | 3.2 | 0.23 | -- | 0.639 | -- | -- | -0.138 | -- | 35.01 | 2545 | -- | -- |
| 332.92 | 0.85 | 3.21 | -- | 0.307 | 0.534 | -- | -- | -0.182 | 13.1 | 48.26 | 1800 | -- | -- |
| 344.69 | 0.868 | 3.23 | -0.0131 | -- | -- | -- | -- | -0.268 | -- | -- | -- | -- | -- |
| 338.45 | 0.861 | 3.22 | -- | 0.316 | -- | -- | -- | -0.262 | 12.8 | -- | -- | -- | -- |
| 336.76 | 0.855 | 3.21 | -- | -- | 0.649 | -- | -- | -0.177 | -- | 51.25 | 1064 | -- | -- |
| 344.69 | 0.867 | 3.23 | -- | -- | -- | -- | -- | -0.267 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 306.79 | atmosphere | 1010 | 43200 | > th | dose dependent | rect. | 10 | 1 |
| 2 | 306.82 | atmosphere | 1000 | 43200 | > th | dose dependent | rect. | 6 | 1 |
| 5 | 306.93 | atmosphere | 1000 | 43200 | > th | dose dependent | rect. | 10 | 1 |
| 7 | 307.06 | atmosphere | 1000 | 43200 | > th | dose dependent | rect. | 2 | 1 |
| 10 | 307.08 | atmosphere | 1000 | 43200 | > th | dose dependent | rect. | 2 | 5 |
| 19 | 307.12 | atmosphere | 1000 | 43200 | > th | dose dependent | rect. | 2 | 9 |
| 32 | 307.17 | atmosphere | 1000 | 43200 | > th | dose dependent | rect. | 6 | 5 |
| 72 | 307.25 | wind | 3 | 43200 | < th | dose independent | rect. | 17 | 1 |
| 90 | 307.29 | atmosphere | 1000 | 43200 | > th | dose dependent | sin | 6 | NA |
| 168 | 307.44 | atmosphere | 1010 | 43200 | > th | dose independent | rect. | 18 | 1 |
| 223 | 307.51 | radiation | 20 | 43200 | > th | dose independent | rect. | 16 | 15 |
| 259 | 307.55 | atmosphere | 1010 | 43200 | > th | dose dependent | rect. | 6 | 1 |
| 295 | 307.59 | atmosphere | 1010 | 43200 | > th | dose dependent | sin | 4 | NA |
| 331 | 307.62 | atmosphere | 1010 | 43200 | < th | dose independent | rect. | 18 | 1 |
| 333 | 307.62 | atmosphere | 1010 | 43200 | > th | dose dependent | rect. | 2 | 1 |
| 359 | 307.64 | atmosphere | 1000 | 43200 | > th | dose dependent | no | NA | NA |
| 360 | 307.64 | atmosphere | 1000 | 43200 | > th | dose dependent | rect. | 22 | 1 |
| 362 | 307.64 | atmosphere | 1010 | 43200 | > th | dose dependent | rect. | 2 | 5 |
| 371 | 307.64 | atmosphere | 1000 | 43200 | > th | dose dependent | rect. | 2 | 23 |
| 407 | 307.66 | atmosphere | 1000 | 43200 | > th | dose dependent | rect. | 5 | 23 |
| 409 | 307.66 | atmosphere | 1000 | 43200 | > th | dose dependent | rect. | 9 | 23 |
| 506 | 307.73 | wind | 3 | 43200 | > th | dose independent | rect. | 17 | 1 |
| 691 | 307.87 | atmosphere | 1010 | 43200 | > th | dose dependent | no | NA | NA |
| 710 | 307.88 | atmosphere | 1010 | 43200 | > th | dose dependent | rect. | 5 | 23 |
| 712 | 307.88 | atmosphere | 1010 | 43200 | > th | dose dependent | rect. | 8 | 23 |
| 815 | 307.97 | atmosphere | 1015 | 43200 | < th | dose dependent | rect. | 3 | 1 |
| 926 | 308.08 | radiation | 30 | 43200 | > th | dose independent | rect. | 15 | 17 |
| 996 | 308.16 | atmosphere | 1015 | 43200 | < th | dose dependent | rect. | 6 | 1 |