Os12g0211000
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os12g0211000 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = humidity,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 73.92 | 0.404 | 3.81 | 1.27 | 0.544 | -0.025 | 1.06 | -2.27 | -0.252 | 20.3 | 69.88 | 4350 | -- | -- |
| 80.02 | 0.417 | 3.8 | 1.38 | 0.53 | -0.271 | 1.18 | -- | -0.15 | 20.2 | 75 | 5659 | -- | -- |
| 77.38 | 0.41 | 3.81 | 1.24 | 0.534 | -0.0156 | -- | -2.31 | -0.247 | 20.4 | 69.51 | 4376 | -- | -- |
| 83.44 | 0.425 | 3.78 | 1.34 | 0.548 | -0.351 | -- | -- | -0.103 | 20.5 | 76 | 5583 | -- | -- |
| 93.73 | 0.451 | 3.8 | 1.24 | -- | -0.0411 | -- | -2.24 | -0.259 | -- | 70 | 4376 | -- | -- |
| 81.52 | 0.423 | 3.81 | 1.39 | 0.539 | -- | 1.09 | -- | -0.226 | 20.2 | -- | -- | -- | -- |
| 85.16 | 0.432 | 3.81 | 1.36 | 0.537 | -- | -- | -- | -0.226 | 20.3 | -- | -- | -- | -- |
| 99.49 | 0.465 | 3.76 | 1.34 | -- | -0.331 | -- | -- | -0.102 | -- | 75.69 | 5721 | -- | -- |
| 125.92 | 0.523 | 3.81 | -- | 0.513 | -0.552 | -- | -- | -0.232 | 20.6 | 92 | 5935 | -- | -- |
| 101.15 | 0.47 | 3.79 | 1.35 | -- | -- | -- | -- | -0.232 | -- | -- | -- | -- | -- |
| 133.71 | 0.541 | 3.84 | -- | 0.531 | -- | -- | -- | -0.377 | 20.5 | -- | -- | -- | -- |
| 141.92 | 0.555 | 3.79 | -- | -- | -0.621 | -- | -- | -0.202 | -- | 91.31 | 5834 | -- | -- |
| 149.5 | 0.571 | 3.83 | -- | -- | -- | -- | -- | -0.382 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 68.66 | humidity | 80.0 | 4320 | < th | dose independent | rect. | 9 | 1 |
| 2 | 68.68 | humidity | 80.0 | 4320 | > th | dose independent | rect. | 9 | 1 |
| 4 | 69.37 | humidity | 90.0 | 4320 | > th | dose dependent | rect. | 8 | 1 |
| 5 | 69.68 | humidity | 80.0 | 4320 | < th | dose independent | rect. | 3 | 9 |
| 7 | 69.74 | humidity | 80.0 | 4320 | < th | dose independent | rect. | 22 | 14 |
| 12 | 69.84 | humidity | 80.0 | 4320 | > th | dose independent | rect. | 23 | 13 |
| 16 | 69.94 | humidity | 80.0 | 4320 | > th | dose independent | rect. | 3 | 9 |
| 36 | 70.35 | humidity | 70.0 | 4320 | > th | dose dependent | rect. | 3 | 9 |
| 38 | 70.36 | humidity | 70.0 | 4320 | > th | dose dependent | rect. | 9 | 1 |
| 94 | 70.84 | humidity | 90.0 | 4320 | < th | dose dependent | rect. | 23 | 12 |
| 107 | 70.90 | wind | 1.0 | 43200 | > th | dose independent | rect. | 4 | 3 |
| 111 | 70.93 | humidity | 80.0 | 4320 | < th | dose independent | sin | 6 | NA |
| 112 | 70.93 | wind | 5.0 | 4320 | > th | dose independent | rect. | 20 | 5 |
| 122 | 70.99 | humidity | 80.0 | 4320 | > th | dose independent | sin | 6 | NA |
| 134 | 71.04 | humidity | 90.0 | 4320 | < th | dose dependent | rect. | 2 | 9 |
| 175 | 71.24 | wind | 5.0 | 4320 | < th | dose independent | rect. | 20 | 5 |
| 204 | 71.36 | wind | 5.0 | 4320 | > th | dose dependent | rect. | 20 | 7 |
| 280 | 71.62 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 6 | 2 |
| 281 | 71.62 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 6 | 2 |
| 313 | 71.76 | humidity | 90.0 | 4320 | < th | dose dependent | rect. | 9 | 1 |
| 353 | 71.86 | humidity | 90.0 | 4320 | < th | dose dependent | sin | 7 | NA |
| 368 | 71.91 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 6 | 2 |
| 370 | 71.91 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 6 | 2 |
| 395 | 71.98 | wind | 5.0 | 4320 | < th | dose independent | rect. | 20 | 1 |
| 429 | 72.08 | humidity | 60.0 | 4320 | > th | dose dependent | sin | 5 | NA |
| 473 | 72.20 | wind | 1.0 | 43200 | < th | dose independent | rect. | 4 | 3 |
| 520 | 72.30 | wind | 3.0 | 4320 | > th | dose dependent | rect. | 20 | 1 |
| 579 | 72.42 | wind | 5.0 | 4320 | > th | dose independent | rect. | 20 | 1 |
| 646 | 72.51 | precipitation | 0.1 | 4320 | < th | dose independent | rect. | 4 | 6 |
| 648 | 72.51 | precipitation | 0.1 | 4320 | < th | dose dependent | rect. | 4 | 6 |
| 679 | 72.57 | radiation | 10.0 | 4320 | < th | dose dependent | rect. | 7 | 2 |
| 764 | 72.70 | radiation | 10.0 | 4320 | > th | dose independent | rect. | 8 | 2 |
| 765 | 72.70 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 4 | 6 |
| 858 | 72.81 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 4 | 6 |
| 894 | 72.88 | atmosphere | 1005.0 | 14400 | > th | dose independent | rect. | 23 | 1 |
| 917 | 72.91 | precipitation | 0.1 | 4320 | > th | dose independent | rect. | 3 | 10 |
| 937 | 72.93 | precipitation | 0.1 | 4320 | > th | dose dependent | rect. | 3 | 8 |
| 946 | 72.95 | wind | 7.0 | 4320 | > th | dose dependent | rect. | 21 | 1 |