Os03g0270000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Protein of unknown function DUF296 domain containing protein.
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Os03g0270000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Protein of unknown function DUF296 domain containing protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = radiation,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 316.72 | 0.836 | 6.1 | 0.456 | 2 | 3.81 | -1.75 | 4.59 | 0.796 | 4.53 | 1.09 | 1550 | -- | -- |
| 329.14 | 0.845 | 6.11 | 0.896 | 1.79 | 3.75 | -1.05 | -- | 0.793 | 4.95 | 1.269 | 1597 | -- | -- |
| 324.2 | 0.839 | 6.12 | 0.519 | 1.79 | 4 | -- | 4.16 | 0.789 | 4.82 | 1.1 | 1572 | -- | -- |
| 327.29 | 0.843 | 6.08 | 0.976 | 1.73 | 3.73 | -- | -- | 0.886 | 4.96 | 1.488 | 1597 | -- | -- |
| 356.95 | 0.88 | 6.07 | 0.466 | -- | 4.55 | -- | 3.99 | 0.943 | -- | 1.96 | 1895 | -- | -- |
| 443.13 | 0.987 | 6.15 | 0.386 | 2.6 | -- | -0.826 | -- | 0.497 | 3.39 | -- | -- | -- | -- |
| 445.26 | 0.988 | 6.15 | 0.401 | 2.59 | -- | -- | -- | 0.502 | 3.37 | -- | -- | -- | -- |
| 337.56 | 0.856 | 6.05 | 0.782 | -- | 4.6 | -- | -- | 1.01 | -- | 1.98 | 1896 | -- | -- |
| 338.74 | 0.857 | 6.08 | -- | 1.86 | 3.35 | -- | -- | 0.8 | 4.6 | 1.7 | 1599 | -- | -- |
| 824.37 | 1.34 | 6.15 | 0.511 | -- | -- | -- | -- | 0.571 | -- | -- | -- | -- | -- |
| 449.51 | 0.992 | 6.16 | -- | 2.6 | -- | -- | -- | 0.457 | 3.36 | -- | -- | -- | -- |
| 353.12 | 0.875 | 6.06 | -- | -- | 4.52 | -- | -- | 0.945 | -- | 2.08 | 1903 | -- | -- |
| 831.27 | 1.35 | 6.16 | -- | -- | -- | -- | -- | 0.514 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 292.40 | humidity | 80.0 | 43200 | > th | dose independent | rect. | 13 | 3 |
| 2 | 292.44 | humidity | 80.0 | 43200 | > th | dose independent | rect. | 13 | 1 |
| 5 | 293.60 | humidity | 80.0 | 43200 | > th | dose dependent | rect. | 13 | 4 |
| 7 | 293.80 | humidity | 80.0 | 43200 | > th | dose dependent | rect. | 16 | 1 |
| 19 | 296.07 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 13 | 1 |
| 20 | 296.22 | humidity | 80.0 | 43200 | < th | dose independent | rect. | 13 | 3 |
| 32 | 297.54 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 13 | 1 |
| 33 | 297.54 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 13 | 1 |
| 34 | 297.56 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 13 | 1 |
| 38 | 298.15 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 13 | 4 |
| 43 | 298.95 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 13 | 4 |
| 45 | 299.11 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 13 | 4 |
| 46 | 299.11 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 13 | 4 |
| 79 | 301.91 | humidity | 80.0 | 43200 | < th | dose independent | rect. | 9 | 7 |
| 139 | 305.21 | humidity | 90.0 | 43200 | < th | dose independent | rect. | 13 | 7 |
| 171 | 306.76 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 19 | 1 |
| 172 | 306.76 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 19 | 1 |
| 177 | 306.95 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 19 | 1 |
| 183 | 307.14 | humidity | 90.0 | 43200 | > th | dose independent | rect. | 13 | 8 |
| 250 | 309.54 | humidity | 90.0 | 43200 | > th | dose dependent | rect. | 20 | 1 |
| 262 | 309.85 | humidity | 90.0 | 43200 | > th | dose independent | rect. | 9 | 12 |
| 271 | 310.09 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 6 | 14 |
| 272 | 310.09 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 6 | 14 |
| 283 | 310.26 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 6 | 14 |
| 316 | 310.58 | temperature | 25.0 | 14400 | > th | dose dependent | rect. | 23 | 2 |
| 334 | 310.93 | temperature | 30.0 | 14400 | < th | dose independent | rect. | 12 | 1 |
| 342 | 311.08 | radiation | 10.0 | 14400 | < th | dose dependent | rect. | 13 | 2 |
| 347 | 311.19 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 9 | 11 |
| 348 | 311.19 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 9 | 11 |
| 350 | 311.31 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 9 | 11 |
| 352 | 311.33 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 19 | 1 |
| 362 | 311.50 | humidity | 80.0 | 43200 | > th | dose dependent | rect. | 9 | 1 |
| 368 | 311.54 | humidity | 70.0 | 43200 | > th | dose dependent | rect. | 9 | 16 |
| 374 | 311.66 | temperature | 30.0 | 14400 | > th | dose independent | rect. | 12 | 1 |
| 386 | 311.84 | humidity | 90.0 | 43200 | < th | dose dependent | rect. | 14 | 1 |
| 393 | 311.94 | precipitation | 0.1 | 43200 | > th | dose independent | rect. | 12 | 8 |
| 402 | 312.00 | precipitation | 0.1 | 43200 | < th | dose independent | rect. | 12 | 8 |
| 403 | 312.00 | precipitation | 0.1 | 43200 | < th | dose dependent | rect. | 12 | 8 |
| 404 | 312.00 | humidity | 70.0 | 43200 | > th | dose dependent | rect. | 13 | 11 |
| 408 | 312.06 | humidity | 80.0 | 43200 | > th | dose independent | sin | 1 | NA |
| 419 | 312.13 | humidity | 70.0 | 43200 | > th | dose dependent | sin | 19 | NA |
| 445 | 312.47 | temperature | 25.0 | 43200 | < th | dose independent | rect. | 16 | 1 |
| 457 | 312.57 | temperature | 30.0 | 43200 | < th | dose dependent | rect. | 14 | 1 |
| 466 | 312.70 | humidity | 80.0 | 43200 | > th | dose dependent | sin | 22 | NA |
| 483 | 312.85 | humidity | 80.0 | 43200 | > th | dose independent | rect. | 9 | 16 |
| 500 | 312.96 | temperature | 25.0 | 43200 | > th | dose independent | rect. | 16 | 1 |
| 554 | 313.52 | temperature | 15.0 | 43200 | > th | dose dependent | rect. | 14 | 1 |
| 565 | 313.60 | precipitation | 0.1 | 43200 | < th | dose independent | sin | 23 | NA |
| 566 | 313.60 | precipitation | 0.1 | 43200 | < th | dose dependent | sin | 23 | NA |
| 578 | 313.68 | precipitation | 0.1 | 43200 | > th | dose independent | sin | 23 | NA |
| 589 | 313.74 | humidity | 80.0 | 43200 | < th | dose independent | rect. | 9 | 16 |
| 619 | 313.95 | radiation | 30.0 | 14400 | > th | dose dependent | rect. | 14 | 1 |
| 642 | 314.09 | humidity | 80.0 | 43200 | < th | dose independent | sin | 0 | NA |
| 685 | 314.35 | wind | 9.0 | 43200 | > th | dose dependent | rect. | 18 | 1 |
| 691 | 314.39 | humidity | 80.0 | 43200 | < th | dose independent | rect. | 10 | 1 |
| 725 | 314.62 | humidity | 90.0 | 43200 | < th | dose independent | sin | 21 | NA |
| 737 | 314.68 | humidity | 80.0 | 43200 | > th | dose independent | rect. | 10 | 1 |
| 800 | 315.04 | humidity | 90.0 | 43200 | < th | dose independent | rect. | 19 | 1 |
| 904 | 315.50 | radiation | 20.0 | 14400 | > th | dose independent | rect. | 16 | 17 |
| 968 | 315.74 | precipitation | 0.1 | 43200 | > th | dose dependent | rect. | 3 | 14 |