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Os12g0127500

blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II

Description : Conserved hypothetical protein.


log2(Expression) ~ Norm(μ, σ2)

μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8

par. value (S.E.)
α : 9.46 (0.0156) R2 : 0.047
β1 : -- (--) R2dD : -- R2D : --
β2 : -- (--) R2dC : -- R2C : --
β3 : -- (--) R2dE : -- R2E : --
β4 : -- (--) R2dD*C : -- R2D*C : --
β5 : -- (--) R2dD*E : -- R2D*E : --
γ1 : -0.155 (0.0328) R2dN8 : 0.0607 R2N8 : 0.047
σ : 0.293
deviance : 39.4
__
_____
C
peak time of C : --
E
wheather : --
threshold : --
memory length : --
response mode : --
dose dependency : --
G
type of G : --
peak or start time of G : --
open length of G : --

__

Dependence on each variable

Residual plot

Process of the parameter reduction
(fixed parameters. wheather = humidity, response mode = < th, dose dependency = dose independent, type of G = no)

deviance σ α β1 β2 β3 β4 β5 γ1 peak time of C threshold memory length peak or start time of G open length of G
29.69 0.256 9.45 -0.0839 0.314 -0.515 0.179 0.831 -0.223 9.64 49.85 4399 -- --
30.14 0.256 9.47 -0.156 0.315 -0.268 0.175 -- -0.211 9.71 50 4436 -- --
29.81 0.254 9.45 -0.0807 0.315 -0.518 -- 0.826 -0.221 9.51 49.76 4404 -- --
30.11 0.256 9.46 -0.182 0.318 -0.346 -- -- -0.22 9.13 50 2682 -- --
35.45 0.277 9.45 -0.0606 -- -0.625 -- 0.995 -0.228 -- 49.19 3809 -- --
31.23 0.262 9.46 -0.252 0.327 -- 0.207 -- -0.183 9.87 -- -- -- --
31.39 0.262 9.46 -0.245 0.328 -- -- -- -0.183 9.71 -- -- -- --
32.58 0.266 9.46 -0.256 -- -0.371 -- -- -0.181 -- 73.64 817 -- --
30.81 0.259 9.47 -- 0.319 -0.36 -- -- -0.218 9.44 49 2733 -- --
37.78 0.287 9.47 -0.248 -- -- -- -- -0.183 -- -- -- -- --
32.97 0.269 9.45 -- 0.328 -- -- -- -0.156 9.77 -- -- -- --
33.52 0.27 9.46 -- -- -0.41 -- -- -0.138 -- 71.99 840 -- --
39.4 0.293 9.46 -- -- -- -- -- -0.155 -- -- -- -- --

Results of the grid search

Summarized heatmap of deviance
 Histogram

Local optima within top1000 grid-points

rank deviance wheather threshold memory length response mode dose dependency type of G peak or start time of G open length of G
1 27.39 radiation 40.0 10 < th dose dependent rect. 6 5
2 27.49 atmosphere 1000.0 10 > th dose independent rect. 20 10
3 27.50 temperature 10.0 10 > th dose dependent rect. 20 10
4 27.52 humidity 70.0 720 > th dose independent rect. 19 5
6 27.56 temperature 10.0 1440 > th dose independent rect. 21 9
9 27.56 temperature 30.0 1440 < th dose independent rect. 21 9
13 27.56 humidity 50.0 1440 > th dose independent rect. 21 9
19 27.56 atmosphere 995.0 1440 > th dose independent rect. 21 9
20 27.56 radiation 20.0 1440 < th dose independent rect. 21 9
29 27.56 temperature 10.0 1440 > th dose independent rect. 6 15
32 27.61 radiation 40.0 30 < th dose independent rect. 23 12
40 27.70 temperature 10.0 1440 > th dose independent rect. 6 4
43 27.70 atmosphere 995.0 1440 > th dose independent rect. 6 4
44 27.70 atmosphere 1015.0 1440 < th dose independent rect. 6 4
45 27.70 radiation 30.0 10 < th dose independent rect. 6 5
46 27.70 temperature 10.0 1440 > th dose independent rect. 10 20
50 27.79 radiation 20.0 10 < th dose independent rect. 6 3
51 27.87 wind 1.0 270 > th dose independent rect. 4 3
52 27.88 temperature 10.0 1440 > th dose independent rect. 6 6
55 27.88 atmosphere 995.0 1440 > th dose independent rect. 6 6
56 27.88 temperature 10.0 1440 > th dose independent rect. 12 18
61 27.94 wind 1.0 270 > th dose independent rect. 4 13
62 27.96 humidity 90.0 720 > th dose independent rect. 24 2
64 27.96 wind 1.0 30 > th dose independent rect. 23 10
65 27.98 humidity 90.0 10 < th dose independent rect. 4 5
70 28.00 radiation 30.0 10 < th dose dependent rect. 6 3
75 28.03 wind 1.0 90 > th dose independent rect. 4 5
76 28.03 humidity 90.0 10 < th dose independent rect. 2 7
78 28.03 temperature 10.0 1440 > th dose independent rect. 19 11
81 28.03 temperature 30.0 1440 < th dose independent rect. 19 11
85 28.03 humidity 50.0 1440 > th dose independent rect. 19 11
87 28.03 atmosphere 995.0 1440 > th dose independent rect. 19 11
88 28.03 radiation 20.0 1440 < th dose independent rect. 19 11
97 28.03 temperature 10.0 1440 > th dose independent rect. 6 13
100 28.04 radiation 40.0 720 < th dose independent rect. 19 14
101 28.05 humidity 70.0 720 > th dose independent rect. 19 14
103 28.07 wind 7.0 720 < th dose independent rect. 21 10
104 28.08 temperature 20.0 10 > th dose independent rect. 20 10
105 28.09 temperature 30.0 4320 > th dose dependent rect. 18 1
120 28.11 wind 1.0 10 > th dose independent rect. 23 12
123 28.13 humidity 50.0 720 > th dose dependent rect. 24 5
126 28.15 radiation 30.0 14400 < th dose independent rect. 17 13
127 28.15 radiation 1.0 720 > th dose dependent rect. 11 1
130 28.18 radiation 10.0 720 > th dose independent rect. 11 1
132 28.18 temperature 30.0 720 < th dose independent rect. 18 6
133 28.18 humidity 90.0 720 > th dose dependent rect. 1 1
135 28.19 radiation 40.0 10 < th dose independent rect. 6 14
136 28.19 wind 1.0 90 < th dose dependent rect. 4 1
138 28.20 humidity 50.0 4320 < th dose dependent rect. 16 1
139 28.20 humidity 50.0 10 > th dose dependent rect. 20 10
142 28.22 wind 7.0 720 < th dose independent rect. 21 3
146 28.22 temperature 25.0 30 > th dose independent rect. 1 8
150 28.24 humidity 50.0 1440 < th dose independent rect. 16 1
151 28.24 atmosphere 1000.0 720 > th dose independent rect. 17 2
152 28.24 humidity 90.0 270 < th dose independent rect. 4 3
157 28.25 temperature 25.0 270 > th dose independent rect. 15 10
163 28.27 wind 9.0 720 < th dose independent rect. 19 14
164 28.27 radiation 1.0 720 < th dose dependent rect. 17 7
167 28.29 temperature 25.0 30 > th dose independent rect. 3 6
170 28.29 humidity 60.0 10 > th dose independent rect. 23 12
171 28.29 temperature 15.0 720 > th dose independent rect. 19 14
177 28.31 wind 1.0 90 < th dose independent rect. 4 1
178 28.31 atmosphere 1005.0 10 > th dose independent rect. 6 3
181 28.31 radiation 10.0 10 < th dose independent rect. 20 10
182 28.31 radiation 40.0 10 < th dose dependent rect. 6 10
186 28.32 humidity 90.0 10 < th dose independent rect. 23 10
193 28.33 temperature 10.0 720 > th dose independent rect. 9 10
194 28.33 atmosphere 1015.0 720 < th dose independent rect. 9 10
196 28.33 humidity 50.0 720 > th dose independent rect. 19 14
197 28.33 atmosphere 995.0 720 > th dose independent rect. 19 14
200 28.34 temperature 25.0 270 > th dose independent rect. 2 6
205 28.34 humidity 50.0 10 > th dose dependent rect. 18 12
211 28.36 atmosphere 1010.0 10 < th dose independent rect. 20 10
213 28.36 wind 9.0 10 < th dose independent rect. 6 14
215 28.37 temperature 25.0 30 > th dose independent rect. 1 10
217 28.37 precipitation 0.1 720 < th dose independent rect. 24 19
219 28.37 precipitation 0.1 720 < th dose dependent rect. 24 19
220 28.38 temperature 25.0 270 > th dose independent sin 15 NA
222 28.38 temperature 25.0 270 < th dose independent rect. 15 9
225 28.38 temperature 10.0 720 > th dose dependent rect. 17 4
239 28.40 temperature 25.0 270 < th dose independent sin 15 NA
241 28.40 wind 9.0 720 < th dose independent rect. 19 5
266 28.40 temperature 10.0 1440 > th dose independent rect. 6 11
269 28.40 temperature 30.0 30 < th dose independent rect. 23 12
271 28.40 temperature 10.0 1440 > th dose independent rect. 17 13
274 28.40 radiation 30.0 1440 < th dose independent rect. 17 13
287 28.41 radiation 1.0 720 > th dose independent rect. 9 3
293 28.41 precipitation 0.1 10 < th dose independent rect. 6 14
296 28.41 precipitation 0.1 10 < th dose dependent rect. 6 14
303 28.43 precipitation 0.1 720 < th dose independent rect. 21 3
304 28.43 radiation 1.0 720 < th dose independent rect. 17 7
309 28.43 precipitation 0.1 720 < th dose dependent rect. 21 3
312 28.43 radiation 40.0 720 < th dose dependent rect. 21 10
313 28.44 temperature 10.0 720 > th dose independent rect. 9 3
314 28.44 atmosphere 995.0 720 > th dose independent rect. 9 3
315 28.44 atmosphere 1015.0 720 < th dose independent rect. 9 3
320 28.44 temperature 10.0 720 > th dose independent rect. 12 21
321 28.44 temperature 25.0 720 > th dose dependent rect. 18 1
322 28.44 radiation 1.0 720 > th dose dependent rect. 18 1
333 28.45 precipitation 0.1 720 < th dose independent rect. 9 3
334 28.45 radiation 40.0 720 < th dose independent rect. 3 6
335 28.45 wind 9.0 10 < th dose independent rect. 20 10
338 28.45 temperature 30.0 10 < th dose independent rect. 20 10
339 28.45 humidity 50.0 10 > th dose independent rect. 20 10
346 28.45 wind 5.0 30 < th dose independent rect. 23 12
347 28.45 temperature 10.0 10 > th dose independent rect. 6 14
349 28.45 atmosphere 1015.0 10 < th dose independent rect. 6 14
350 28.45 atmosphere 1015.0 10 < th dose independent rect. 9 21
351 28.45 precipitation 0.1 720 < th dose dependent rect. 9 3
352 28.45 atmosphere 1005.0 30 > th dose dependent rect. 6 5
353 28.45 wind 9.0 10 < th dose dependent rect. 20 10
354 28.46 wind 5.0 10 < th dose independent rect. 6 3
355 28.46 temperature 10.0 720 > th dose independent rect. 21 3
356 28.46 temperature 30.0 720 < th dose independent rect. 21 3
357 28.46 humidity 50.0 720 > th dose independent rect. 21 3
360 28.46 atmosphere 995.0 720 > th dose independent rect. 21 3
361 28.46 radiation 1.0 720 < th dose independent rect. 21 3
366 28.46 temperature 10.0 720 > th dose independent rect. 19 5
368 28.46 humidity 50.0 720 > th dose independent rect. 19 5
369 28.46 atmosphere 995.0 720 > th dose independent rect. 19 5
370 28.46 radiation 1.0 720 < th dose independent rect. 19 5
380 28.46 temperature 10.0 720 > th dose independent rect. 24 19
381 28.46 temperature 10.0 720 > th dose independent rect. 24 21
382 28.46 radiation 1.0 720 < th dose dependent rect. 21 3
387 28.46 radiation 1.0 720 < th dose dependent rect. 19 5
393 28.47 temperature 25.0 720 < th dose independent rect. 23 1
399 28.47 precipitation 0.1 720 < th dose independent rect. 24 21
401 28.47 temperature 10.0 10 > th dose dependent rect. 6 3
404 28.47 precipitation 0.1 720 < th dose dependent rect. 24 21
405 28.48 wind 1.0 10 > th dose independent rect. 6 3
410 28.48 precipitation 0.1 720 < th dose independent rect. 7 5
413 28.48 temperature 15.0 10 > th dose independent rect. 9 21
416 28.48 precipitation 0.1 720 < th dose dependent rect. 7 5
418 28.48 humidity 50.0 90 > th dose dependent rect. 18 11
420 28.49 atmosphere 1005.0 10 > th dose independent rect. 6 5
422 28.49 wind 1.0 30 > th dose independent rect. 4 7
430 28.50 temperature 10.0 10 > th dose independent rect. 6 3
432 28.50 temperature 30.0 10 < th dose independent rect. 6 3
433 28.50 humidity 50.0 10 > th dose independent rect. 6 3
436 28.50 atmosphere 995.0 10 > th dose independent rect. 6 3
437 28.50 atmosphere 1015.0 10 < th dose independent rect. 6 3
444 28.50 atmosphere 1000.0 10 > th dose independent rect. 18 12
447 28.50 humidity 50.0 10 > th dose dependent rect. 6 3
450 28.51 radiation 1.0 720 > th dose independent rect. 18 1
452 28.51 wind 1.0 720 > th dose independent rect. 9 3
465 28.51 atmosphere 1015.0 720 < th dose independent rect. 7 14
471 28.52 precipitation 0.1 10 < th dose independent rect. 6 3
476 28.52 precipitation 0.1 720 < th dose independent rect. 24 12
479 28.52 precipitation 0.1 10 < th dose dependent rect. 6 3
484 28.52 radiation 40.0 10 < th dose dependent rect. 20 10
485 28.52 precipitation 0.1 720 < th dose dependent rect. 24 12
486 28.53 humidity 50.0 1440 > th dose independent rect. 16 1
491 28.53 wind 1.0 10 > th dose independent rect. 12 23
492 28.53 temperature 10.0 720 > th dose dependent rect. 17 2
493 28.53 atmosphere 1005.0 270 > th dose dependent rect. 4 3
494 28.53 atmosphere 995.0 10 > th dose dependent rect. 6 3
495 28.53 humidity 50.0 10 > th dose dependent rect. 6 5
496 28.53 humidity 50.0 10 > th dose dependent rect. 6 10
497 28.54 wind 5.0 720 < th dose independent rect. 23 1
500 28.54 atmosphere 995.0 4320 > th dose independent rect. 3 3
501 28.54 temperature 10.0 720 > th dose independent rect. 12 12
502 28.54 temperature 10.0 720 > th dose independent rect. 24 12
504 28.54 atmosphere 995.0 720 > th dose independent rect. 24 12
522 28.56 wind 9.0 720 < th dose independent rect. 9 3
523 28.56 humidity 60.0 10 > th dose independent rect. 6 5
525 28.56 radiation 40.0 10 < th dose independent rect. 6 18
536 28.57 precipitation 0.1 720 < th dose independent rect. 9 10
538 28.57 humidity 90.0 10 < th dose independent rect. 23 12
539 28.57 temperature 10.0 720 > th dose dependent rect. 5 2
540 28.57 wind 3.0 720 < th dose dependent rect. 24 5
541 28.57 atmosphere 1005.0 270 > th dose dependent rect. 3 5
546 28.57 precipitation 0.1 720 < th dose dependent rect. 9 10
548 28.58 humidity 80.0 720 < th dose independent rect. 11 1
555 28.58 wind 9.0 720 < th dose independent rect. 12 21
556 28.58 wind 9.0 10 < th dose dependent rect. 6 3
557 28.58 wind 9.0 720 < th dose dependent rect. 21 3
562 28.59 radiation 20.0 14400 < th dose independent rect. 1 5
563 28.59 wind 7.0 720 < th dose independent rect. 3 6
572 28.59 radiation 40.0 10 < th dose dependent rect. 6 20
574 28.60 wind 1.0 720 < th dose independent rect. 4 1
577 28.60 radiation 40.0 10 < th dose independent rect. 6 20
578 28.60 wind 3.0 720 < th dose dependent rect. 24 1
592 28.61 radiation 20.0 14400 < th dose independent rect. 3 3
593 28.61 atmosphere 1000.0 720 > th dose independent rect. 17 4
598 28.61 precipitation 0.1 10 < th dose independent rect. 20 10
602 28.61 wind 1.0 90 > th dose independent rect. 12 23
605 28.61 precipitation 0.1 10 < th dose dependent rect. 20 10
613 28.62 radiation 20.0 270 < th dose independent rect. 19 13
616 28.62 temperature 25.0 720 > th dose dependent rect. 18 3
624 28.63 humidity 90.0 90 > th dose dependent rect. 3 2
627 28.63 humidity 90.0 10 > th dose dependent rect. 1 5
634 28.64 wind 9.0 720 < th dose independent rect. 7 5
637 28.64 humidity 60.0 720 > th dose independent rect. 3 6
643 28.64 humidity 70.0 90 > th dose independent rect. 18 11
645 28.64 atmosphere 1000.0 10 > th dose independent rect. 11 19
646 28.64 atmosphere 995.0 720 > th dose independent rect. 17 19
647 28.64 radiation 20.0 10 < th dose independent rect. 6 20
651 28.64 humidity 90.0 90 > th dose dependent rect. 1 4
653 28.65 wind 5.0 720 < th dose independent rect. 17 2
658 28.65 humidity 70.0 10 > th dose independent rect. 18 12
660 28.65 wind 1.0 10 > th dose independent rect. 6 14
661 28.65 atmosphere 995.0 10 > th dose independent rect. 6 14
662 28.65 precipitation 0.1 10 < th dose independent rect. 9 21
665 28.65 temperature 25.0 720 > th dose dependent rect. 18 5
669 28.65 humidity 50.0 10 > th dose dependent rect. 6 12
671 28.65 precipitation 0.1 10 < th dose dependent rect. 9 21
674 28.66 humidity 50.0 1440 > th dose independent rect. 6 4
677 28.66 precipitation 0.1 720 < th dose independent rect. 19 5
690 28.66 wind 9.0 720 < th dose independent rect. 21 18
691 28.66 wind 9.0 720 < th dose independent rect. 12 19
693 28.66 atmosphere 1000.0 10 > th dose independent rect. 9 21
696 28.66 precipitation 0.1 720 < th dose dependent rect. 19 5
699 28.66 radiation 40.0 10 < th dose dependent rect. 23 12
701 28.67 temperature 10.0 720 > th dose independent rect. 23 1
703 28.67 humidity 50.0 720 > th dose independent rect. 23 1
706 28.67 atmosphere 995.0 720 > th dose independent rect. 23 1
707 28.67 radiation 1.0 720 < th dose independent rect. 23 1
712 28.67 precipitation 0.1 720 < th dose independent rect. 23 1
713 28.67 radiation 10.0 720 < th dose independent rect. 17 2
716 28.67 temperature 30.0 10 < th dose independent rect. 6 5
720 28.67 wind 9.0 720 < th dose independent rect. 12 12
722 28.67 wind 9.0 720 < th dose independent rect. 24 12
732 28.67 temperature 10.0 720 > th dose independent rect. 24 23
733 28.67 wind 1.0 43200 < th dose dependent rect. 1 1
734 28.67 radiation 1.0 720 < th dose dependent rect. 23 1
739 28.67 precipitation 0.1 720 < th dose dependent rect. 23 1
747 28.68 wind 1.0 720 > th dose independent rect. 11 1
748 28.68 temperature 10.0 720 > th dose independent rect. 11 1
750 28.68 atmosphere 995.0 720 > th dose independent rect. 11 1
751 28.68 atmosphere 1015.0 720 < th dose independent rect. 11 1
752 28.68 precipitation 0.1 720 < th dose independent rect. 11 1
754 28.68 temperature 25.0 30 > th dose independent rect. 6 3
768 28.68 radiation 40.0 10 < th dose independent rect. 6 12
775 28.68 temperature 10.0 720 > th dose independent rect. 12 23
777 28.68 temperature 30.0 720 < th dose dependent rect. 21 1
778 28.68 precipitation 0.1 720 < th dose dependent rect. 11 1
798 28.69 temperature 25.0 270 > th dose independent rect. 6 1
803 28.69 radiation 10.0 720 < th dose independent rect. 17 10
808 28.69 temperature 25.0 720 > th dose dependent rect. 20 1
813 28.70 temperature 10.0 30 > th dose independent rect. 11 12
815 28.70 temperature 10.0 30 > th dose independent rect. 23 12
817 28.70 atmosphere 995.0 30 > th dose independent rect. 23 12
818 28.70 atmosphere 1015.0 30 < th dose independent rect. 11 12
820 28.70 wind 9.0 10 < th dose independent rect. 9 21
823 28.70 temperature 20.0 10 > th dose dependent rect. 16 12
825 28.71 wind 9.0 1440 < th dose independent rect. 6 3
832 28.71 atmosphere 1015.0 1440 < th dose independent rect. 3 3
835 28.71 atmosphere 1015.0 720 < th dose independent rect. 3 6
845 28.71 humidity 50.0 720 > th dose dependent rect. 21 3
850 28.72 atmosphere 1015.0 1440 < th dose independent rect. 1 5
851 28.72 radiation 1.0 720 > th dose independent rect. 7 5
855 28.72 humidity 50.0 720 > th dose independent rect. 24 12
859 28.72 radiation 40.0 720 < th dose independent rect. 15 14
865 28.72 atmosphere 995.0 10 > th dose dependent rect. 20 10
881 28.74 wind 5.0 10 < th dose independent rect. 6 5
885 28.74 atmosphere 1015.0 720 < th dose independent rect. 15 6
887 28.74 radiation 40.0 720 < th dose independent rect. 15 6
888 28.74 wind 9.0 720 < th dose independent rect. 9 10
890 28.74 wind 7.0 30 < th dose independent rect. 23 10
897 28.74 precipitation 0.1 30 < th dose independent rect. 23 12
904 28.74 precipitation 0.1 30 < th dose dependent rect. 23 12
908 28.75 temperature 10.0 1440 > th dose independent rect. 1 5
912 28.75 temperature 30.0 1440 < th dose independent rect. 1 5
916 28.75 humidity 50.0 1440 > th dose independent rect. 1 5
926 28.75 atmosphere 995.0 1440 > th dose independent rect. 1 5
927 28.75 radiation 20.0 1440 < th dose independent rect. 1 5
936 28.75 wind 1.0 720 > th dose independent rect. 15 6
938 28.75 temperature 10.0 720 > th dose independent rect. 3 6
940 28.75 atmosphere 995.0 720 > th dose independent rect. 3 6
941 28.75 temperature 10.0 1440 > th dose independent rect. 24 10
944 28.75 atmosphere 995.0 1440 > th dose independent rect. 24 10
948 28.75 temperature 10.0 1440 > th dose independent rect. 10 14
951 28.75 temperature 10.0 720 > th dose independent rect. 9 18
952 28.75 temperature 10.0 1440 > th dose independent rect. 6 19
968 28.76 precipitation 0.1 30 < th dose independent rect. 11 12
971 28.76 atmosphere 1015.0 720 < th dose independent rect. 3 14
976 28.76 precipitation 0.1 30 < th dose dependent rect. 11 12
978 28.76 radiation 40.0 10 < th dose dependent rect. 6 18