Os11g0130600
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
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Os11g0130600 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
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Description : Conserved hypothetical protein.
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log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
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Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose independent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 51.98 | 0.339 | 8.57 | 0.314 | 0.408 | 0.268 | -0.19 | 1.42 | -0.0395 | 19.4 | 29.88 | 1263 | -- | -- |
| 52.25 | 0.337 | 8.52 | 0.606 | 0.399 | 0.423 | -0.251 | -- | 0.00972 | 19.4 | 29.73 | 1277 | -- | -- |
| 52.07 | 0.336 | 8.57 | 0.314 | 0.409 | 0.265 | -- | 1.44 | -0.0394 | 19.3 | 29.85 | 1260 | -- | -- |
| 52.32 | 0.337 | 8.52 | 0.613 | 0.41 | 0.426 | -- | -- | 0.00797 | 19.3 | 29.7 | 1264 | -- | -- |
| 60.8 | 0.363 | 8.56 | 0.299 | -- | 0.256 | -- | 1.47 | -0.0309 | -- | 29.8 | 1295 | -- | -- |
| 61.33 | 0.367 | 8.52 | 0.482 | 0.42 | -- | -0.1 | -- | 0.0398 | 18.8 | -- | -- | -- | -- |
| 61.35 | 0.367 | 8.52 | 0.483 | 0.42 | -- | -- | -- | 0.0397 | 18.7 | -- | -- | -- | -- |
| 61.18 | 0.364 | 8.52 | 0.616 | -- | 0.423 | -- | -- | -0.00163 | -- | 29.78 | 1326 | -- | -- |
| 61.89 | 0.366 | 8.54 | -- | 0.408 | 0.327 | -- | -- | -0.0518 | 19.3 | 29.78 | 1264 | -- | -- |
| 70.58 | 0.393 | 8.51 | 0.474 | -- | -- | -- | -- | 0.0314 | -- | -- | -- | -- | -- |
| 67.51 | 0.384 | 8.53 | -- | 0.415 | -- | -- | -- | -0.0142 | 18.8 | -- | -- | -- | -- |
| 70.63 | 0.391 | 8.53 | -- | -- | 0.318 | -- | -- | -0.0614 | -- | 29.78 | 1324 | -- | -- |
| 76.51 | 0.408 | 8.52 | -- | -- | -- | -- | -- | -0.0212 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
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Histogram 
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Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 51.44 | humidity | 70 | 4320 | < th | dose independent | rect. | 18 | 3 |
| 13 | 51.47 | temperature | 30 | 4320 | > th | dose dependent | rect. | 18 | 15 |
| 14 | 51.52 | humidity | 60 | 14400 | > th | dose independent | rect. | 17 | 1 |
| 15 | 51.66 | humidity | 70 | 4320 | < th | dose dependent | rect. | 18 | 3 |
| 27 | 51.67 | radiation | 10 | 1440 | > th | dose dependent | rect. | 16 | 17 |
| 28 | 51.69 | humidity | 50 | 4320 | > th | dose independent | rect. | 13 | 4 |
| 30 | 51.75 | radiation | 30 | 1440 | > th | dose independent | rect. | 15 | 19 |
| 31 | 51.76 | radiation | 30 | 1440 | < th | dose independent | rect. | 15 | 19 |
| 34 | 51.78 | radiation | 20 | 1440 | > th | dose dependent | rect. | 15 | 19 |
| 38 | 51.81 | temperature | 30 | 4320 | > th | dose dependent | rect. | 18 | 1 |
| 59 | 51.96 | humidity | 70 | 4320 | > th | dose independent | rect. | 18 | 3 |
| 61 | 51.96 | humidity | 70 | 4320 | > th | dose independent | rect. | 18 | 7 |
| 65 | 51.96 | radiation | 30 | 1440 | > th | dose dependent | rect. | 7 | 2 |
| 80 | 51.97 | humidity | 50 | 4320 | > th | dose independent | rect. | 15 | 5 |
| 90 | 51.98 | temperature | 30 | 1440 | < th | dose independent | rect. | 14 | 19 |
| 93 | 51.99 | humidity | 50 | 4320 | > th | dose independent | rect. | 15 | 11 |
| 97 | 51.99 | humidity | 50 | 4320 | > th | dose independent | rect. | 15 | 18 |
| 98 | 51.99 | temperature | 30 | 1440 | > th | dose independent | rect. | 14 | 19 |
| 106 | 52.00 | radiation | 20 | 1440 | > th | dose dependent | sin | 11 | NA |
| 124 | 52.02 | radiation | 20 | 4320 | > th | dose independent | rect. | 7 | 1 |
| 126 | 52.02 | radiation | 40 | 1440 | < th | dose dependent | rect. | 16 | 17 |
| 131 | 52.05 | radiation | 40 | 1440 | > th | dose independent | sin | 11 | NA |
| 140 | 52.08 | temperature | 30 | 1440 | < th | dose independent | rect. | 14 | 6 |
| 151 | 52.10 | temperature | 30 | 1440 | > th | dose independent | rect. | 14 | 5 |
| 221 | 52.13 | radiation | 40 | 1440 | > th | dose independent | rect. | 8 | 2 |
| 223 | 52.13 | radiation | 40 | 1440 | < th | dose independent | rect. | 7 | 3 |
| 245 | 52.15 | humidity | 60 | 14400 | < th | dose independent | rect. | 16 | 3 |
| 251 | 52.15 | humidity | 70 | 14400 | < th | dose dependent | rect. | 17 | 15 |
| 265 | 52.19 | radiation | 40 | 1440 | < th | dose independent | rect. | 24 | 10 |
| 278 | 52.20 | humidity | 60 | 4320 | > th | dose independent | rect. | 12 | 1 |
| 308 | 52.21 | humidity | 60 | 4320 | < th | dose dependent | rect. | 15 | 4 |
| 334 | 52.23 | wind | 1 | 1440 | > th | dose independent | rect. | 4 | 1 |
| 356 | 52.24 | humidity | 50 | 4320 | > th | dose independent | sin | 13 | NA |
| 366 | 52.25 | radiation | 30 | 1440 | < th | dose independent | sin | 12 | NA |
| 380 | 52.26 | temperature | 30 | 1440 | < th | dose independent | sin | 14 | NA |
| 422 | 52.27 | temperature | 25 | 1440 | > th | dose dependent | rect. | 8 | 1 |
| 437 | 52.29 | temperature | 30 | 1440 | > th | dose independent | sin | 13 | NA |
| 443 | 52.29 | temperature | 30 | 1440 | < th | dose independent | rect. | 18 | 22 |
| 500 | 52.32 | humidity | 60 | 4320 | < th | dose independent | rect. | 12 | 1 |
| 502 | 52.32 | humidity | 70 | 1440 | > th | dose independent | rect. | 17 | 19 |
| 528 | 52.34 | humidity | 60 | 14400 | < th | dose independent | rect. | 16 | 16 |
| 588 | 52.38 | humidity | 60 | 14400 | < th | dose independent | rect. | 16 | 6 |
| 590 | 52.38 | temperature | 30 | 1440 | < th | dose independent | rect. | 11 | 8 |
| 608 | 52.39 | temperature | 30 | 14400 | < th | dose independent | rect. | 18 | 9 |
| 677 | 52.41 | temperature | 30 | 1440 | < th | dose independent | rect. | 8 | 11 |
| 702 | 52.41 | temperature | 30 | 1440 | < th | dose independent | rect. | 1 | 19 |
| 714 | 52.41 | temperature | 30 | 1440 | > th | dose independent | rect. | 18 | 22 |
| 721 | 52.42 | temperature | 30 | 1440 | < th | dose independent | no | NA | NA |
| 723 | 52.42 | temperature | 30 | 14400 | < th | dose independent | rect. | 18 | 3 |
| 736 | 52.42 | temperature | 30 | 14400 | < th | dose independent | rect. | 18 | 14 |
| 826 | 52.44 | humidity | 60 | 14400 | > th | dose independent | rect. | 17 | 15 |
| 850 | 52.45 | humidity | 70 | 1440 | < th | dose independent | rect. | 16 | 20 |
| 880 | 52.47 | temperature | 30 | 1440 | < th | dose independent | rect. | 7 | 9 |
| 890 | 52.47 | radiation | 40 | 1440 | < th | dose dependent | rect. | 7 | 2 |
| 906 | 52.48 | temperature | 30 | 1440 | < th | dose independent | rect. | 15 | 2 |