Os12g0228300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os12g0228300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = atmosphere,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 96.41 | 0.461 | 3.06 | 0.137 | 0.0115 | 5.29 | 0.52 | 18.4 | 0.147 | 12.2 | 995 | 5632 | -- | -- |
| 103.56 | 0.474 | 2.99 | -0.0402 | 0.015 | 0.655 | 0.326 | -- | 0.175 | 7.85 | 997.6 | 5839 | -- | -- |
| 97.51 | 0.46 | 3.06 | 0.172 | 0.0276 | 5.58 | -- | 19.3 | 0.147 | 7.3 | 995 | 6089 | -- | -- |
| 103.88 | 0.475 | 3 | -0.0287 | 0.0263 | 0.65 | -- | -- | 0.153 | 6.45 | 997.5 | 5825 | -- | -- |
| 97.52 | 0.46 | 3.06 | 0.184 | -- | 5.86 | -- | 20.4 | 0.145 | -- | 995 | 6089 | -- | -- |
| 106.41 | 0.484 | 3.01 | -0.0422 | 0.0161 | -- | 0.556 | -- | 0.123 | 12 | -- | -- | -- | -- |
| 107.71 | 0.486 | 3.01 | -0.021 | 0.0306 | -- | -- | -- | 0.125 | 7.85 | -- | -- | -- | -- |
| 103.9 | 0.475 | 3 | -0.0253 | -- | 0.655 | -- | -- | 0.152 | -- | 997.5 | 5825 | -- | -- |
| 103.89 | 0.475 | 3 | -- | 0.0239 | 0.655 | -- | -- | 0.156 | 7.01 | 997.5 | 5825 | -- | -- |
| 107.76 | 0.485 | 3.01 | -0.0207 | -- | -- | -- | -- | 0.126 | -- | -- | -- | -- | -- |
| 107.72 | 0.486 | 3.01 | -- | 0.0305 | -- | -- | -- | 0.128 | 7.9 | -- | -- | -- | -- |
| 103.92 | 0.475 | 3 | -- | -- | 0.656 | -- | -- | 0.156 | -- | 997.5 | 5825 | -- | -- |
| 107.78 | 0.485 | 3.01 | -- | -- | -- | -- | -- | 0.128 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 88.99 | radiation | 1.0 | 4320 | < th | dose dependent | rect. | 23 | 1 |
| 2 | 89.95 | atmosphere | 995.0 | 4320 | < th | dose independent | rect. | 14 | 1 |
| 11 | 89.95 | atmosphere | 995.0 | 4320 | < th | dose dependent | rect. | 15 | 1 |
| 95 | 90.85 | atmosphere | 995.0 | 4320 | > th | dose independent | rect. | 10 | 6 |
| 96 | 90.86 | atmosphere | 995.0 | 4320 | > th | dose independent | rect. | 8 | 8 |
| 100 | 91.03 | atmosphere | 995.0 | 4320 | > th | dose independent | rect. | 14 | 2 |
| 116 | 91.37 | atmosphere | 995.0 | 4320 | > th | dose independent | rect. | 4 | 10 |
| 263 | 95.74 | radiation | 1.0 | 4320 | < th | dose dependent | rect. | 19 | 8 |
| 271 | 96.28 | radiation | 1.0 | 4320 | < th | dose dependent | rect. | 23 | 3 |
| 272 | 96.39 | wind | 7.0 | 4320 | > th | dose independent | rect. | 5 | 2 |
| 273 | 96.40 | wind | 7.0 | 4320 | > th | dose dependent | rect. | 6 | 1 |
| 280 | 96.61 | radiation | 1.0 | 4320 | < th | dose dependent | rect. | 1 | 1 |
| 283 | 96.96 | atmosphere | 1000.0 | 10 | < th | dose independent | rect. | 10 | 2 |
| 299 | 97.21 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 20 | 1 |
| 315 | 98.37 | atmosphere | 1000.0 | 10 | < th | dose independent | rect. | 8 | 5 |
| 351 | 98.97 | atmosphere | 995.0 | 4320 | < th | dose dependent | sin | 5 | NA |
| 352 | 98.99 | atmosphere | 995.0 | 4320 | > th | dose independent | sin | 7 | NA |
| 363 | 99.36 | wind | 7.0 | 4320 | < th | dose independent | rect. | 6 | 1 |
| 369 | 99.50 | wind | 7.0 | 4320 | > th | dose dependent | rect. | 18 | 1 |
| 375 | 99.59 | atmosphere | 995.0 | 4320 | < th | dose independent | sin | 6 | NA |
| 384 | 99.72 | atmosphere | 1000.0 | 10 | < th | dose independent | rect. | 4 | 9 |
| 385 | 99.72 | atmosphere | 1005.0 | 90 | < th | dose dependent | rect. | 9 | 3 |
| 398 | 99.92 | atmosphere | 1005.0 | 90 | < th | dose dependent | rect. | 10 | 1 |
| 419 | 100.10 | atmosphere | 1005.0 | 10 | < th | dose dependent | rect. | 10 | 2 |
| 441 | 100.29 | atmosphere | 1005.0 | 10 | < th | dose dependent | rect. | 12 | 1 |
| 449 | 100.37 | wind | 7.0 | 4320 | > th | dose independent | rect. | 18 | 1 |
| 474 | 100.58 | atmosphere | 1005.0 | 10 | < th | dose dependent | rect. | 8 | 5 |
| 494 | 100.77 | radiation | 20.0 | 10 | < th | dose independent | rect. | 12 | 1 |
| 524 | 101.26 | atmosphere | 1000.0 | 10 | > th | dose independent | sin | 2 | NA |
| 526 | 101.26 | atmosphere | 1000.0 | 30 | < th | dose independent | sin | 2 | NA |
| 562 | 101.42 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 8 | 1 |
| 563 | 101.42 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 8 | 1 |
| 568 | 101.45 | atmosphere | 1000.0 | 30 | > th | dose independent | rect. | 3 | 23 |
| 658 | 101.71 | atmosphere | 1000.0 | 90 | > th | dose independent | rect. | 3 | 12 |
| 705 | 101.80 | wind | 9.0 | 4320 | < th | dose independent | rect. | 18 | 1 |
| 838 | 102.09 | wind | 1.0 | 10 | < th | dose dependent | rect. | 2 | 1 |
| 996 | 102.20 | atmosphere | 1005.0 | 270 | < th | dose independent | rect. | 8 | 1 |
| 999 | 102.20 | atmosphere | 995.0 | 4320 | < th | dose dependent | no | NA | NA |