Os07g0646600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os07g0646600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = > th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 43.16 | 0.309 | 11 | -1.49 | 1.35 | 2.71 | 0.105 | -2.21 | -0.584 | 8.61 | 9.834 | 713 | -- | -- |
| 46.32 | 0.317 | 10.9 | -1.11 | 1.36 | 2.69 | 0.576 | -- | -0.481 | 8.62 | 8.212 | 712 | -- | -- |
| 43.19 | 0.306 | 11 | -1.5 | 1.35 | 2.71 | -- | -2.29 | -0.589 | 8.61 | 9.57 | 712 | -- | -- |
| 47.36 | 0.321 | 10.9 | -1.09 | 1.36 | 2.68 | -- | -- | -0.478 | 8.59 | 8.483 | 712 | -- | -- |
| 79.65 | 0.416 | 11 | -1.53 | -- | 2.23 | -- | -1.82 | -0.578 | -- | 5.772 | 1443 | -- | -- |
| 137.01 | 0.549 | 10.8 | -0.424 | 0.723 | -- | 0.267 | -- | -0.0666 | 8.76 | -- | -- | -- | -- |
| 137.24 | 0.549 | 10.8 | -0.416 | 0.724 | -- | -- | -- | -0.0668 | 8.7 | -- | -- | -- | -- |
| 82.45 | 0.423 | 10.9 | -1.12 | -- | 2.21 | -- | -- | -0.472 | -- | 2.91 | 1459 | -- | -- |
| 75.42 | 0.404 | 10.9 | -- | 1.35 | 2.46 | -- | -- | -0.356 | 8.25 | 14.2 | 615 | -- | -- |
| 166.84 | 0.604 | 10.8 | -0.414 | -- | -- | -- | -- | -0.0608 | -- | -- | -- | -- | -- |
| 141.8 | 0.557 | 10.8 | -- | 0.722 | -- | -- | -- | -0.0205 | 8.74 | -- | -- | -- | -- |
| 111.2 | 0.491 | 10.9 | -- | -- | 1.74 | -- | -- | -0.275 | -- | 6.813 | 1443 | -- | -- |
| 171.36 | 0.611 | 10.8 | -- | -- | -- | -- | -- | -0.0149 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 38.16 | temperature | 15 | 720 | > th | dose dependent | rect. | 19 | 21 |
| 15 | 40.71 | temperature | 30 | 720 | < th | dose dependent | rect. | 22 | 21 |
| 35 | 41.88 | temperature | 10 | 720 | > th | dose dependent | rect. | 1 | 23 |
| 36 | 41.98 | temperature | 10 | 720 | > th | dose dependent | rect. | 10 | 23 |
| 40 | 42.16 | temperature | 30 | 720 | < th | dose dependent | rect. | 18 | 22 |
| 46 | 42.29 | temperature | 10 | 720 | > th | dose dependent | rect. | 12 | 23 |
| 77 | 43.01 | temperature | 30 | 720 | < th | dose dependent | rect. | 13 | 23 |
| 85 | 43.18 | temperature | 10 | 720 | > th | dose dependent | no | NA | NA |
| 96 | 43.48 | temperature | 30 | 720 | < th | dose dependent | no | NA | NA |
| 113 | 43.91 | temperature | 15 | 720 | > th | dose dependent | rect. | 23 | 23 |
| 136 | 44.55 | temperature | 15 | 720 | > th | dose dependent | rect. | 14 | 23 |
| 143 | 44.78 | temperature | 30 | 720 | < th | dose dependent | rect. | 6 | 23 |
| 354 | 48.20 | temperature | 10 | 1440 | > th | dose dependent | sin | 5 | NA |
| 768 | 49.26 | temperature | 30 | 1440 | < th | dose dependent | rect. | 1 | 15 |
| 772 | 49.28 | temperature | 30 | 1440 | < th | dose dependent | sin | 5 | NA |
| 895 | 49.68 | temperature | 10 | 1440 | > th | dose dependent | sin | 14 | NA |
| 968 | 49.98 | temperature | 30 | 1440 | < th | dose dependent | sin | 14 | NA |