Os07g0646300
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II
Description : Conserved hypothetical protein.
FiT-DB / Search/ Help/ Sample detail
|
Os07g0646300 |
blastp(Os)/ blastp(At)/ coex/// RAP/ RiceXPro/ SALAD/ ATTED-II |
|
Description : Conserved hypothetical protein.
|
|
log2(Expression) ~ Norm(μ, σ2)
μ = α + β1D + β2C + β3E + β4D*C + β5D*E + γ1N8
|
_____ |
|
__
Dependence on each variable
Residual plot
Process of the parameter reduction
(fixed parameters. wheather = temperature,
response mode = < th, dose dependency = dose dependent, type of G = no)
| deviance | σ | α | β1 | β2 | β3 | β4 | β5 | γ1 | peak time of C | threshold | memory length | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 37.37 | 0.287 | 8.85 | 0.739 | 0.514 | -1.9 | 0.876 | 0.169 | -0.0446 | 16.4 | 23.84 | 1192 | -- | -- |
| 37.3 | 0.284 | 8.84 | 0.748 | 0.52 | -1.97 | 0.888 | -- | -0.0304 | 16.4 | 23.47 | 1176 | -- | -- |
| 39.26 | 0.292 | 8.84 | 0.717 | 0.516 | -1.95 | -- | 0.271 | -0.0309 | 16.3 | 23.41 | 1165 | -- | -- |
| 39.31 | 0.292 | 8.84 | 0.759 | 0.516 | -2.02 | -- | -- | -0.0159 | 16.3 | 23.23 | 1175 | -- | -- |
| 44.11 | 0.309 | 8.85 | 0.756 | -- | -1.84 | -- | 1.24 | 0.00508 | -- | 33.38 | 415 | -- | -- |
| 84.8 | 0.432 | 8.76 | 1.33 | 0.43 | -- | 1.08 | -- | 0.321 | 17.1 | -- | -- | -- | -- |
| 87.76 | 0.439 | 8.76 | 1.33 | 0.438 | -- | -- | -- | 0.326 | 17.2 | -- | -- | -- | -- |
| 45.31 | 0.313 | 8.83 | 0.885 | -- | -1.83 | -- | -- | 0.0134 | -- | 32.3 | 412 | -- | -- |
| 49.11 | 0.326 | 8.86 | -- | 0.484 | -2.19 | -- | -- | -0.143 | 16 | 21.9 | 2575 | -- | -- |
| 97.81 | 0.462 | 8.75 | 1.31 | -- | -- | -- | -- | 0.315 | -- | -- | -- | -- | -- |
| 134.19 | 0.542 | 8.79 | -- | 0.416 | -- | -- | -- | 0.178 | 17.3 | -- | -- | -- | -- |
| 62.93 | 0.369 | 8.86 | -- | -- | -2.1 | -- | -- | -0.136 | -- | 21.9 | 2582 | -- | -- |
| 143.2 | 0.559 | 8.79 | -- | -- | -- | -- | -- | 0.169 | -- | -- | -- | -- | -- |
Results of the grid search
Summarized heatmap of deviance
|
Histogram 
|
Local optima within top1000 grid-points
| rank | deviance | wheather | threshold | memory length | response mode | dose dependency | type of G | peak or start time of G | open length of G |
|---|---|---|---|---|---|---|---|---|---|
| 1 | 34.83 | temperature | 15 | 720 | > th | dose dependent | rect. | 1 | 15 |
| 6 | 35.09 | temperature | 15 | 720 | > th | dose dependent | rect. | 23 | 17 |
| 16 | 35.47 | temperature | 30 | 720 | < th | dose dependent | rect. | 1 | 17 |
| 26 | 35.93 | temperature | 15 | 720 | > th | dose dependent | sin | 3 | NA |
| 40 | 36.33 | temperature | 30 | 720 | < th | dose dependent | sin | 2 | NA |
| 128 | 38.75 | temperature | 10 | 270 | > th | dose dependent | rect. | 1 | 23 |
| 143 | 39.10 | temperature | 25 | 1440 | < th | dose dependent | rect. | 3 | 9 |
| 328 | 40.37 | temperature | 25 | 1440 | < th | dose dependent | no | NA | NA |
| 330 | 40.38 | temperature | 15 | 270 | > th | dose dependent | rect. | 3 | 19 |
| 336 | 40.41 | temperature | 25 | 1440 | < th | dose dependent | rect. | 7 | 23 |
| 341 | 40.42 | temperature | 25 | 1440 | < th | dose dependent | rect. | 5 | 23 |
| 344 | 40.43 | temperature | 25 | 1440 | < th | dose dependent | rect. | 3 | 23 |
| 465 | 41.02 | temperature | 10 | 1440 | > th | dose dependent | rect. | 1 | 10 |
| 602 | 41.48 | temperature | 30 | 270 | < th | dose dependent | rect. | 6 | 23 |
| 782 | 41.91 | temperature | 10 | 720 | > th | dose dependent | rect. | 12 | 23 |
| 828 | 42.03 | temperature | 25 | 1440 | < th | dose dependent | rect. | 21 | 5 |
| 907 | 42.22 | temperature | 25 | 1440 | < th | dose dependent | rect. | 22 | 1 |
| 995 | 42.45 | temperature | 10 | 720 | > th | dose dependent | rect. | 14 | 23 |