BLASTP 2.2.23 [Feb-03-2010]
Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment:
Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala,
Aleksandr Morgulis, Alejandro A. Schäffer, and Yi-Kuo Yu (2005) "Protein database
searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= Os07g0649600 Os07g0649600|Os07g0649600
(178 letters)
Database: rap3
52,214 sequences; 17,035,801 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Os07g0649600 Conserved hypothetical protein 367 e-102
Os07g0646300 Conserved hypothetical protein 248 1e-66
Os07g0646600 Conserved hypothetical protein 246 8e-66
Os07g0645800 Protein of unknown function DUF1677, Oryza sat... 185 1e-47
Os04g0454600 Conserved hypothetical protein 169 1e-42
Os09g0246700 Conserved hypothetical protein 150 4e-37
Os10g0327800 Conserved hypothetical protein 136 1e-32
Os08g0499400 Conserved hypothetical protein 126 7e-30
Os04g0452300 125 1e-29
Os11g0130600 Conserved hypothetical protein 124 4e-29
Os12g0127500 Conserved hypothetical protein 110 5e-25
Os12g0228300 Conserved hypothetical protein 106 1e-23
Os03g0107500 Conserved hypothetical protein 105 1e-23
Os11g0130700 104 3e-23
Os12g0107800 99 2e-21
Os11g0107800 94 6e-20
Os09g0442000 92 2e-19
Os12g0211100 Conserved hypothetical protein 92 2e-19
Os12g0211000 Conserved hypothetical protein 90 1e-18
Os08g0496700 81 4e-16
Os08g0496650 73 9e-14
>Os07g0649600 Conserved hypothetical protein
Length = 178
Score = 367 bits (942), Expect = e-102, Method: Compositional matrix adjust.
Identities = 178/178 (100%), Positives = 178/178 (100%)
Query: 1 MAGPKRGIDMMDYALIEYDMRIKIGEQEKCDVQLIDGASLIGPAGLWNDSYTFRIPGDYG 60
MAGPKRGIDMMDYALIEYDMRIKIGEQEKCDVQLIDGASLIGPAGLWNDSYTFRIPGDYG
Sbjct: 1 MAGPKRGIDMMDYALIEYDMRIKIGEQEKCDVQLIDGASLIGPAGLWNDSYTFRIPGDYG 60
Query: 61 AVDITLSRLRWAAEATVEVVISEVQTSFDLLLGCITSGLDKEIRLFDGTITEPRGLKRSV 120
AVDITLSRLRWAAEATVEVVISEVQTSFDLLLGCITSGLDKEIRLFDGTITEPRGLKRSV
Sbjct: 61 AVDITLSRLRWAAEATVEVVISEVQTSFDLLLGCITSGLDKEIRLFDGTITEPRGLKRSV 120
Query: 121 VAVRMRSLIELNFKVGALSSSLDHCCSFKPKYHGHDTRELKTAFALISVKVCLFDHAF 178
VAVRMRSLIELNFKVGALSSSLDHCCSFKPKYHGHDTRELKTAFALISVKVCLFDHAF
Sbjct: 121 VAVRMRSLIELNFKVGALSSSLDHCCSFKPKYHGHDTRELKTAFALISVKVCLFDHAF 178
>Os07g0646300 Conserved hypothetical protein
Length = 469
Score = 248 bits (634), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 127/172 (73%), Positives = 140/172 (81%), Gaps = 1/172 (0%)
Query: 1 MAGPKRGIDMMDYALIEYDMRIKIGEQEKCDVQLIDGASLIGPAGLWNDSYTFRIPGDYG 60
M GP RGIDMMDYALIEYDMRIK GEQEK D+QLIDGAS+IGP GLWN T IPGDYG
Sbjct: 288 MEGPNRGIDMMDYALIEYDMRIKTGEQEKDDLQLIDGASMIGPGGLWNRPETICIPGDYG 347
Query: 61 AVDITLSRLRWAAEATVEVVISEVQTSFDLLLGCITSGLDKEIRLFDGTITEPRGLKRSV 120
AVDITLSR +AEATVE++ISEVQ+SF+LLLGC+TS LDKEIRLFDG I+E R LKRSV
Sbjct: 348 AVDITLSRFNCSAEATVEILISEVQSSFNLLLGCLTSDLDKEIRLFDGVISESRDLKRSV 407
Query: 121 VAVRMRSLIELNFKVGALSSSLD-HCCSFKPKYHGHDTRELKTAFALISVKV 171
VAV S I+L FKVGA SS D H SFK K HG+DT+E+KT FALISV V
Sbjct: 408 VAVMRDSFIDLKFKVGAFPSSFDQHYVSFKEKIHGYDTQEIKTDFALISVNV 459
>Os07g0646600 Conserved hypothetical protein
Length = 474
Score = 246 bits (627), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 126/172 (73%), Positives = 140/172 (81%), Gaps = 1/172 (0%)
Query: 1 MAGPKRGIDMMDYALIEYDMRIKIGEQEKCDVQLIDGASLIGPAGLWNDSYTFRIPGDYG 60
M GP RGIDMMDYALIEYDMRIK GEQEK D+QLIDGAS+IG GLWN T IPGDYG
Sbjct: 288 MEGPNRGIDMMDYALIEYDMRIKTGEQEKDDLQLIDGASMIGSGGLWNRPETICIPGDYG 347
Query: 61 AVDITLSRLRWAAEATVEVVISEVQTSFDLLLGCITSGLDKEIRLFDGTITEPRGLKRSV 120
AVDITLSR +AEATVE++ISEVQ+SF+LLLGC+TS LDKEIRLFDG I+E R LKRSV
Sbjct: 348 AVDITLSRFNCSAEATVEILISEVQSSFNLLLGCLTSDLDKEIRLFDGVISESRDLKRSV 407
Query: 121 VAVRMRSLIELNFKVGALSSSLD-HCCSFKPKYHGHDTRELKTAFALISVKV 171
VAV S I+L F+VGA SS D H SFK K HG+DT+E+KT FALISVKV
Sbjct: 408 VAVTRDSFIDLKFEVGAFPSSFDQHYVSFKEKIHGYDTQEIKTDFALISVKV 459
>Os07g0645800 Protein of unknown function DUF1677, Oryza sativa family protein
Length = 326
Score = 185 bits (470), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 92/136 (67%), Positives = 107/136 (78%), Gaps = 1/136 (0%)
Query: 38 ASLIGPAGLWNDSYTFRIPGDYGAVDITLSRLRWAAEATVEVVISEVQTSFDLLLGCITS 97
+ + P GLWN Y+ +IPGDYGAVDIT++ L A EATVEVVISEVQ+ F+LLLGC+TS
Sbjct: 181 SGITSPLGLWNQPYSIKIPGDYGAVDITVAHLNNAVEATVEVVISEVQSGFNLLLGCLTS 240
Query: 98 GLDKEIRLFDGTITEPRGLKRSVVAVRMRSLIELNFKVGALSSSLD-HCCSFKPKYHGHD 156
L+KE+RLFDG I E R LKRSVVAV +S I+L FKVGA SS D HC SFKPK HGHD
Sbjct: 241 DLNKEMRLFDGAIVESRFLKRSVVAVNWKSSIDLKFKVGASPSSFDQHCVSFKPKIHGHD 300
Query: 157 TRELKTAFALISVKVC 172
T+E+KT FALISVKV
Sbjct: 301 TQEIKTDFALISVKVT 316
>Os04g0454600 Conserved hypothetical protein
Length = 481
Score = 169 bits (428), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 97/172 (56%), Positives = 116/172 (67%), Gaps = 1/172 (0%)
Query: 1 MAGPKRGIDMMDYALIEYDMRIKIGEQEKCDVQLIDGASLIGPAGLWNDSYTFRIPGDYG 60
M GPKRGID L+EYDMRIK GE+E+ D+QLIDGA+ + + RI GD G
Sbjct: 303 MTGPKRGIDFSCAVLVEYDMRIKTGEREEDDLQLIDGATDLDHILTSHVPVRNRIYGDCG 362
Query: 61 AVDITLSRLRWAAEATVEVVISEVQTSFDLLLGCITSGLDKEIRLFDGTITEPRGLKRSV 120
AVDIT + L +A EATVEVVISEVQTSFDL L C TSGL +EIRLFDG I+E R L+R V
Sbjct: 363 AVDITQANLLYAFEATVEVVISEVQTSFDLCLSCFTSGLHEEIRLFDGAISESRDLRRYV 422
Query: 121 VAVRMRSLIELNFKVGALSSSL-DHCCSFKPKYHGHDTRELKTAFALISVKV 171
+AV ++L FKVG S +HC SFK HG + ++K FA ISVKV
Sbjct: 423 IAVMEHECMDLKFKVGLGSGCFAEHCRSFKATNHGCASEQIKIEFASISVKV 474
>Os09g0246700 Conserved hypothetical protein
Length = 321
Score = 150 bits (379), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 89/177 (50%), Positives = 117/177 (66%), Gaps = 8/177 (4%)
Query: 1 MAGPKRGIDMMDYALIEYDMRIKIGEQEKCDVQLIDGASLIGPAGLWNDSYTF--RIPGD 58
M GPKRGI M L+E+DMRIK GEQEK D+QLIDGA I GL ++ F RI GD
Sbjct: 140 MTGPKRGISMCCSVLLEFDMRIKKGEQEKDDLQLIDGA--IDYIGLITATFPFTKRINGD 197
Query: 59 YGAVDITLSRLRWAAEATVEVVISEVQTSFDLLLG--CITSGLDKEIRLFDGTITEPRGL 116
GAVDITL+R+ WA EAT++V+IS+VQ+ F+L L C S + KEI+LF+G I E GL
Sbjct: 198 CGAVDITLARVYWAVEATIQVIISDVQSGFNLYLSSLCFVSDVWKEIQLFNGPIGESCGL 257
Query: 117 KRSVVAVRMRSLIELNFKVGALSSS--LDHCCSFKPKYHGHDTRELKTAFALISVKV 171
+R VVAV + + + L KVG S+ ++ CSFK HG ++++ A IS+KV
Sbjct: 258 RRYVVAVSLDTWMHLKLKVGQKGSNHYVERYCSFKAINHGCSSQQILGELASISMKV 314
>Os10g0327800 Conserved hypothetical protein
Length = 422
Score = 136 bits (342), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 84/180 (46%), Positives = 103/180 (57%), Gaps = 14/180 (7%)
Query: 1 MAGPKRGIDMMDYALIEYDMRIKIGEQEKCDVQLIDGASLIGPAGLWND-------SYTF 53
M GPKRGI ALIEYDMRIK GEQE+ D+QLIDG G+++D +
Sbjct: 241 MTGPKRGIKFCSSALIEYDMRIKTGEQEEDDIQLIDGV-----LGIFDDLSKPSCKPFRS 295
Query: 54 RIPGDYGAVDITLSRLRWAAEATVEVVISEVQTSFDLLLGCITSGLDKEIRLFDGTITEP 113
RI G GAVDIT+ L A EA EV ISEVQ+ FDL + GL ++ ++F GTI E
Sbjct: 296 RIDGVGGAVDITVGLLPSAVEAIFEVSISEVQSCFDLTVCSYAGGLSQQFKIFQGTIGES 355
Query: 114 RGLKRSVVAVRMRSLIELNFKVGALSSSLDH--CCSFKPKYHGHDTRELKTAFALISVKV 171
GL+RSVVAV + ++ L F S DH CS + K HG T +L T A VKV
Sbjct: 356 CGLRRSVVAVMLDGMLHLRFIARRKGSKRDHEIACSIRAKKHGSSTHQLNTELASFLVKV 415
>Os08g0499400 Conserved hypothetical protein
Length = 386
Score = 126 bits (317), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 70/184 (38%), Positives = 110/184 (59%), Gaps = 9/184 (4%)
Query: 1 MAGPKRGIDMMDYALIEYDMRIKIGEQEKCDVQLIDGASLIGPAGLWNDSYTFRIPGDYG 60
++GPKRGI + + A+IEYD++IK GE EK D+QLIDG + ++ Y+ RI G +G
Sbjct: 199 LSGPKRGISLENPAVIEYDLKIKKGEDEKDDLQLIDGVAAFSDLTPFHGVYSRRIHGIHG 258
Query: 61 AVDITLSRLRWAAEATVEVVISE-VQTSFDLLLGCITSGLDKEIRLFDGTITEPRGLKRS 119
AVDI+L+ LR E+T+++ I + + L + C S + +EI+LFDGTI P L+
Sbjct: 259 AVDISLALLRNGKESTIQIKIPKLIHGGIHLSISCFVSQIPEEIKLFDGTIVNPSKLRNF 318
Query: 120 VVAVRMRSLIELNFKVGAL--------SSSLDHCCSFKPKYHGHDTRELKTAFALISVKV 171
VVAV++R+++ L+FK+ + S+ + C+FK H + ++ FA I V V
Sbjct: 319 VVAVQLRTVLILDFKITPVVAAAGENGSNQIHRYCAFKATTHAGSIQRIQHYFANIDVHV 378
Query: 172 CLFD 175
D
Sbjct: 379 VWSD 382
>Os04g0452300
Length = 201
Score = 125 bits (315), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 64/108 (59%), Positives = 80/108 (74%)
Query: 3 GPKRGIDMMDYALIEYDMRIKIGEQEKCDVQLIDGASLIGPAGLWNDSYTFRIPGDYGAV 62
GPKRGID+ L+EYDMRIK GE+++ D+QLIDG S + ++ RI GDYGAV
Sbjct: 82 GPKRGIDLSRAVLVEYDMRIKTGERDENDLQLIDGVSCVNEILTSSNPVINRIHGDYGAV 141
Query: 63 DITLSRLRWAAEATVEVVISEVQTSFDLLLGCITSGLDKEIRLFDGTI 110
DIT + L +A EATV+VVISEVQT F+L +GC TSGL +EI+LFDG I
Sbjct: 142 DITRACLDYAFEATVDVVISEVQTGFNLCVGCFTSGLHEEIQLFDGVI 189
>Os11g0130600 Conserved hypothetical protein
Length = 296
Score = 124 bits (310), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 82/177 (46%), Positives = 105/177 (59%), Gaps = 7/177 (3%)
Query: 1 MAGPKRGIDMMDYALIEYDMRIKIGEQEKCDVQLIDGASLIGPAGLWNDSYTFRIPGDYG 60
M GPKRGI LIE+DM+IK GE D QLIDGA + L N +T RI GD G
Sbjct: 115 MPGPKRGIGNQARVLIEFDMKIKNGETRDDDFQLIDGAIICSEFVLPNRVFTQRIEGDCG 174
Query: 61 AVDITLSRLRWAAEATVEVVISEVQ-TSFDLLLGCITSGLDKEIRLFDGTITEPRGLKRS 119
AVDI+L+ L EATV+V IS+V F L L TS + ++I+LFDG I++P L R
Sbjct: 175 AVDISLALLHSTVEATVQVSISQVHGNGFSLSLYSYTSRIPEKIQLFDGFISKPCDLNRF 234
Query: 120 VVAVRMRSLIELNFKVGALSSSLDH---CCSFKPKYHG--HDTRELKTAFALISVKV 171
VVAV + + + L FK+ S DH CC+FK + HG +D +ELK I VK+
Sbjct: 235 VVAVVVNTPLILIFKIDKRDGS-DHVPGCCAFKARTHGYEYDMQELKLGCTNILVKL 290
>Os12g0127500 Conserved hypothetical protein
Length = 364
Score = 110 bits (275), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 77/193 (39%), Positives = 101/193 (52%), Gaps = 22/193 (11%)
Query: 1 MAGPKRGIDMMDYALIEYDMRIKIGEQEKCDVQLIDGASLIGPAGLWNDSYTFRIPGDYG 60
M+GPKRGI LIE+DM+IK GE + D QLIDGA + L + +T RI GD G
Sbjct: 166 MSGPKRGIGNQVRVLIEFDMKIKNGETQDDDFQLIDGAIICSEFVLPDRVFTQRIEGDCG 225
Query: 61 AVDITLSRLRWAAEATVEVVISEVQTS-FDLLLGCITSGLDKEIRLFDGTITEPRGLKRS 119
AVDI+ + A EAT++V IS+V + L L TS + ++IRLFDG I++P L R
Sbjct: 226 AVDISRALFHEAVEATIQVSISQVHVNGLSLSLYSYTSRIPEKIRLFDGVISKPCDLNRV 285
Query: 120 VVAVRMRSLI-------------------ELNFKV--GALSSSLDHCCSFKPKYHGHDTR 158
V V L L FKV G S + C FK + HG+D +
Sbjct: 286 VAVVENTPLFLIFRAVHRDGSDYDIPKYCPLVFKVDQGDGSYRVSEYCPFKARRHGYDMK 345
Query: 159 ELKTAFALISVKV 171
ELK A + +KV
Sbjct: 346 ELKLGGARVLLKV 358
>Os12g0228300 Conserved hypothetical protein
Length = 274
Score = 106 bits (264), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 67/158 (42%), Positives = 93/158 (58%), Gaps = 8/158 (5%)
Query: 1 MAGPKRGIDMMDYALIEYDMRIKIGEQEKCDVQLIDGASLI--GPAGLWNDSYTFRIPGD 58
M GPKRGI M+ + E+DMRIK GE+E+ D+QLID I + TFR+ GD
Sbjct: 114 MTGPKRGIGMVADVIFEFDMRIKNGEKEEDDLQLIDEIIEIDDNVVTMIGTPRTFRLSGD 173
Query: 59 YGAVDITLSRLRWAAEATVEVVISEVQTSFDLLLGCITSGL--DKEIRLFDGTITEPRGL 116
G VD++++ A EATVEV ISE+ FDL + + S L ++E +LF G I E GL
Sbjct: 174 CGPVDMSMAIFDNAVEATVEVAISELHYGFDLSISYVLSELEENREFQLFRGAIGESCGL 233
Query: 117 KRSVVAVRMRSLIELNFKVGALSSS----LDHCCSFKP 150
+R V+AV + +L+ L FKV S+ L+ C+ P
Sbjct: 234 RRFVIAVNLDTLMHLKFKVHKEGSNFVAPLNLSCTDAP 271
>Os03g0107500 Conserved hypothetical protein
Length = 896
Score = 105 bits (263), Expect = 1e-23, Method: Composition-based stats.
Identities = 60/132 (45%), Positives = 82/132 (62%), Gaps = 7/132 (5%)
Query: 1 MAGPKRGIDMMDYALIEYDMRIKIGEQEKCDVQLIDGASLIGPAGLWNDSYTFRIPGDYG 60
M GPKRGI ++ L E+DMRIK GE+E+ D+QLIDG + + YT RI GD G
Sbjct: 734 MTGPKRGIALIPECLFEFDMRIKTGEKEEDDLQLIDGMIELDEMRMPETPYTTRINGDSG 793
Query: 61 AVDITLSRLRWAAEATVEVVISEVQTS-FDLLLGCITSGL------DKEIRLFDGTITEP 113
+VD+ L+ + EATVEVVISE+ + FDL + C+ S KE ++F G+I E
Sbjct: 794 SVDLCLANVSNGVEATVEVVISELMVNGFDLSISCVVSSSRYEYDESKEFQIFGGSIGEA 853
Query: 114 RGLKRSVVAVRM 125
GL+R V+AV +
Sbjct: 854 CGLRRFVLAVYL 865
>Os11g0130700
Length = 204
Score = 104 bits (260), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 73/193 (37%), Positives = 98/193 (50%), Gaps = 23/193 (11%)
Query: 1 MAGPKRGIDMMDYALIEYDMRIKIGEQEKCDVQLIDGASLIGPAGLWNDSYTFRIPGDYG 60
M+GPKRGI LIE+DM+IK GE + D QLIDGA + L + +T RI GD
Sbjct: 1 MSGPKRGIGNQVRVLIEFDMKIKNGETQDDDFQLIDGAIICSEFVLPDRVFTQRIEGDCD 60
Query: 61 AVDITLSRLRWAAEATVEVVISEVQ-TSFDLLLGCITSGLDKEIRLFDGTITEPRGLKRS 119
AVDI+ + A EAT++V IS+V L L + ++IRLFDG I++P L R
Sbjct: 61 AVDISRALFHEAVEATIQVSISQVHDNGLSLSLYSYIGQIPEKIRLFDGVISKPCDLDRF 120
Query: 120 VVAVRMRSLIELNFKV----------------------GALSSSLDHCCSFKPKYHGHDT 157
VVAV + + L FK G S + C FK + HG+D
Sbjct: 121 VVAVVENTPLFLIFKAVHRDGSDYDIPKYCPLVFKVDQGDGSYRVSEYCPFKARRHGYDM 180
Query: 158 RELKTAFALISVK 170
+ELK A + +K
Sbjct: 181 KELKLGGARVLLK 193
>Os12g0107800
Length = 390
Score = 98.6 bits (244), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 61/142 (42%), Positives = 91/142 (64%), Gaps = 7/142 (4%)
Query: 1 MAGPKRGIDMMDYALIEYDMRIKIGEQEKCDVQLIDGASLIGPAGL---WNDSYTFRIPG 57
++GPKRG M AL+EYD+RIK G+ E D+QLIDGA+ I L + +YT RI G
Sbjct: 190 LSGPKRGFGMETPALLEYDIRIKRGDGEDDDLQLIDGAATISETELPPPYAQAYTRRIAG 249
Query: 58 DYGAVDITLSRLRWAAEATVEVVISEVQTS--FDLLLGCITSGLDKEIRLFDG-TITEPR 114
+YG+V+I+L+ L A EAT+ + I+EV+ S F++ + C + EI+LF+ I +P
Sbjct: 250 NYGSVNISLALLHNAIEATMHIQITEVRGSGGFNMSMACRVGQIPDEIKLFESVAIAKPC 309
Query: 115 GL-KRSVVAVRMRSLIELNFKV 135
L KR V+A+ R ++ L+ KV
Sbjct: 310 QLNKRFVLAIVKRGILVLDLKV 331
>Os11g0107800
Length = 362
Score = 93.6 bits (231), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 62/148 (41%), Positives = 90/148 (60%), Gaps = 10/148 (6%)
Query: 1 MAGPKRGIDMMDYALIEYDMRIKIGEQEKCDVQLIDGASLIGPAGL---WNDSYTFRIPG 57
++GPKRGI M AL+EYD+RIK G+ E D+QLID A+ I L + +YT I G
Sbjct: 110 LSGPKRGIGMETPALLEYDIRIKRGDGEDDDLQLIDRAATISETELPLPYAQAYTRWIAG 169
Query: 58 DYGAVDITLSRLRWAAEATVEVVISEVQTS--FDLLLGCITSGLDKEIRLFDGTITEP-- 113
DYGA++I+L+ L A EAT+ + I+EV+ S FD+ + C + EI+LF+
Sbjct: 170 DYGAMNISLALLHNAIEATMHIQITEVRGSGGFDMSMACRVGQIPNEIKLFESVAIAKLC 229
Query: 114 RGLKRSVVAVRMRSLIELNFKV---GAL 138
+ KR V+A+ R ++ L+ KV GAL
Sbjct: 230 QLNKRFVLAIVKRGILVLDLKVKRSGAL 257
>Os09g0442000
Length = 395
Score = 92.4 bits (228), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 53/143 (37%), Positives = 88/143 (61%), Gaps = 9/143 (6%)
Query: 1 MAGPKRGIDMMDYALIEYDMRIKIGEQEKCDVQLIDGASLIGPAGLWNDSYTFRIPGDYG 60
M+GPKRGI + + ALIEYD++IK GE+EK D S + P ++ Y+ RI G +G
Sbjct: 194 MSGPKRGISLQNPALIEYDLKIKKGEEEKDDF-----FSDLTP---FHGVYSRRIHGIHG 245
Query: 61 AVDITLSRLRWAAEATVEV-VISEVQTSFDLLLGCITSGLDKEIRLFDGTITEPRGLKRS 119
VDI+L+ +R E T++V ++ + L L C+ + +EI+LFDG + +P L
Sbjct: 246 TVDISLALIRDGKEGTIQVRILRLINDGIHLSLSCLVHQIPEEIKLFDGIVAKPSYLGDF 305
Query: 120 VVAVRMRSLIELNFKVGALSSSL 142
VVA +R+++ L+FK+ + +++
Sbjct: 306 VVAAPLRTVLILDFKITPVGAAV 328
>Os12g0211100 Conserved hypothetical protein
Length = 675
Score = 92.0 bits (227), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 59/139 (42%), Positives = 81/139 (58%), Gaps = 5/139 (3%)
Query: 1 MAGPKRGIDMMDYALIEYDMRIKIGEQEKCDVQLIDGASLIGPAGLWNDSYTFRIPGDYG 60
M GPKRGI M +IEYD+RIK GE E+ D+ LIDGA+ + Y +RI GD G
Sbjct: 200 MTGPKRGITMNSRVMIEYDLRIKRGENEQDDLVLIDGAATFSEITNFI-PYIYRIHGDCG 258
Query: 61 -AVDITLSRLRWAAEATVEVVISEVQT---SFDLLLGCITSGLDKEIRLFDGTITEPRGL 116
AVDITL+ A EAT++V I E++ S +L + C S + +I+LF G I + R
Sbjct: 259 MAVDITLAHFILAIEATLQVRIYELKDGCGSLNLTITCRVSHMTPQIKLFQGPIDKLRDQ 318
Query: 117 KRSVVAVRMRSLIELNFKV 135
R VV + +L+ FK+
Sbjct: 319 NRFVVVATLNTLMITEFKL 337
>Os12g0211000 Conserved hypothetical protein
Length = 387
Score = 89.7 bits (221), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 56/139 (40%), Positives = 81/139 (58%), Gaps = 5/139 (3%)
Query: 1 MAGPKRGIDMMDYALIEYDMRIKIGEQEKCDVQLIDGASLIGPAGLWNDSYTFRIPGDYG 60
M GPKRGI M +IEYDMRIK+GE E+ D+ L+DGA+ + Y +RI GD G
Sbjct: 206 MTGPKRGIAMNARVMIEYDMRIKMGESEQDDLLLVDGAATFSEITNFI-PYIYRINGDCG 264
Query: 61 -AVDITLSRLRWAAEATVEVVISEVQT---SFDLLLGCITSGLDKEIRLFDGTITEPRGL 116
AVDI L+ A EAT +V + +++ S +L + C S + +I+LF G I +
Sbjct: 265 MAVDIRLAHFSRAIEATAQVWVYKLKDGCGSLNLTITCHVSYMPPQIKLFQGPIDKLGDQ 324
Query: 117 KRSVVAVRMRSLIELNFKV 135
R VVA ++ +L+ FK+
Sbjct: 325 NRFVVAAKLNTLMITEFKL 343
>Os08g0496700
Length = 815
Score = 81.3 bits (199), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 39/87 (44%), Positives = 61/87 (70%)
Query: 1 MAGPKRGIDMMDYALIEYDMRIKIGEQEKCDVQLIDGASLIGPAGLWNDSYTFRIPGDYG 60
++GPKRG+ + + A+IEYD++IK GE+E+ D+QLIDG ++ ++ YT RI G +G
Sbjct: 195 LSGPKRGVSLQNPAMIEYDLKIKRGEEEQDDLQLIDGVAVFSDLTPFHGVYTQRIHGVHG 254
Query: 61 AVDITLSRLRWAAEATVEVVISEVQTS 87
AVDI+L+ LR E T+E+ + E+ S
Sbjct: 255 AVDISLALLREGMECTIEIRVPEMDGS 281
>Os08g0496650
Length = 187
Score = 73.2 bits (178), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 43/112 (38%), Positives = 68/112 (60%), Gaps = 3/112 (2%)
Query: 3 GPKRGIDM--MDYALIEYDMRIKIGEQEKCDVQLIDGASLIGPAGLWNDSYTFRIPGDYG 60
GPKR + +IEYD+++K GE+E+ D+QLI+G + ++ Y+ RI G +G
Sbjct: 63 GPKRDTSRCRIPPCMIEYDLKMKRGEEEQDDLQLINGVAAFSDLSPFHGVYSQRIHGVHG 122
Query: 61 AVDITLSRLRWAAEATVEVVISEVQTSFDLLLGCITSGLDKEIRLFDGTITE 112
AVDI+L+ LR E T+E+ + +V D+ L S + ++I+LFD TI E
Sbjct: 123 AVDISLALLREGMECTIEIRVPKVDDG-DIHLLVFVSQIPQKIKLFDCTIAE 173
Database: rap3
Posted date: Nov 19, 2010 6:03 PM
Number of letters in database: 17,035,801
Number of sequences in database: 52,214
Lambda K H
0.324 0.140 0.420
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 52214
Number of Hits to DB: 5,572,379
Number of extensions: 199010
Number of successful extensions: 448
Number of sequences better than 1.0e-10: 21
Number of HSP's gapped: 421
Number of HSP's successfully gapped: 21
Length of query: 178
Length of database: 17,035,801
Length adjustment: 94
Effective length of query: 84
Effective length of database: 12,127,685
Effective search space: 1018725540
Effective search space used: 1018725540
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 152 (63.2 bits)